Basic Information

Insect: Eilema griseolum
Gene Symbol: RREB1
Assembly: GCA_963662185.1
Location: OY759254.1:10330554-10343026[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.097 12 7.9 0.4 1 23 110 133 110 133 0.94

2 11 0.024 3.1 9.8 0.1 1 23 324 346 324 346 0.97

3 11 0.0013 0.17 13.8 0.4 1 23 355 377 355 377 0.99

4 11 0.00081 0.1 14.5 2.0 1 23 383 406 383 406 0.97

5 11 0.0033 0.42 12.6 1.6 1 23 751 774 751 774 0.96

6 11 0.00027 0.035 16.0 1.3 2 23 969 990 968 990 0.97

7 11 0.12 16 7.6 6.5 1 23 996 1019 996 1019 0.97

8 11 0.07 9 8.4 1.2 1 23 1052 1076 1052 1076 0.92

9 11 0.0062 0.8 11.7 0.4 1 23 1100 1123 1100 1123 0.97

10 11 0.002 0.26 13.2 0.2 2 23 1163 1184 1162 1184 0.96

11 11 0.031 4 9.5 5.3 1 23 1190 1212 1190 1212 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.097	12	7.9	0.4	1	23	110	133	110	133	0.94
2	11	0.024	3.1	9.8	0.1	1	23	324	346	324	346	0.97
3	11	0.0013	0.17	13.8	0.4	1	23	355	377	355	377	0.99
4	11	0.00081	0.1	14.5	2.0	1	23	383	406	383	406	0.97
5	11	0.0033	0.42	12.6	1.6	1	23	751	774	751	774	0.96
6	11	0.00027	0.035	16.0	1.3	2	23	969	990	968	990	0.97
7	11	0.12	16	7.6	6.5	1	23	996	1019	996	1019	0.97
8	11	0.07	9	8.4	1.2	1	23	1052	1076	1052	1076	0.92
9	11	0.0062	0.8	11.7	0.4	1	23	1100	1123	1100	1123	0.97
10	11	0.002	0.26	13.2	0.2	2	23	1163	1184	1162	1184	0.96
11	11	0.031	4	9.5	5.3	1	23	1190	1212	1190	1212	0.97

Sequence Information

Coding Sequence: ATGGCGATAGGTCGATTTAAATTCCGAATAAGCGGGAAGGAGGAAGTCACGGTGCGCCTGCGGTTCTGTGACACCTTTTCTCCGTACATGAAGTTGATTGAACTTGAAATCAAAACAGAGGAGGTCATCAGTCAGGCTAAAATCGAGGCCGAAGTAGAAATGGACGGGGTAAAAATTGAAAGGCAGGAGTTCAGAGCCACTAGGACTATGAGCATTGACAGCGACAACAGGTCCGATAGGAGTGAGGAAGAAGACACCAGAAGAGGACGCAAGAGGGTGGCCTCGTCGTCTCCATCGCCAATGCCAATGGACAAAAGGATTGCCCGATTCGAGTGTCCCAAATGCAGACAGAGGTTTGACTCAGTCAACGCCTATGACATTCACCGCTATACCGCACATAGTGACGAAACCAAGGCTGGTTTTGACGACCTAACTTTTGTGGATTTTTCTAGCAAAAAGTTTGCAGAAATTGCTCGCGGTGTTTGTGATAGAAAACCTCACGTATCAATTACCGATCAGCGTTACAGATGCGATATCTGCGTAAGGGATTTCCCTTGCGGACAAGCACTGGACATTCATAGAAAATCCTGTGCACAGAACACGCGAATCCCGAGTCCAGAAAGAGATCATAGGGAGGACTTCTTTGCAAAGCTAGATCTGAGAAACAGATCGTTCGGAATTTCTGGTACCTTAACACCACCGATGGAAAGATTCCCTCCCAAATACGACGATGGTCATCTAAACACAAATGGTATTAGACACATCGATGCAGCCCGAGACTTGGCCGATATCCAGTCAATATTGAATGTCACGTCGGCCGGTGGCCTTTTAGAGAGGCTTACTGGCTCAAGAGTGGCTTTAGAAAGCGCAGCGCTTACCCCTCCCGATACTATCATAAAGGAGCGAGACCAAGAGGAAACTCAAGATAACTTCGCAGCTGAATTCAGACGCATGAAGTTGCGTGGAGAATTCCCTTGCAGATTGTGCCCGGCCAAATTTCCAAACCTTAGAGCTTTGAAAGGACATAACAGAGTGCACTTGAGTGGAACGGGGCCCGGACCGTATCAATGCAACATGTGTCCACATGCTTCTTTAGATAAGGCTGCTTTAGTGCGTCATATGCGCACGCATAACGGAGACCGACCTTATGAATGCGCCGTGTGTAATTATGCTTTCACAACTAAAGCTAATTGTGAGCGTCACTTAAGAAACAGACACGCTAAAGTAACTAGGGAGGATGTCAAAAGATCTATTATTTACCATCCGTCTGAAGACCCAAATAATGACGAAGTCAACTCTAAACTTGCACGAGACGAGGTAAAAAGATCAATAGCTTTTCATACACCTGACGTGGATAGACGAAGTGAAAGTACTGGTCGCGATACTCCGCTTACCCACTTTACACCAACCTTCATATCAGAACGACATCCAGTCACTAATTTGACAACTAAAACTATTTCTGAACCGCCTATGATTCAAAGAGATCCAGAACAACCCACACCTCGTATTAAAGTAAAGGGTATTGGCCAGTTGACGCAAATACCTGAATTTAGGCCACCAGAGCTATCTTACGAAGTAAGCCCACAGGTCCAACCAGAGCCATATGATGAAGAAGTACCAGTAGATTTAAGCACAAGTGATAACTGCGATGCTCTTGACCTTAGCAAGAAGAAACGCGATAGCGACGATGAACCTAAACCCCCACAACGTCCATCTTTCGAACCTGACCCAGCAAGCATTGCCGCATCAGCGTTTGAAAAGACAAGATTTATATTAGCTCAACAAAGACTCTTCGAGTCATCCCTTCCAAAAATTGATCCAGCCTATTATGCCTCTCAGCTATCCCAACTTTATGCTGGTGCTGTTCCTGGAATACCTGGTCTACCCTTACCGCCGTCTTTTCCTATAGCCCCATATTTACTTCAACCATCGTTTTTTCCTCACCCAACTGACTCGCAAGAACTTGCTGAAATAAAACAGCGTATTCAAAAGGAGATAATACGAGGACTAAGCATGTCTGGTGGCCGACTTGTTCCTAACGAACAGGAAAATCAACCTAAATTAGAACCTGAGGAAGAAGAACAAAAACCACCGCCAGTTCTTTCCCCCGTCCCATCACCGCATTCAGAGTCGCCACGCCCCCAAATGAATAACTCAATTGTTTCTCAAACCGATTCTGTCAAAATGGTCATAAAAAACGGTATTCTCATGCCAAAACAGAaacaaaggcgatatcgaaccgAAAGACCCTTCTCATGCTCCCAATGTTCGGCGCGATTCACTCTTAGATCAAATATGGAACGACATGTAAAGCAACAACATCCTCAACACTGGAGCGTGCGTAGGCCGTCGCCAAGAGCTCCACCACCATACCCTACTCCTGACTCAATAACTGACCGCATGAAGTTTGCGTTGTTGGCTCGCCATCTAGAAAGGCCTTTGCAGCAGTCAGAGCGATCGCCAGTAAGACGGGATAGTGACGAAGTAGCTGACAATGAGGAGGATGAGGAAGACACCTTGGTAATAGATGAAGAACCGGACCAAGATATGAAGGCGGAAGATCATACTGCCGCTCGGCGCGCTGCAGCCGAAATACTAATGGCTACATGCCAGCAAGAAATGAATAAAGACTTTGATCTCAAAATTGCGGGCAATCTGATTAATAAACCGGTACACGTTAACAATGAGAAAACGGATTCTGGAATGAACCTCACGTTGGGAAACCAAGACGTTTCACCAGTACCGGTTGTACCAACTCGCagcgatgaagaagaagatgaagAAGGATTGGTTGCCTCCACTAGTGAAGGCAATAACTCCGGCAGTGATGAAAATAAATCAGAAACGGATACAGCACAACCACCAAAGAAAAAGTCAGCATACAGCCTTGCACCAAACCGCGTGTCATGCCCATATTGCCACCGAAAATTCCCGTGGTCCTCATCTCTAAGACGCCACGTTCTAACTCACACTGGACAAAAACCCTTTAAGTGCCCACACTGCACATTACTTTTCACCACCAAGTCAAACTGTGACCGCCATCTGTTAAGAAAGCATGGGGGATCAGCTCGAGCAATCTTAGCAGACCCTATTCCTGAAGCCGTATCACCACCTCAGCCAATTAACGACAATCGAGCTGTCCCTGATAGACCATACAAATGCGCATCTTGTCCCACCAGTACGTTTTCTTCTCTCGAAACATTGAAGAAGCATATGTCTTCGAGACACGGAAGTGATTCACAACCAAGTTCACCTGCTCCCGAAATTATTGAAGAATCCGCGGAAGGTGGTCTAGTCTTTAAGTGCCATCTGTGTGAAGCATCATTTAGTGACAGAAATGGGGCTCTAAATCATCTGGCGACTGGACATGCAGCAGAATATGAGTTACTTCTGAGCAAAGGAGCTTTAGATGCCAATAGTGACAAGAGTGAGAGCGCAGACGATGATGAGAGAGGGAAGTTTCCAGACCACGCTAATAGAAAGGTGGTATGCGCATTCTGCGTACGTCGCTTCTGGTCAGCCGAGGACCTTCGCCGTCACATGCGGACGCACTCCGGAGAGAGACCGTTCGCTTGTGACCTATGCAGACGTCGCTTCACCCTGAAGCACAGCATGCTCCGTCATAGGAAGAAGCATCGTGAAGAAATTACTGATGATGAGGAGGCTTCACCACCGACTACTCCAATGGAGGAAAATATTACTAATGGgTATCGCTACCAAGACGACGATGGGTCAGGCAACGAGATCCCAAGCAACGTAAACAACAACAATTCCCCTCCATCAGCCCCGTACGACAAAAAGCTGCAATTGGATATGACGTCACGCAAATACTCCTCAGAGGCCGACAATGACCACGAGAACAGCGATCTCATTGGCAAACTTCTTGGTATCCCTGACAAAACTATCAACAAGCTACTCTCTTCTGCAGACGAGGCAGCTAAAATCCTGGGAGTGAACAAATGA
Protein Sequence: MAIGRFKFRISGKEEVTVRLRFCDTFSPYMKLIELEIKTEEVISQAKIEAEVEMDGVKIERQEFRATRTMSIDSDNRSDRSEEEDTRRGRKRVASSSPSPMPMDKRIARFECPKCRQRFDSVNAYDIHRYTAHSDETKAGFDDLTFVDFSSKKFAEIARGVCDRKPHVSITDQRYRCDICVRDFPCGQALDIHRKSCAQNTRIPSPERDHREDFFAKLDLRNRSFGISGTLTPPMERFPPKYDDGHLNTNGIRHIDAARDLADIQSILNVTSAGGLLERLTGSRVALESAALTPPDTIIKERDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSIAFHTPDVDRRSESTGRDTPLTHFTPTFISERHPVTNLTTKTISEPPMIQRDPEQPTPRIKVKGIGQLTQIPEFRPPELSYEVSPQVQPEPYDEEVPVDLSTSDNCDALDLSKKKRDSDDEPKPPQRPSFEPDPASIAASAFEKTRFILAQQRLFESSLPKIDPAYYASQLSQLYAGAVPGIPGLPLPPSFPIAPYLLQPSFFPHPTDSQELAEIKQRIQKEIIRGLSMSGGRLVPNEQENQPKLEPEEEEQKPPPVLSPVPSPHSESPRPQMNNSIVSQTDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPSPRAPPPYPTPDSITDRMKFALLARHLERPLQQSERSPVRRDSDEVADNEEDEEDTLVIDEEPDQDMKAEDHTAARRAAAEILMATCQQEMNKDFDLKIAGNLINKPVHVNNEKTDSGMNLTLGNQDVSPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSETDTAQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCTLLFTTKSNCDRHLLRKHGGSARAILADPIPEAVSPPQPINDNRAVPDRPYKCASCPTSTFSSLETLKKHMSSRHGSDSQPSSPAPEIIEESAEGGLVFKCHLCEASFSDRNGALNHLATGHAAEYELLLSKGALDANSDKSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEASPPTTPMEENITNGYRYQDDDGSGNEIPSNVNNNNSPPSAPYDKKLQLDMTSRKYSSEADNDHENSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00795186;
80% Identity: -