Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759258.1:6089192-6120898[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.62 81 5.4 0.9 2 19 489 506 488 510 0.90

2 14 0.0092 1.2 11.2 0.2 1 23 520 543 520 543 0.95

3 14 0.1 13 7.9 1.1 2 21 636 655 635 656 0.93

4 14 0.037 4.7 9.3 3.8 2 23 698 719 697 719 0.95

5 14 6.2 8e+02 2.3 1.5 1 23 731 755 731 755 0.86

6 14 2.4 3.1e+02 3.6 0.2 2 10 762 772 761 775 0.91

7 14 0.0035 0.45 12.5 2.9 1 23 810 832 810 832 0.98

8 14 0.078 10 8.2 0.3 2 20 843 861 843 863 0.91

9 14 0.059 7.6 8.6 0.2 1 23 942 964 942 964 0.96

10 14 2.1 2.7e+02 3.7 7.2 1 23 971 993 971 993 0.95

11 14 0.014 1.8 10.6 0.2 2 23 1076 1098 1075 1098 0.96

12 14 0.006 0.77 11.7 1.5 3 23 1125 1146 1124 1146 0.95

13 14 0.00031 0.04 15.8 1.2 1 23 1175 1197 1175 1197 0.96

14 14 0.51 66 5.7 0.1 1 13 1203 1215 1203 1217 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.62	81	5.4	0.9	2	19	489	506	488	510	0.90
2	14	0.0092	1.2	11.2	0.2	1	23	520	543	520	543	0.95
3	14	0.1	13	7.9	1.1	2	21	636	655	635	656	0.93
4	14	0.037	4.7	9.3	3.8	2	23	698	719	697	719	0.95
5	14	6.2	8e+02	2.3	1.5	1	23	731	755	731	755	0.86
6	14	2.4	3.1e+02	3.6	0.2	2	10	762	772	761	775	0.91
7	14	0.0035	0.45	12.5	2.9	1	23	810	832	810	832	0.98
8	14	0.078	10	8.2	0.3	2	20	843	861	843	863	0.91
9	14	0.059	7.6	8.6	0.2	1	23	942	964	942	964	0.96
10	14	2.1	2.7e+02	3.7	7.2	1	23	971	993	971	993	0.95
11	14	0.014	1.8	10.6	0.2	2	23	1076	1098	1075	1098	0.96
12	14	0.006	0.77	11.7	1.5	3	23	1125	1146	1124	1146	0.95
13	14	0.00031	0.04	15.8	1.2	1	23	1175	1197	1175	1197	0.96
14	14	0.51	66	5.7	0.1	1	13	1203	1215	1203	1217	0.87

