Ecor008640.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- -
- Assembly
- GCA_947095575.1
- Location
- OX352716.1:165565-171530[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2e-07 0.0002 21.1 0.0 17 43 1 27 1 29 0.94 2 3 4.5 4e+03 -2.2 0.0 27 43 86 103 86 104 0.90 3 3 2.1e-14 1.9e-11 43.6 0.0 2 43 721 762 720 764 0.95
Sequence Information
- Coding Sequence
- ATGGGTATAAGAGAAGCCTGTCGGGTTTACGGTGTACCGAAAACAACTGTCCATGATCGACTCTCTGGGAAAGTTTCTGCCCACAAAAAACCCAAAGTAGGCCCAGACCCAGTTTTAGGTCACGAAGGTGAGCAAAAAGTCAAAAGCTGGGTACTGGATATGGCTAGATGTGGATTTCCGATAAATAAAAAAGAACTACTCGAGAGCGTATCAAAAATAATCCGCGATAGTGGAATCAAAACCCCTTTCAAGGATGGCATTCCCGGAGATACATGGTATTACGCATTTTTGAGGCGTCACCCTGACGTGAGTGTTCGTGAAGCAGAGGGAATCAATAATGCACGAGCAGCAATCACCGAGACTCGTATAAGGTGTTGGTTTAATGACTTGAGGGAATATATTAAATCCATAGATGCATTAGAtatatttgaagacccagttaggattttcaacggtgatgaaacaggattttctctgtgcccaaaaagcggtaaagttttggggcctaaaggttacaagaacctttatatgattaaaaaaaataaagataaagaaaatattaccgtgttggtggtatttacggcaagtggtaaggtttgtcctcctttagtggtgtttccttatataagaccacctaaagctcttgtcgatagtatgccagaatcttgggtacttggaagatcagagagtggttggatgagaagtgatgtgttctatgaatatgtctgcaatagtttcaatacttgggtaacacaacagggcatcaaaaaacctgttattcttttcatagacggacataagtcacatatgacgttatcgcttagccaattctgtgaagaaaatggaatcattctctatgctttaccagcaaacaccacacatatcctacagccggctgatgtaagtgtttttaagccgctaaagcaagaatggaagaaaacagtaaggaactggcaaggagaaaatgtaaaccaaaccataacgaaaataaatttttgcaagatattaaacgcgactttgacgacaattgacctggaagatgcaatagtaaatggattccgaaaatgtggattatatcctttgaatgaagatgctgtggattacacgaaatgtgtcaaagacactatacggaaaaTTCGTAATTCTAACCAAAACAAAAAGACGTTATCTGCAAAGGACTATGACACTGCCATTAATGTTATATCGTTCCTGCAGGAAAATATATCAAAACACAACATTGACACGAACATAATTTTCAGTGAAATAAACAAAGCTAAAACTAAATTCCTTGTAAATCGCCGTTCTAAATCTAAGACGCCGCGAAATTCTGCATCATCTAACCTGAGCAACAGTATACTTGCTGAAGAAATTGCAGTCGAAGTCCACACTGCAGATACCGCAGTCACACCAGAAAATTTAAGTTTCGAGGAGCCACTTACGTTGCCACAAGTTTCTGATATCCCTTCCTGTCAGAACATAGATAGTATTAATATATTGTCTGCAGAACTGACGACTGATGCAACGCTGCAACAATTTATTGCTGAAGAAAATATTGAGAATATAAGTTTTCCTAAGGCTGGATCGTTTATATCGCTAAACAATATCTCGATTGTGCCGTTTGAAGAAATCGAAATTTCTCAGAATATGAATAACACGCTTAATGACTCCTCTGAACCTGAAAATCAATGTCGTTCTTTCACGGTATCAGCCGATGTACATGAGCAACCAATCCCTGTGCTTCAAGAGATCACTCCAACCTACTCATTTGATCATGCTTTTGCGAGACACCTGCAATTTCCTGAACCCCCAGCACCAAAGGAGAAACTCAAGGGTCCTAAATTGCCGAGCGCTATTTCATCCAGCTCGTGGAGACAATATTACGAAAAGAAGGATGAAGAGAAAGAAAACCTTGCTAAAGAAAAGAATCGGAAACAACTGTTAAGAGCAGAGGTAAAAGAAAGAAAAGCTAAAGAGAAGGCAAGCAAAATACCCAGAAAGAAGAAAACAACAGTGACCTCTAAAAAGTCTGTTTTACAATGTAGCCAATGCTACGAAGATTTGATTAGCGATGTAGAAGACGAATCAGAAAAAAATATCGGTTGTGACAAATGCGTGGGGATAGCAAAGAAAAAGACTGGCAGACGTCTATTTGATTACGGAGAAGACGATCTCAATAACGCTATAGAAGCGATAAGAAATAAAAATATGGGTATAAGAGAAGCCTGTCGGGTTTACGGTGTACCGAAAACAACTGTCCATGATCGACTCTCTGGGAAAGTTTCTGCCCACAAAAAACCCAAAGTAGGCCCAGACCCAGTTTTAGGTCACGAAGGTGAGCAAAAAGTCAAAAGCTGGGTACTGGATATGGCTAGATGTGGATTTCCGATAAATAAAAAAGAACTACTCGAGAGCGTATCAAAAATAATCCGCGATAGTGGAATCAAAACCCCTTTCAAGGATGGCATTCCCGGAGATACATGGTATTACGCATTTTTGAGGCGTCACCCTGACGAAAATATATCAAAACACAACATTGACACGAACATAATTTTCAGTGAAATAAACAAAGCTAAAACTAAATTCCTTGTAAATCGCCGTTCTAAATCTAAGACGCCGCGAAATTCTGCATCATCTAACCTGAGCAACAGTATACTTGCTGAAGAAATTGCAGTCGAAGTCCACACTGCAGATACCGCAGTCACACCAGAAAATTTAAGTTTCGAGGAGCCACTTACGTTGCCACAAGTTTCTGATATCCCTTCCTGTCAGAACATAGATAGTATTAATATATTGTCTGCAGAACTGACGACTGATGCAACGCTGCAACAATTTATTGCTGAAGAAAATATTGAGAATATAAGTTTTCCTAAGGCTGGATCGTTTATATCGCTAAACAATATCTCGATTGTGCCGTTTGAAGAAATCGAAATTTCTCAGAATATGAATAACACGCTTAATGACTCCTCTGAACCTGAAAATCAATGTCGTTCTTTCACGGTATCAGCCGATGTACATGAGCAACCAATCCCTGTGCTTCAAGAGATCACTCCAACCTACTCATTTGATCATGCTTTTGCGAGACACCTGCAATTTCCTGAACCCCCAGCACCAAAGGAGAAACTCAAGGGTCCTAAATTGCCGAGCGCTATTTCATCCAGCTCGTGGAGACAATATTACGAAAAGAAGGATGAAGAGAAAGAAAACCTTGCTAAAGAAAAGAATCGGAAACAACTGTTAAGAGCAGAGGTAAAAGAAAGAAAAGCTAAAGAGAAGGCAAGCAAAATACCCAGAAAGAAGAAAACAACAGTGACCTCTAAAAAGTCTGTTTTACAATGTAGCCAATGCTACGAAGATTTGATTAGCGATGTAGAAGACGAATCAGAAAAAAATATCGGTTGTGACAAATGCGTGCGTTGGTACCATCTCAAGTGTACTATTTTTAAAAATTTGAGTTATGTAGAAGCAGCGTCAAATGATTATACATGTCAGTTTTGTGAAATTACCAAATAA
- Protein Sequence
- MGIREACRVYGVPKTTVHDRLSGKVSAHKKPKVGPDPVLGHEGEQKVKSWVLDMARCGFPINKKELLESVSKIIRDSGIKTPFKDGIPGDTWYYAFLRRHPDVSVREAEGINNARAAITETRIRCWFNDLREYIKSIDALDIFEDPVRIFNGDETGFSLCPKSGKVLGPKGYKNLYMIKKNKDKENITVLVVFTASGKVCPPLVVFPYIRPPKALVDSMPESWVLGRSESGWMRSDVFYEYVCNSFNTWVTQQGIKKPVILFIDGHKSHMTLSLSQFCEENGIILYALPANTTHILQPADVSVFKPLKQEWKKTVRNWQGENVNQTITKINFCKILNATLTTIDLEDAIVNGFRKCGLYPLNEDAVDYTKCVKDTIRKIRNSNQNKKTLSAKDYDTAINVISFLQENISKHNIDTNIIFSEINKAKTKFLVNRRSKSKTPRNSASSNLSNSILAEEIAVEVHTADTAVTPENLSFEEPLTLPQVSDIPSCQNIDSINILSAELTTDATLQQFIAEENIENISFPKAGSFISLNNISIVPFEEIEISQNMNNTLNDSSEPENQCRSFTVSADVHEQPIPVLQEITPTYSFDHAFARHLQFPEPPAPKEKLKGPKLPSAISSSSWRQYYEKKDEEKENLAKEKNRKQLLRAEVKERKAKEKASKIPRKKKTTVTSKKSVLQCSQCYEDLISDVEDESEKNIGCDKCVGIAKKKTGRRLFDYGEDDLNNAIEAIRNKNMGIREACRVYGVPKTTVHDRLSGKVSAHKKPKVGPDPVLGHEGEQKVKSWVLDMARCGFPINKKELLESVSKIIRDSGIKTPFKDGIPGDTWYYAFLRRHPDENISKHNIDTNIIFSEINKAKTKFLVNRRSKSKTPRNSASSNLSNSILAEEIAVEVHTADTAVTPENLSFEEPLTLPQVSDIPSCQNIDSINILSAELTTDATLQQFIAEENIENISFPKAGSFISLNNISIVPFEEIEISQNMNNTLNDSSEPENQCRSFTVSADVHEQPIPVLQEITPTYSFDHAFARHLQFPEPPAPKEKLKGPKLPSAISSSSWRQYYEKKDEEKENLAKEKNRKQLLRAEVKERKAKEKASKIPRKKKTTVTSKKSVLQCSQCYEDLISDVEDESEKNIGCDKCVRWYHLKCTIFKNLSYVEAASNDYTCQFCEITK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -