Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759247.1:10832860-10850967[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.054 7 8.7 0.3 6 20 11 25 6 27 0.92

2 14 5.2 6.7e+02 2.5 0.1 2 20 33 51 32 53 0.90

3 14 2.1 2.7e+02 3.7 0.2 1 12 209 220 209 223 0.92

4 14 4.1 5.3e+02 2.8 0.1 1 19 345 363 345 363 0.96

5 14 3.8e-05 0.0049 18.7 0.2 1 23 370 392 370 392 0.98

6 14 4.8e-06 0.00062 21.5 1.3 1 23 406 428 406 428 0.99

7 14 5.4 7e+02 2.4 0.8 1 9 453 461 453 474 0.85

8 14 0.00056 0.072 15.0 0.9 3 23 482 502 480 502 0.97

9 14 0.00015 0.019 16.8 3.3 1 23 518 540 518 540 0.99

10 14 3.5e-06 0.00046 21.9 4.2 1 23 546 568 546 568 0.98

11 14 0.0062 0.8 11.7 5.7 1 23 574 596 574 596 0.98

12 14 1e-05 0.0013 20.5 0.4 1 23 602 624 602 624 0.98

13 14 0.00048 0.062 15.2 1.1 1 23 628 650 628 650 0.98

14 14 0.00046 0.06 15.2 0.1 1 23 658 681 658 681 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.054	7	8.7	0.3	6	20	11	25	6	27	0.92
2	14	5.2	6.7e+02	2.5	0.1	2	20	33	51	32	53	0.90
3	14	2.1	2.7e+02	3.7	0.2	1	12	209	220	209	223	0.92
4	14	4.1	5.3e+02	2.8	0.1	1	19	345	363	345	363	0.96
5	14	3.8e-05	0.0049	18.7	0.2	1	23	370	392	370	392	0.98
6	14	4.8e-06	0.00062	21.5	1.3	1	23	406	428	406	428	0.99
7	14	5.4	7e+02	2.4	0.8	1	9	453	461	453	474	0.85
8	14	0.00056	0.072	15.0	0.9	3	23	482	502	480	502	0.97
9	14	0.00015	0.019	16.8	3.3	1	23	518	540	518	540	0.99
10	14	3.5e-06	0.00046	21.9	4.2	1	23	546	568	546	568	0.98
11	14	0.0062	0.8	11.7	5.7	1	23	574	596	574	596	0.98
12	14	1e-05	0.0013	20.5	0.4	1	23	602	624	602	624	0.98
13	14	0.00048	0.062	15.2	1.1	1	23	628	650	628	650	0.98
14	14	0.00046	0.06	15.2	0.1	1	23	658	681	658	681	0.96

