Basic Information

Insect: Eilema griseolum
Gene Symbol: Bcl11a
Assembly: GCA_963662185.1
Location: OY759249.1:6138199-6148552[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.013 1.7 10.7 1.8 2 23 73 94 72 94 0.96

2 12 0.051 6.6 8.8 1.1 3 23 102 123 101 123 0.94

3 12 0.33 42 6.3 1.4 2 23 131 153 130 153 0.91

4 12 8.2e-06 0.0011 20.7 1.3 1 23 159 181 159 181 0.96

5 12 6e-07 7.7e-05 24.3 2.7 1 23 187 209 187 209 0.96

6 12 0.023 2.9 9.9 1.8 1 21 215 235 215 236 0.93

7 12 0.34 44 6.2 4.2 1 19 254 272 254 277 0.92

8 12 5.5e-05 0.0071 18.2 1.7 1 23 597 619 597 619 0.97

9 12 1.8e-05 0.0023 19.7 2.9 1 23 626 648 626 648 0.97

10 12 2.4 3.1e+02 3.6 0.2 1 23 656 679 656 679 0.93

11 12 0.0035 0.45 12.5 2.5 3 23 687 709 685 709 0.88

12 12 0.00019 0.024 16.5 2.3 1 21 715 735 715 736 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.013	1.7	10.7	1.8	2	23	73	94	72	94	0.96
2	12	0.051	6.6	8.8	1.1	3	23	102	123	101	123	0.94
3	12	0.33	42	6.3	1.4	2	23	131	153	130	153	0.91
4	12	8.2e-06	0.0011	20.7	1.3	1	23	159	181	159	181	0.96
5	12	6e-07	7.7e-05	24.3	2.7	1	23	187	209	187	209	0.96
6	12	0.023	2.9	9.9	1.8	1	21	215	235	215	236	0.93
7	12	0.34	44	6.2	4.2	1	19	254	272	254	277	0.92
8	12	5.5e-05	0.0071	18.2	1.7	1	23	597	619	597	619	0.97
9	12	1.8e-05	0.0023	19.7	2.9	1	23	626	648	626	648	0.97
10	12	2.4	3.1e+02	3.6	0.2	1	23	656	679	656	679	0.93
11	12	0.0035	0.45	12.5	2.5	3	23	687	709	685	709	0.88
12	12	0.00019	0.024	16.5	2.3	1	21	715	735	715	736	0.96

Sequence Information

Coding Sequence: ATGGATTCAAATTTGCCATTTTTTAGTTTACCATTTGTAGATGCTGAAGCAACAGATTTAGAATTCCACAAGCTCAAGCAGGAGTCAGTATATGACGTCTTAAACCCTGCTTTACCATCCCATAGTGCACTGCTGGGCACAGATGATGTCCTGGCCCAGTTTCTGTCAGGGGATGAACCACTAGAAGAGCCAGATTTGAACGGGCCCACTACACTTCATTGCGAAATATGTAGAAAGCAGTTTGATAATGCCAAGAAGTATTATGGACATTTGAGGGTACATTCTAAAGATAATCTTTGGCTTTGTGaGAAATGTCCAAACGTAAAGTTCTCTACAAAACAGCAGTTAATGAAGCACACATTGAGCCACAAGCCACTGGAGTTGATCTGGAAGTGCCCACACTGCGCCATGGCCTTCGAGGCTCTATGGAAGCTACAGCAACATTTGTTTCATAAACATTTAGACTACAGaCCATACAAATGCGATGAATGTGAGAAAGCATTCTACAAGCCCTCAGACCTCAAGAAACACAAAGATCAGCACAGTGATGTAAAGAAGCATGCATGCAATGTGTGTGAGATGAAGTTCAAAGACAAGTCCAACCTGCGCCGGCACATGTTGACGCACAACAACGAGAAGCCTTTCTGCTGTCCCGGCTGCCGGAACAGGTTTAAACAGTTGGCATCGATGAAGCGCCATGCCCAAAAGTGTCCCCTGAACAAGACCCACTTCGAGCCGGCCGACAAGACGATCCGGAGGCACCACTGTCGCGTCTGCGGCCTCAGCTTCCAGTACAAGAGTGCTTTGTTAGAGCATTGTGTTAGACAACACAGCAACAACGCCTCAGAGACGCCCTATAAAGAAGACAAATACCAAAACAGTGATGCAAATAGAATCGTCGATAACATCGTAGACGACATTCTGTCCGCTGAAGACGATTACATGACCATGTCTACTCAGAACGAGATACTCAACGTGTACAATCAAAACGAAATAGACTACATACCCGACAACCTTATGCAAATAGAGTTACTCAAAGAAATGAACACCTTCCATATATTAGATGAAGAACTATATAACGATATTGACTTCGACAGTATACAACCAAGTCACATCTTCAACACAAATACAAACGATATGGACTACCCTCAAGACAAAAATGGAGAAATCCTTTTCGATTTTACAGATGGCAAGAGTATCGATCAGGATATAATGAATGCACTATGTCATGCAAAAACGGATTTGGCAGACGAACTACTAAATCCGGATACACTTATACCAAAACAAACTGAAATAGAAGCTCCGGTATCAGTCAACGAATGTGCTACTATATTTGAAAGTGATGTTGACTTAGAAGCTAGTACTAATCTAGCAGCAAATTTGAATCAGTTGATCGGTGAAAATCGTGTACAATACATATCTACGGAGCACGACGATACGTTTATTATAAGTTTGAATAGCGAGATTGATGCTGAAAAGTTAACAGACATGTTGAATATCGGTGTGGAGTTAGTGAATAACGAAACTAATGAAAACGTACCTTCAGAAACTGAGTTTGCAGAGGCAAAAGAAAAGATTGAGACTTTAGTTGTAAAGATTGAAGAGAAAGATGATCCAATAGTTAAATTCAAGCAAGAAGAGATCAATATACAGCAGATGATACAGATTGAGAAGGAAGATAGTCCAATGGTAGTTAGCAAGGAGTCGGTAGAGAGCGACGTAGAGGCAAAGGCGATAAGTCGCGATGAGAAAGATATAAAGATGAAAgtgaagaaaaaaattaaattatttgtttgtagAACTTGTAATAAAGTTTTCAATAAGAAGGACAACTATAACTCTCATAGAGCGGTCCACGAGCCGGCCCTGCGCGCGCACTCGTGCGAGGTGTGCGGCGAGCGCTTCGGGTACCGCTCCACGCTCAACAAGCATCGGCGCCGGCACGCGCCCGCCGTGCTGCCGGCGCACGCCTGCCCGCTGTGCGCCAACACCTACGCCGCGCGCTGGCGCTTGAAGACGCACCTGGCCCGCGACCACGAGGGTCTGACGCCGCACGCGTGCGACCACCCCGCCTGCGGCAAGAAGTTCTACAAGAAGAGCGACCTCGTCGTGCATAAGAGGTACCACACGGGCGAGCGGCCGTACGCGTGCGCCAAGTGCCACCGCTCGTACCCGCACGTGTCGCACCTGCGCCGCCATCAGCGCGCCTCCGCCTGCGCCGACGAGTGA
Protein Sequence: MDSNLPFFSLPFVDAEATDLEFHKLKQESVYDVLNPALPSHSALLGTDDVLAQFLSGDEPLEEPDLNGPTTLHCEICRKQFDNAKKYYGHLRVHSKDNLWLCEKCPNVKFSTKQQLMKHTLSHKPLELIWKCPHCAMAFEALWKLQQHLFHKHLDYRPYKCDECEKAFYKPSDLKKHKDQHSDVKKHACNVCEMKFKDKSNLRRHMLTHNNEKPFCCPGCRNRFKQLASMKRHAQKCPLNKTHFEPADKTIRRHHCRVCGLSFQYKSALLEHCVRQHSNNASETPYKEDKYQNSDANRIVDNIVDDILSAEDDYMTMSTQNEILNVYNQNEIDYIPDNLMQIELLKEMNTFHILDEELYNDIDFDSIQPSHIFNTNTNDMDYPQDKNGEILFDFTDGKSIDQDIMNALCHAKTDLADELLNPDTLIPKQTEIEAPVSVNECATIFESDVDLEASTNLAANLNQLIGENRVQYISTEHDDTFIISLNSEIDAEKLTDMLNIGVELVNNETNENVPSETEFAEAKEKIETLVVKIEEKDDPIVKFKQEEINIQQMIQIEKEDSPMVVSKESVESDVEAKAISRDEKDIKMKVKKKIKLFVCRTCNKVFNKKDNYNSHRAVHEPALRAHSCEVCGERFGYRSTLNKHRRRHAPAVLPAHACPLCANTYAARWRLKTHLARDHEGLTPHACDHPACGKKFYKKSDLVVHKRYHTGERPYACAKCHRSYPHVSHLRRHQRASACADE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198119;
90% Identity: -
80% Identity: -