Sequence Information

Coding Sequence: ATGTCTGAGCCCCAGCCTCCAGTGATCATTTGCATGGAGAACGCGACAGGAGAGGATGTGGCACTGAAGATTGAACCTGAGGACAACTTCCAGACATTTCTTGACAAAGCTAAATCACTTCTAGGTTTCGAAGTAGACGTGAATTCTATAACCAAGAACCAACCAGTTTCTCTAAACGAAAACGTATATCAATTCCTGATGAACGCAGAACAGAGCATACAGCCAGAAGGCTTGTCCCAAACATTGGACCCAATGTTGAGTATCAACGAAGGCGCCGACGCCAATGACTTGGTGTACATATTGGACGATGGAACTCAAATCAGGGCATCTCAAATACACTTTGACAATGATGACCCATTGATTGATTTAACTGCAGAAAAGATACCTTTCGTTAAGTATGCTGACGTAACCGATGATATTGACATCGAAAATTTCACTATAGAGGAAACTAAAAAGATTAATATTGTTGAAAGTCCTGTATCACGATGGTCAAGCAAAAATTCCAGTCCAAAGTGCAGCTTCGTAAATTCTTTACCGTTCAAACTTGTATGTAATAACACTTCTGGATTCGAAGCGCAATTCACTAAATATTTGGAAGCAAATACAGCAAAAACTTATGCCACTTTGAACCCTGTGACCATTAGAAATAAGTCTCCTAAAAGCTTGATCAAAGATAACTTTAAAAACTATGACAGTTATCAAAGAAGTGATAGCCTTTCGTATACTAGGGAAGACATTTTGAATATGTTTAAAGATTCTCCTATGACATCACTGCCGTATGATCAAGGATACAGCGAAAGGAGGCATGTTAGGAAAACAGATCCTTCTAGACTGGTGCATAAAAGTTGGAATAAACCAATGACTTACGTAGACATAGATGGCGTTCTAATAGGAGAAAGCGAGAGTCAGATATGTTTTATATGCGGTAAACACGTGGATAATAACGTCGATAAGCTATATCTCTTCGACAATGAAGACCAGAGGGTCCACAGATGCTcacctcaaaagaaaatgtCGACCCAACTGAAAATCATATGCGAATGTTGTTTGAACGAGAATTTCAGACCATGTAGAATGAAAAGTGCCAACCAATTTTTGAATCCAGACGAATTTCTGGTTATTAGAAACAATCAGCAGTATATATTTCAGAAGATTAAGAATTTTAGTTTCACGCGTTTTGGAAAGAAGGATGTTAAAGAGACAAAACAAGACAAAGAAGAATTTGTCAAAGTCGAAATCGGTTCTGATGGAGAGATCATCACTAAGCCTATCGACAACGATCTTCGGGATGATGATGTGATCATAGTGAAGGATGATAAGAAAGAAAGTTGTTCTAGTGATGTGGAAATAATTGAGCCGGAACCtgaaatagataattttatAGATAACTTAGAGGAGGCTGATGAAGATGTGAAAGAATTCTTGGGAAAGTATAGTTGTGATACGAATGAAGTGGCTGAACTTAAGTGCAGGTTCTGCGAAAAAATATTCACGGATGTCAGTGAAGTGATGGAGCACTGTGAAGCTCATAAACACGATTTAGAAGACGGTGAAGTCTTCCCATGTCCACTGTGTAACTATGGTTATCCGCATTTAAAATGGCTAAAGGGTCATCTGAAAGCAGCTCACGATAGGAACACAAGTACCGTTGGAGGGAATATGAAGGAAGAACCTAAAGACGAAAGTGAGGCCTCAGACGAAATAAAGACAGAAGCGAACATTGCTATGAATCAGCAAGAGCCACCCATCATAAAAATGGAAGTCAAACAAGAGGTAGTGGACAGCAGTGAGGATGAGATCTGGATAGTGCAGACTGCAGATATGGAGAACAGCCAGGACTTGGAGAAACTATTGGTCAATAAGGGTACTGATGAAGTGCAAACATCTAAATCAGAGAAGAGTATCAAATGTTTTAATTGCAGTCAAATATTCCCTACAGCCGAGAGCTTATCATCACATCGATGTAAACGCAGAGGTAGGAAGCGGAAAGTTAAGGATGAAAATCTTATATGTATACCCACTGAAGAAGACTTTTTGAAGCGTTCTCGCAAGCGTCGCAACAAGCAAGTGACGTGGAACCCACAGATCGTCACCTGCCACAACTGTAACGAGTCATTCACGTCCAAAGTACGACTGAAATTTCACATGCAGTTCCATGAAAGCACAAACACGATGTTATCAGACGGAAGGTACTTGTGCACGGAATGCACTGGAACCAACTTCTCCACGGAGACGGAACTCTTCGACCACGTGCACTTCCAGCATGACAAGCAGAAGAGGTGGCAGTGTCCTGTGGAGGGGTGCGGGAAGACGTTCTTCTTGAGACCAGAGGAAGACAGCGATGAGTCAGCTGTCTGCTCTCTTGAGGAGCATGAGAAGATGATTCCTCGGCTCATGCTGTGTATCACCATTCCTCAGATCAAGCCGTTCCAGTGTCATATCTGCCTGAAGCAGTTAACCCGTCGCTCGCGATTACGAATGCATGTTCGCGCTCATGAAGAAGAACTGGCCCCTCGTCTTGTGCGCGTGTGCGCCGTGTGCAAGCGTGCCTTCCGGGATAGTGAACACGCGCAGGAGCATACAACGAAATCAACAGAATGTATAGAGGCGTACGCTAATGAACTGAAGGAGGAAACTGAGGAGATGACGGTACAGCTGTCGCCCACCAGCGGGCTCGTGAGACATACCGTGCAGATTATTGAATCACCAAAACTATCAAAACCTATCAAAAGGCAGGTCACCAACGACGTAGGAGAACCACTACTGTCTCAGCTAGCGGACGAAGCCAGGGCGCTGATACGAGTCGTAGAGATCGAGAAGGCGTTTAGGTGCGAGTACTGCGAAGATGTGTTCTACTTGGAGTCTGGTTTGAACAACCATCGCGTGATACACAAGGGGGTGAAGAACCCCTTCACTTGCCACATATGCAAAGTCAGCTTCGCTACGTATTCCAGATGTACCACCCACAAGACGACCCACGGCTTTTACAAACGTTCCCTGGCTGACGCCAAGAAGCAAGCCGATGGGTCTGCCCAAAAGGACACAGGCCCGACATCCGCCACCGGTATACTTGGGTACGGTGACTTTCCTGTCGTCAAACACTTCTTATGCGAGCTACTTATTCGCAGTTGGAGTTTGGCGTATCATCGCAAGAAAGTGCACGGTAAAACAGGGCCTGATGATCCTGGGACAAGTAATAAACCTGCCAGGGAAGATTACAGGATACCGTGTCGAGATTGCGAAGAAGTTCTCCCGAACAAGACAGCGTTGTATAAGCACAGGAAGAAAGAACATAGCGACAGTAATATGTCGGCCACGAGGACGAATAACGCTCAGGGTACATTCAGCGGCGAGGGGCGGGTATCGAACGCGTGCGCGCACTGCCCGGCCACGTTCACCCACGCGCCGGACCTACACAAACATGTCAAAGAAGTACACAAGGTGGAAGCGGACATGTCGTGCGGTTCTTGCAGCAAGTCGTTCGGCGCGGCCGGCGCACATTCCGCGTGCGCCCGCCGCCCGCACGCCTGCCCCGTCTGCGGACACGCCTTCCGCACGCTGTCCATGCGGAACGAGCACCTGCGCGTGCACACCGGCGAGCGGCCCTTCCCCTGCGACGTGTGCGGGGTCGCCTTCCGCAGGTACGCGCTGTAG
Protein Sequence: MSEPQPPVIICMENATGEDVALKIEPEDNFQTFLDKAKSLLGFEVDVNSITKNQPVSLNENVYQFLMNAEQSIQPEGLSQTLDPMLSINEGADANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADVTDDIDIENFTIEETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTAKTYATLNPVTIRNKSPKSLIKDNFKNYDSYQRSDSLSYTREDILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWNKPMTYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICECCLNENFRPCRMKSANQFLNPDEFLVIRNNQQYIFQKIKNFSFTRFGKKDVKETKQDKEEFVKVEIGSDGEIITKPIDNDLRDDDVIIVKDDKKESCSSDVEIIEPEPEIDNFIDNLEEADEDVKEFLGKYSCDTNEVAELKCRFCEKIFTDVSEVMEHCEAHKHDLEDGEVFPCPLCNYGYPHLKWLKGHLKAAHDRNTSTVGGNMKEEPKDESEASDEIKTEANIAMNQQEPPIIKMEVKQEVVDSSEDEIWIVQTADMENSQDLEKLLVNKGTDEVQTSKSEKSIKCFNCSQIFPTAESLSSHRCKRRGRKRKVKDENLICIPTEEDFLKRSRKRRNKQVTWNPQIVTCHNCNESFTSKVRLKFHMQFHESTNTMLSDGRYLCTECTGTNFSTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRPEEDSDESAVCSLEEHEKMIPRLMLCITIPQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCKRAFRDSEHAQEHTTKSTECIEAYANELKEETEEMTVQLSPTSGLVRHTVQIIESPKLSKPIKRQVTNDVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNNHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGSAQKDTGPTSATGILGYGDFPVVKHFLCELLIRSWSLAYHRKKVHGKTGPDDPGTSNKPAREDYRIPCRDCEEVLPNKTALYKHRKKEHSDSNMSATRTNNAQGTFSGEGRVSNACAHCPATFTHAPDLHKHVKEVHKVEADMSCGSCSKSFGAAGAHSACARRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRYAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502366;
90% Identity: -
80% Identity: -