Egri029099.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759246.1:8264594-8290685[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.043 5.6 9.0 0.8 1 23 1362 1384 1362 1384 0.98 2 10 0.00013 0.017 17.0 0.2 1 23 1445 1468 1445 1468 0.97 3 10 0.066 8.6 8.5 0.2 2 23 1477 1499 1477 1499 0.94 4 10 0.17 21 7.2 0.1 3 20 1511 1528 1510 1530 0.94 5 10 0.00017 0.023 16.6 1.6 3 23 1540 1560 1540 1561 0.96 6 10 1.2 1.5e+02 4.5 0.1 3 23 1577 1598 1576 1598 0.90 7 10 0.0001 0.013 17.3 3.3 1 23 1615 1637 1615 1637 0.98 8 10 0.39 50 6.0 0.0 1 23 1643 1665 1643 1665 0.95 9 10 9.9e-05 0.013 17.3 2.0 1 23 1671 1693 1671 1693 0.98 10 10 0.00055 0.071 15.0 5.9 1 23 1699 1722 1699 1722 0.96
Sequence Information
- Coding Sequence
- ATGATTACGTGTCCCCAAATTAATCGTAGTCCAGGAAGAAAGTCACAAGGCAGCAAATGTTCTGTGATCTCCAGAACAAACGAGCGACCCGCATCCGAGGGAAATGGCTTTTTCAAGTATGATATTTTAAAGAGATTGAAAGAAGCTTATAATGTCTGTACTTGTAAAGTATGCGAATGTATTCCAACAAAACTGACTAAAGACGATGTATGTAACTGTAAGCCTTGTGAATGCGCAGAATGTACTAATTCTACAGTACTGCCttcaaatataaattgtaatttttgtcGAGTTGATAATAACCAGACCAAGCTTCAGTCACAGAAAGAACACAAGAAATGTTTTTGTGAATCTTGTGAATGTGATCAATGTGTTAAGAATAATTTAGAGGTACCTTGTGATCAATGCAAACAGTTGACAGCCTGGCAACATGAAGAGGATTTATCTAACAGATATGCGTGTACCTGTTTACCATGCGATTGCACCGAGTGTAAGCACAATAACGGTGCTGGTAGAGTATTTTCAGAAATACAATTGTACAATTTTAATCACCCAACAACTCCAATAAACGAAATTTATCACCATGGAAATAAATCAAAGAGAAATAATCAACATGACCTTGTAACCATGTATGCTAGTATACCTCAATTGAACACTAATGTTGGTTTTAAAAACTCATATTCTAAATCTTGTATTTGTAAGGAATGTGAATGTCTAAAATGTGTTGGCAAAGAAGACACTATAAACTCTATAAAATCATCAAGATTCTTTCCATATGACGAGCATAGTGAAAATGAGAATTCAATCATAGAAAAGAGTGCTATTTTTAGGAAACCAAACTATAATCACATTTATACCCCTAAACCCAGTTACAATAAAAGAGAACGAACACATCAATGCAATTCCAATCATGCTCCATGTTGTGCATGTGATAAGTGTATtcgtttacaaaaacaaatgccATTATATTACTGCAAATGCTCCGCTTGTAAATGTGAACGTTGTTTTGGTCATgcattaatttcaaataattcTAATATTGCGGGCACTTGTCTATTTAAAAAAGGTGACGTTTTGACTGCTTCAGCTCATCAAACTAAAGTTCAAAAGCAGATGTTCGAAAACAGTACAGCTTCTGAAATGCGTCACAGCACatccaaaaataaaaatccacAAGGAGTTACAAACCAAGTATCAATTATTCGTCAAGTCAAGAAGGATACTGGTACAGTTTGTACAAAATCTCTTGATAGGTGGAATATATTGAAATGTGATGCATATGTGAATAGCCAAACATGGAATATCAGTAAACCTgtactaaaaaataatttcactgATATAAGACCTGGAAGTTATACGAGTATTTATTCAATCAACAAATCACCATCTATAGAAAATGAGGGATCACAAtctggtataaaatataaaaatagttcaTATCACAGCGATCCTGATAACTTAGTACAGTTTTCaaaaccaataataaaaaatgtagagTGTGATTCAAAGATCGACTTAAAGCTTAATACACGCGAAAGTATACCAGTCCTGACAAGAGTACTACAGGCAGAAGCCCCATCAGCACATGTTGAGGATTGTGAGACGCCTTCAAAATTTGAACCAACCTATTCAAATTCTTGTATACAAGTATCCACGGAGTTTGTTGAGAgcggaaaaaataaaattggtgaTTGTAGTTTGAAAAACCAGTATAacattcatttaaataataataatgaaaagaaaattgaCATTCAAGAAGATGATAGTTATCCGTCAGTTAAACTAACTCATGCACTGCCAAATACAGTTGAAACTATATGTCTTTCTGACCAAGCATACTCGTTACAAGAGAAGGTCAAAACTAATGTTCCTGAAGAAGTACTGGAAGATAAAAGTAGTAAATCATCAAATAATAACGGTGATAACTACAACTGCTTCCATATGATAGAAAATTATACTAAATATAGTTCAAATGGCTATGTTTATACTCATAAAAAATCACCGACAGAAAACTTAACTGATTGCACGGtaaataatttgttaaatataGACGATGTTTACCAAAGAGTTCACAAAACGTTAGCAGATGCAAAAAAATTTTCCTTGCACCTAATAAGCGTCTTAAGCATGTATGAGAAGGCCAATAAAGAGTTTGAAAAAGTCTCGGATAAGCTTAAAATTTCGTATGAGGCTGTTTTTGGTGACAAAATAGCTACAAAACATGAAAAATGTGGTATAAAACTAGAAAACGTTAGTGAAATTTTACATAGTAGTACTAATTTGTATTTGAACGGAACTACAACATCGGACGACTACAAGCAGActgtatttgaaaatataattataaaacgttCGGATGACTGCAGGAGAATATCGCAAAACCAGGAACTTGCTCATTTAAGCAACGCTATTTTAAATCAAAGCTCTACAAATAAGGGATATGGAATATTGGAGAAAGTAAGTGAAAGTAATAAAGGACATAATGTGTTCAAAGCTCATGAAAATTTCGGAAGTATTTGCTACAATAACGTGCTTATCAAACAAAGCAAAGAGATTGAGAAATGTAATTATGTTACCAATCCCGGTTATGAGAGTTCATTTCCTACACATGAAGATGAAACCGTGGCAGAAATAAGAACACAACAAACTATAACACAAGTTACGAAGTATTCACAACCAGTAGAAAATACTGGGCTGAGATCATCTAAGACCACTTCTGTGGATAACCCAGAAAAAGATACAGCGAACAAGGAAATAGAAACGAAAATGCTAGTTGTATCCATGAATAGTTTTGGTTGTACTGCTAAGCCGATAAGTATGGATAAGGGAGAAGGAGTAAATGAATTTCCTTCGTTAGAAGTTGGAGTGAGAGATACAATGAAGGTTCAAAATAAATCAGCGTACACGATTAAAAGtgaaatatgttatcaagaAAATAAAGCTCTGaATGTTTCGGAAGTTGTCGATGTTAAAGTAGAAAAAGTACCTAGTAAACATATTGTTGCTGCAGATGTCAATAAAGAAATTAGTTGTGATGACCGAAGTTTTATGaACGAATTCAAAAAGCAAATCCGAGAAGAGTTGCAGCTGGCTTGTACCCACCCTTTATTGAACAAAGAAAGTAAAGTTGATTCCTATAGCAGCAATGGTGAATGTGATGACCAGAAAGCTAGGTTCCTGGTGGTACACAAAGTATCGGAACACACTGTACTAGTCAGGTGGAGTGAGCCACGGGAACTCATTGGTGTCAAAGGATATGAGATTTGTGACCGAAATCAACATGTATGTTTTGCATGTGCAAGCTTACTGCAGAAATATCAGAGATTTAAGTCAAAGTGTCTTAGAGCTCACAATATATTATCCAAATTCACAGTTAATTCAACAGAGATAACAGAAGAGGTAATTCAAAGCATAGATAGGAAAAACAATGAACTGGAATCCTGTTACGGAGTCTCTAAAAttcatgtaaataatattatcccTTCAGACATTTCAAAAAATGAATACTCACACATCAATAAAGCTTTATCCAATCAAAACAAAGAGACTGATTTATTAGAATTGCAAATAAAAACTGAATCAAATGAAAAGTCTAAGGAGGTTGGATTCAGTGAGACTGCAAAAGATCCAGAAACATCAGCACAAGTTAGAATTATAAAAGAACCTAAAACTAAAaggcaaaaattaaaatatgagcAAATAGATATTACTAACATTGGTGGAAAATGTGATGATCTAAATGACTCTCTAGATGAATTAAATGATAGTGATATGATTGGGTATCCTGAAGAGATTACAGAAACATCTCTTCAGAAATGTAAAAATGAAACCATGACAGAAATTGAGAGTAAAAAAAGGAAAGTTGCAGACATGAGCAGTGACGATAATCTTAGTGATAATGAACCTTTATCTAAAAGCGTTACTAAAGTTGGAAGCAGTTCACGAGAATCTCTTAAGAAGGTGAACAATTTTAATGAAGACTTATTTGAAGACTatgtaacaattatttttctaacGCTTGAAGATGCTAGGAAAGAGTTACTTTCACGAAAAGAATCCAGTAATTATAAAAGGTCGCCATTTAAATGTGAGCTTTGTTACAAGGGATATGAGGCACAAGCAGCTTTTGAAAATCATAAGAAAAAGCATAGTATAGAACATGGTGACTATGAGTGTGATGTTTGCTACCTTAGATTCCTAAAGccgatttatttatgtaaacatAAGTTGTCATGTCacaaaagaaaatttacttgcaAGCTATGTCCATATATATGTTACTGCATGGACCAAGCTAGAACCCATGTGAGTCTTCACCAAGGAAAGAAGTATCCATGCAAGGATTGTGGGGAAATATTCAGTATGCCGAACAGCCTGCTGATGCATAAACGGGTAAAGCACTTCGACGAGTCAGTGGCGGAGAACGTGTGCGAGTTCTGCGGGAACACATTCGCTTCAGCTCGAGGACTCTTCTTACACAATATGAAGCTGCATCGCACGGAAAAGAATAGCAAGGAAGGACCTAATTGCGAAGAGTGTGGTGTTCACTTTACTTCGGATGTGGCCTGGAAGCGGCATCTAGTGCTGTCCACCAAACATGTAGTTAGTAACGGTTGCAAGTATTGCGGTGAACGATTTGCGAACGACGAGGAGTTAAAACGTCACACGCGCGCACATCACCCACGTGTCAAACAGAAGACATGTGAGAAGAAGCTACCCGCAGCTTGTCCCGTTTGCAATAAATGGCTATCAAATCGCGTGGAATACAACAAACACGTAACCGGCGAACATCCTCAGTCGGACGAGGCGAAGAGACTGAACAATCATGAACTCACGCCATTCGTGTGTGAAGTTTGCGGGCAGGCGTTTAAGCAGCAGTGCTTCCTGACGTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACGCGTGCGGCGCGTGCGCCAAGTCGTTCGCCATGGCGGGCGCGCTGGCGCTGCACCGCGCCGTGCACGagcgcgcgcgcgcgcacaAGTGCCCGCTGTGCGCGCGACTCTTCTCCTTCAAGAGCGCGCTCAACAAGCACATGAAGATCCACCTCGGCATACGGCCACACAAGTGTACAATCTGCGACAAAGGCTTCATCCACAAATGTGATTTGAAGCTACACATCAAGTATGTCCACGACAAAGTGCCTTGGCCTAAGAAGAAAAGCAAACGCAAGGCCCCAGACGATAATGCGTCGTATGCAGAATACAATTAA
- Protein Sequence
- MITCPQINRSPGRKSQGSKCSVISRTNERPASEGNGFFKYDILKRLKEAYNVCTCKVCECIPTKLTKDDVCNCKPCECAECTNSTVLPSNINCNFCRVDNNQTKLQSQKEHKKCFCESCECDQCVKNNLEVPCDQCKQLTAWQHEEDLSNRYACTCLPCDCTECKHNNGAGRVFSEIQLYNFNHPTTPINEIYHHGNKSKRNNQHDLVTMYASIPQLNTNVGFKNSYSKSCICKECECLKCVGKEDTINSIKSSRFFPYDEHSENENSIIEKSAIFRKPNYNHIYTPKPSYNKRERTHQCNSNHAPCCACDKCIRLQKQMPLYYCKCSACKCERCFGHALISNNSNIAGTCLFKKGDVLTASAHQTKVQKQMFENSTASEMRHSTSKNKNPQGVTNQVSIIRQVKKDTGTVCTKSLDRWNILKCDAYVNSQTWNISKPVLKNNFTDIRPGSYTSIYSINKSPSIENEGSQSGIKYKNSSYHSDPDNLVQFSKPIIKNVECDSKIDLKLNTRESIPVLTRVLQAEAPSAHVEDCETPSKFEPTYSNSCIQVSTEFVESGKNKIGDCSLKNQYNIHLNNNNEKKIDIQEDDSYPSVKLTHALPNTVETICLSDQAYSLQEKVKTNVPEEVLEDKSSKSSNNNGDNYNCFHMIENYTKYSSNGYVYTHKKSPTENLTDCTVNNLLNIDDVYQRVHKTLADAKKFSLHLISVLSMYEKANKEFEKVSDKLKISYEAVFGDKIATKHEKCGIKLENVSEILHSSTNLYLNGTTTSDDYKQTVFENIIIKRSDDCRRISQNQELAHLSNAILNQSSTNKGYGILEKVSESNKGHNVFKAHENFGSICYNNVLIKQSKEIEKCNYVTNPGYESSFPTHEDETVAEIRTQQTITQVTKYSQPVENTGLRSSKTTSVDNPEKDTANKEIETKMLVVSMNSFGCTAKPISMDKGEGVNEFPSLEVGVRDTMKVQNKSAYTIKSEICYQENKALNVSEVVDVKVEKVPSKHIVAADVNKEISCDDRSFMNEFKKQIREELQLACTHPLLNKESKVDSYSSNGECDDQKARFLVVHKVSEHTVLVRWSEPRELIGVKGYEICDRNQHVCFACASLLQKYQRFKSKCLRAHNILSKFTVNSTEITEEVIQSIDRKNNELESCYGVSKIHVNNIIPSDISKNEYSHINKALSNQNKETDLLELQIKTESNEKSKEVGFSETAKDPETSAQVRIIKEPKTKRQKLKYEQIDITNIGGKCDDLNDSLDELNDSDMIGYPEEITETSLQKCKNETMTEIESKKRKVADMSSDDNLSDNEPLSKSVTKVGSSSRESLKKVNNFNEDLFEDYVTIIFLTLEDARKELLSRKESSNYKRSPFKCELCYKGYEAQAAFENHKKKHSIEHGDYECDVCYLRFLKPIYLCKHKLSCHKRKFTCKLCPYICYCMDQARTHVSLHQGKKYPCKDCGEIFSMPNSLLMHKRVKHFDESVAENVCEFCGNTFASARGLFLHNMKLHRTEKNSKEGPNCEECGVHFTSDVAWKRHLVLSTKHVVSNGCKYCGERFANDEELKRHTRAHHPRVKQKTCEKKLPAACPVCNKWLSNRVEYNKHVTGEHPQSDEAKRLNNHELTPFVCEVCGQAFKQQCFLTYHQRKHTGERPYACGACAKSFAMAGALALHRAVHERARAHKCPLCARLFSFKSALNKHMKIHLGIRPHKCTICDKGFIHKCDLKLHIKYVHDKVPWPKKKSKRKAPDDNASYAEYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -