Egri041492.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema griseolum
Gene Symbol
-
Assembly
GCA_963662185.1
Location
OY759255.1:16751141-16754334[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.021 2.8 10.0 0.3 1 23 234 257 234 257 0.94
2 16 4.8e-05 0.0062 18.3 2.4 1 23 262 284 262 284 0.97
3 16 0.00073 0.094 14.6 0.6 1 23 314 337 314 337 0.95
4 16 0.0011 0.14 14.1 0.7 2 23 398 420 397 420 0.96
5 16 0.0052 0.67 11.9 1.4 1 23 426 449 426 449 0.93
6 16 0.00016 0.02 16.7 0.6 1 21 452 472 452 473 0.96
7 16 0.011 1.4 10.9 0.3 1 23 481 504 481 504 0.94
8 16 0.0076 0.98 11.4 0.3 2 23 545 566 544 566 0.96
9 16 0.00059 0.076 14.9 1.7 1 23 572 594 572 594 0.97
10 16 0.01 1.4 11.0 2.4 1 23 630 652 630 652 0.96
11 16 0.025 3.3 9.8 0.1 3 23 658 678 657 678 0.93
12 16 0.00012 0.015 17.1 1.4 2 23 693 715 692 715 0.96
13 16 0.0011 0.15 14.0 2.7 1 23 721 743 721 743 0.98
14 16 0.0022 0.28 13.1 6.0 2 23 750 771 749 771 0.96
15 16 0.00014 0.018 16.9 1.7 1 23 777 800 777 800 0.96
16 16 1.8 2.3e+02 3.9 3.3 3 23 807 828 805 828 0.95

Sequence Information

Coding Sequence
atgATGGAGGCTACAAAAAAAAGGAATCCTGAGAACTGGGAGTGGGTGAAAGAGAAACTAAAAGCAGTTTGGACTTCACAGAAGTTCTGCGGTCTTTGTTTGGAGCACACTGGCAACTTCTGCTCTGTAGATATGGAGCTACTTATAAACAAGCAGGAATTCACAAGATGTCTTCAAGATATCATTAACTATGTTTTTAATGATGATATTGAAAACCTAATGTCCAGCCAGTATTTATGTGATGCCTGCACTGAAAAAATTATAGAGTCGTACATCTttatacacaacacgaaacaaCTGTCTAGAATTATGAACAACTGTGTCAGTGACATATATTCTAAGGTCATAGATGTCAATGACCAACTCCTCGACACCACGAGCTATGAAAATGCAAATGTCATGATCGTTGTGGAGGCAGACACAGATTTATACAAAAGTATAATAGATACCAAGATGACAGAAATCGTTCCAACTGTCAACCCCATAGCTATGAAAATGGAAGAACCAAAACCAACAATATTAGAAAAAGTTGCAACTGTGAAACCAGAGTTAAAAATTCCTAAAGAAGAACCTATCAAAAAAATACCTCTCCATAAGCCTATTCAATCTCAGGACACACCTAACATTACGTTAAAGGAAGGTCATATTGTCATTAAACCATTAAATGCTGCGAGGAATCTCACTCCTCGGTACAACACCTATGAGTGTCCCAGTTGCCCCGATATATTCACAACATACAGATCTTTGAAGGAACATGAGAAAGCCAAACATAAGAAATCTGTGTTTGCTTGTAATTTATGCAATAAGACGTACAATACTCGgcaatatttaaatatacattacaAAACTCATGCAAaagctaagtgcaaatattgcCAAGTGCTATTACCGGAAGGTGAGCTAATGGAACATTTGAGATCAAATCATTCATATTTGGTGTTCCCCTGTAAGTTCTGTGACCTAGTGTATTACACCCAAGACTCTTTAATAACACATTTCAATATAAGTCATTTAATAAACAATACTAAGATGAAATCACAGTGCATTATGTGTTTAAGAAATTTCAAAGACGGTGAAATTAGAAAACATAAATGCAAGTTCACTTGCTCGGAATGCTTTGTGATGCCTTGCCTTCATTATAAGTACTTGATGTCTTACAGAGAGCAAATGTTGAATCatgctaataaaattaaatgtatggaTTGTGATTATGTGACCCGAAGGAAGGAACATCTTATCGGTCATGTGAATCGAGAACATTTGGATCATCATCCATTTACTTGTGCCGACTGCAGCCAGCAGTTCTACACAAAATTAAGTTTGAAAACACATATAGTTCAGTTCCACCAAGAATTTACTTGCGAGTACTGTGATTTTGAATTCAAAGACAATAACAGTTTAgaaaatcatagaaaagcttGCAGATCAGTTATTCGCGCGTTCAGCTGTGATCACTGCCCAGCTTCTTTCGACGTAGATGAGGAATTAACTAATCATGAGAATTTAAGACATAGTGAGAGTGTTCTTGCATGCAATCTTTGCAAGAGCAAGTTCTTAACCAATTTAGAACTAGATGAGCACCATGCAAGAGTGCATGGTGGCATCCAATGCAAGAAACGAAGGAAGCGTATTGAATGTTCGTTATGCGATCTGTTCTTCAGAAATATTAAAGAGTTGCTTCAGCATGAGAAGTTACATGCCCAAAACGAAATATATCCTTGTAAAAAATGTccgaaaaaatttaaaagtttaatgaaaCTTTATATACACGGCCAAAAACATTACacaaatagaataaaatgtaCCCGCTGCAATAAAAATGTTGCGGCTTCATTCTTCTCACAGCACAGTGTCCGCTGTCCGTACAAGAGAGAGGGAGCACTAAAACATGTCTGTGAGGTCTGCGGAAAGGCTTTCCATCTGGAATCGCTTCTACGTTTCCACCAAAAAATGCACCTTGAACGGGAGCCGTGTCCGCAGTGTGACAAAATCATCAAGCCAACCAGTTTAAAAAGACACATGGAGCAAGTTCACGGTGAAGTAGTGCCGGTCAAGCTACCAAAGCAGCCCTCAATTGAATGTCAGATATGTGGACATGTAGTTAGAAAAAAGCATGATCTAGAAGCACATATGAATAGATATCATTTGAAAATCAAACCGTATGTCTGTCACATATGTAGCAAAGACTTCTGTGGGAAAATCCGCTTGAAAGAACATATAGCAACACATACTAACGACAACAATTGTTTCTGCTCTGTCTGCGGAAAGAAATTTGCAAACCGTGTATGTTTAAAAATGCATTTCCGGATGCATACTGGAGAGCTGCCATATGCCTGTGATCTCTGCGGGCAGAAATTTAGGTCTTCAAGCATGATGAAGACTCATCGGTTAAAGAAGCATTTGGAAAAGACCGTATGCTGTCCATTGTGCGATAGTATGTTCTATATGGTACGAGATATGAGACATCACTTCCGGAAGATTCATTGGAAGTTTAAGGACAAGCCATTCAATGTGAGGGATGTCGAGGAGCTAGGAGAGGAATTTTATCATCTGTTTGAAGATGGGAGGATACCAAAACTTGATTCTTGA
Protein Sequence
MMEATKKRNPENWEWVKEKLKAVWTSQKFCGLCLEHTGNFCSVDMELLINKQEFTRCLQDIINYVFNDDIENLMSSQYLCDACTEKIIESYIFIHNTKQLSRIMNNCVSDIYSKVIDVNDQLLDTTSYENANVMIVVEADTDLYKSIIDTKMTEIVPTVNPIAMKMEEPKPTILEKVATVKPELKIPKEEPIKKIPLHKPIQSQDTPNITLKEGHIVIKPLNAARNLTPRYNTYECPSCPDIFTTYRSLKEHEKAKHKKSVFACNLCNKTYNTRQYLNIHYKTHAKAKCKYCQVLLPEGELMEHLRSNHSYLVFPCKFCDLVYYTQDSLITHFNISHLINNTKMKSQCIMCLRNFKDGEIRKHKCKFTCSECFVMPCLHYKYLMSYREQMLNHANKIKCMDCDYVTRRKEHLIGHVNREHLDHHPFTCADCSQQFYTKLSLKTHIVQFHQEFTCEYCDFEFKDNNSLENHRKACRSVIRAFSCDHCPASFDVDEELTNHENLRHSESVLACNLCKSKFLTNLELDEHHARVHGGIQCKKRRKRIECSLCDLFFRNIKELLQHEKLHAQNEIYPCKKCPKKFKSLMKLYIHGQKHYTNRIKCTRCNKNVAASFFSQHSVRCPYKREGALKHVCEVCGKAFHLESLLRFHQKMHLEREPCPQCDKIIKPTSLKRHMEQVHGEVVPVKLPKQPSIECQICGHVVRKKHDLEAHMNRYHLKIKPYVCHICSKDFCGKIRLKEHIATHTNDNNCFCSVCGKKFANRVCLKMHFRMHTGELPYACDLCGQKFRSSSMMKTHRLKKHLEKTVCCPLCDSMFYMVRDMRHHFRKIHWKFKDKPFNVRDVEELGEEFYHLFEDGRIPKLDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00909108;
90% Identity
iTF_00636788;
80% Identity
-