Sequence Information

Coding Sequence: ATGGGTCTACAAATAGATTGTTCGCTTTGTTGCGATAAAACTTTTGACTCTAAAGATGCACTGATTGAGCACCTAACCAACATTGTAAATAACATATATTGTCCTCTTTGCAATAGCAAGTGCAATTCTATAGAAGGTCTTGTAGATCACTTAACTGTTTATAATTGTATACCTCTACAAAATGACTctgtacaaaatattgttatttatgagGAAACAATGGATGTAAATAGCGTTGTTGAAAACTCAGCAGAGGCTAAAGACTCTGCATTAAATAATCTTTCACCTGCATTAAGTACAACTGACAGTCAATATATTACTGATGAGACGTACGAATGTCAAGATGAATCAGGTGAAGTTAACAAAATGTATGTCGAACTGCTCAGTAAGCAGCTATCGAAGCCTGTACTACAAGCTCAAgagttaaaattaataaaggaaGATGGAGAAAATCATTATATGATTGTTACTCAAGATGACGCAGAATTGAGTGATAGTAACGCAATAGTCACGAAACAAAATAATGATGGCACTATATCTCTAACTACAGTGAAAgatatgAAGTTGGAAATGGACACAATCATAGTTCCAGAGCCGGACTCAGAACACAAACAAAATGAGATCTACAGCTGTAATACTTGCAGAGTATCTTTCACATCAGTGCTTGACCACATACAAAACTACCATAATGATCAGGAAGTGGTTCTTGAGGAAGGTGATGAAGAAACACTTTTATCGGACAAGCAGACTGCAAGGCGTGTTATTACAGACACTGGTGATATTGTAGAGGAGCCAATGATTTTCACAGCTGAAGACACTGAAATACAGCAAGATACTATtgatGCAATTATAAAGCACCCTAAATTAGTGCTGGATAAACAAGGCCGTGCCTACACTAGACGTTTTGTGCAAATAGACAAAGTACCTGAGACCGTCACAAATCCAGCTTCTCCAGAAACGTCTGAGAAAACTGATTATCATAAAGTGGTCACAAAACAACTTCAGATGAAGACCGGCCTCACTGTCAAAATGTACAACTGTATGTCTTGCAACATAACCGTCTCGGATTTGAATGAATTCGAAGCCCATccttgtaaaatatTAAAGTACCCATGTCCTCATTGTCCAGCAGGGTATGAGAATTCGAAGTCTTTGTATGCTCATATGAAAGTGCACAAGGAGAAACCAGATGGCAGTCCCGTAGTACCCGCGTCGTATGTATGTGAGGTGTGTTCCACCGTGTTTAGAACAAACAAATCTTTGAAATTACACAGAAGAATGCATGACCCTATCAAAGCACGTCCTATAGAGCCTCCAGTTGAGAATTTCGATGGGAAGGATGTCACTGGAGCTTTATACTGCTGTGATATTTGTGACAAAATGATCCCGTTAGACTATCGCAGCGTCCACGAGAACTCGCACAAGACGACCAATAAGATGAACTGCAGTATATGCAACAAAAAGTTTACCTCAATGGAGTTTATGGAGATGCATATGAATATACACAATATAGATAAAGTGCCTATGAATAAGCAAGATAAGTCGCATCCTTACAAATGTACATACTGCAACAGAAGGTTTGCGAGACCGCATGAAAAGGTTAAACATGAAAGGATTCATACTGgTGAGAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGCTGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGAGTGTGCGCACTGCGGCAAGAGGTTCAAGGCACACAGCGTGTACAGCCACCATTTGCTGACGCACTCCGACGTTCGCGCCTACAAGTGTCCCTTCTGTCCGAAAGCTTTCAAGACGTCCGTGCAGCTCGCGGGACACAAGAATTCTCACACCAAACCATTCTCTTGCCAACATTGCAACAGGCCGTTCGCGTCTCTATACGCGGTGCGAGTTCACACAGAGACTCACAACCGACAGAACAATCTCAAGTTCTCGTGCGAGATGTGTGGGGCGAGCTACGCCCGCGCCTTCGCACTGAAGGACCACGTCAAACAAGTGCATAAGAAAGATTTGTACAGCCCGGACACTATAGTGGAGAATAGTCAAGAGGATAGCACCGATTGGATCATTACAAGAGAGTCCTCTGAACCAGAAGGCATGCAATCTCTGAACAAGGATTTACAAGAAACGGCAACAGTTAGTTTGATAGGAGGGAAGAGGAGAGAAGAGGAGAGAGGAGAGGAGATTAGATGGGAATTGACACTCCGATGA
Protein Sequence: MGLQIDCSLCCDKTFDSKDALIEHLTNIVNNIYCPLCNSKCNSIEGLVDHLTVYNCIPLQNDSVQNIVIYEETMDVNSVVENSAEAKDSALNNLSPALSTTDSQYITDETYECQDESGEVNKMYVELLSKQLSKPVLQAQELKLIKEDGENHYMIVTQDDAELSDSNAIVTKQNNDGTISLTTVKDMKLEMDTIIVPEPDSEHKQNEIYSCNTCRVSFTSVLDHIQNYHNDQEVVLEEGDEETLLSDKQTARRVITDTGDIVEEPMIFTAEDTEIQQDTIDAIIKHPKLVLDKQGRAYTRRFVQIDKVPETVTNPASPETSEKTDYHKVVTKQLQMKTGLTVKMYNCMSCNITVSDLNEFEAHPCKILKYPCPHCPAGYENSKSLYAHMKVHKEKPDGSPVVPASYVCEVCSTVFRTNKSLKLHRRMHDPIKARPIEPPVENFDGKDVTGALYCCDICDKMIPLDYRSVHENSHKTTNKMNCSICNKKFTSMEFMEMHMNIHNIDKVPMNKQDKSHPYKCTYCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVLYCLTLHMRTHTGARPYECAHCGKRFKAHSVYSHHLLTHSDVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHNRQNNLKFSCEMCGASYARAFALKDHVKQVHKKDLYSPDTIVENSQEDSTDWIITRESSEPEGMQSLNKDLQETATVSLIGGKRREEERGEEIRWELTLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00909102;
90% Identity: iTF_01166960;
80% Identity: -