Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759254.1:13108780-13111731[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.16 21 7.2 0.1 5 23 361 379 360 379 0.96

2 12 0.041 5.2 9.1 0.4 3 23 387 407 385 407 0.93

3 12 1.6 2.1e+02 4.1 0.3 2 23 415 436 414 436 0.90

4 12 5.8e-07 7.5e-05 24.4 1.0 2 23 442 463 442 463 0.98

5 12 0.0033 0.42 12.6 4.3 1 23 469 491 469 491 0.98

6 12 1.2e-05 0.0015 20.2 1.3 1 20 495 514 495 516 0.94

7 12 0.00023 0.03 16.2 0.2 1 23 549 572 549 572 0.95

8 12 0.0013 0.16 13.9 0.0 3 23 581 601 580 601 0.98

9 12 3.2e-05 0.0041 18.9 0.4 1 23 612 634 612 634 0.98

10 12 8.6e-05 0.011 17.5 4.5 1 23 640 662 640 662 0.98

11 12 0.0032 0.41 12.6 0.3 3 23 670 690 668 690 0.98

12 12 2.2e-05 0.0029 19.4 0.8 1 23 696 719 696 719 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.16	21	7.2	0.1	5	23	361	379	360	379	0.96
2	12	0.041	5.2	9.1	0.4	3	23	387	407	385	407	0.93
3	12	1.6	2.1e+02	4.1	0.3	2	23	415	436	414	436	0.90
4	12	5.8e-07	7.5e-05	24.4	1.0	2	23	442	463	442	463	0.98
5	12	0.0033	0.42	12.6	4.3	1	23	469	491	469	491	0.98
6	12	1.2e-05	0.0015	20.2	1.3	1	20	495	514	495	516	0.94
7	12	0.00023	0.03	16.2	0.2	1	23	549	572	549	572	0.95
8	12	0.0013	0.16	13.9	0.0	3	23	581	601	580	601	0.98
9	12	3.2e-05	0.0041	18.9	0.4	1	23	612	634	612	634	0.98
10	12	8.6e-05	0.011	17.5	4.5	1	23	640	662	640	662	0.98
11	12	0.0032	0.41	12.6	0.3	3	23	670	690	668	690	0.98
12	12	2.2e-05	0.0029	19.4	0.8	1	23	696	719	696	719	0.96

Sequence Information

Coding Sequence: ATGGATACGTGGGCCAATCTTTGTCGGTGTTGTTTGTCTGCCAATTGTGAAGTGTCATTGTTAGATAGAGAGCAAAATGTTAATGAAAAGTTTCTTGAAGTCACTACAATTGAGgTAAGAGAAGACGATGGTCTACCACAGAAGCTGTGCAATGACTGTTACAGCACCATGATTTCTGCGCATCAGTTTCGTAAACAGTGCATTAAGATGGATAATGAATTGAAATTACAAATTAGTGCTCTGTTAGACTCGGAAGAAGCAGATGAACTAAAACATCATACAGCCCTTCCAGAATTGAATTCatgtgaagaagaagaagaagaagatgatgatgatattgcaAACGATCCTGTGAAGCAATTAGaagctataataaaaaaagaacctaCTGACAgtgatgatgattattattatgtgttagTGATAGATGATCCTAAGGATAAAGGTAATGGAGAAAAGGAAAAATTTCCAGAACCGCAACTTGAAGATAAAATCAAAGTTGAATCTGAACACAACAATGAACCTATTTTCGAACCAGTGAAGAGTCAAAGCACTCCACAGAATCAGTATGACGATTCAATTGAAGCTTTCTTAATGTCTAATAACAAAGTCCCAGCAAATGTACCAGCTACTATTCTAGAAAACGAAGAAGAATGTCAGGAAACTGATGAATTAGATGACGCTATGAACATTGATGAAACACAAGACAGTAGTTCTCAGGATCAACTGCTAACACATATTGAAGATTCGCAAGATGGTCAAATCATCGAAACAATAACACCTGATGATATTAAAGATCtgccaaataaaaattacatcaaGATATTAACAACTACCGACTCCAATGGTACTATCCTTCTAAAGGGTAATGATAGGATACAATATCTGACTGACACACAACTAGTCACAAATGAGGATGAGGATGGAGATGCTATGTCTCAAGAAGTCATATTCTGTGAAGGAGATGACTCCTCTCAATTCCAAATATTAAAGTATGATGGCTCAGAATTAGTCATAGAGTATGCAGATGAAGGTCATATATCCACAGTTCTTCAACAAGAAGATGGCACATTTTTATGTGAATGCGGAGAACAGTTCGAGGACATAGCCGACTATGAAAAGCATCAATACAAACACAACCCTGCTGGGGAACACTTGTGCAATTTATGCGGCAAAGGTTTTGAATCTACCGAGATTTTAACAGGACACATGCTACTACACAGTAGCACTGGACTATTGATCAGCTGTCCCTTCTGCAATCAGCTTATAAGACGCAatgcgttgactcaacatatcAAATATGGTCACAATAATATTAAACCTCGCTGTAACGTTTGCTTCAAGACCTTCGCAAATCCAAATAACTTAAAACGGCATATGATGATCCATAGCGGCATCAGAGAATTTGAATGTGATATTTGCTTCAAAAGATTCCACCAGAAGATTACTATGCAGACACATCGGCTTACTCATATGCATCCATACTCTTGCAATCAATGTGACAAAACTTTCCAAACAAAGAGTAACTTGACATTGCACAAGGAGTCCGATCAATGTACGAAATCTAAGGTTATTAAAGTTAAGGAAGAATTAATGAAGACTGTGAAGCAAGAAATTACCACAAATCTTGGCAAACTCTTAGGATATGCTTGTTCTTTATGCAAGAAAATGTTTTCTGTTGAATCAGCCTTGGAGCAACATGTTGAAAGTACTCATATCATAGATCCAACTGACTTGCTATGTTCGGAATGCGGTGAAGTGTTACCAAATAAGAGAGATATGCAAGCCCACATTGCAACGCACAAAAATCTTAAAGCAAAAAATGCAAAGAGATTTGAGTGCAGCATTTGTGGTAAAGGATGTTCAAGCCAGGCTATGTTGCTTATGCATGAACGGGTCCACACGAATGAAAGACCGTTCCCTTGCCAGCTATGCTCTCTCCGTTTTAAGACCAAAACTCATTTACGCACCCATCAATTGACTCATACAAGGGAAAAGAAATTTGGGTGTTCAGTTTGTATGAAGTTCTTTGCATTAAAAGGTAACTTAGTGGTTCATTTGAGAACTCATACAGGTGAGAGACCGTATGTTTGTTCTTTATGCGGAGAGGCTTTCATAGATTCTAAATATTTGAAGAAGCATAAACTTAAGAAGCATTCAATAGACAACGTTCCATGGAACCAGTACTAA
Protein Sequence: MDTWANLCRCCLSANCEVSLLDREQNVNEKFLEVTTIEVREDDGLPQKLCNDCYSTMISAHQFRKQCIKMDNELKLQISALLDSEEADELKHHTALPELNSCEEEEEEDDDDIANDPVKQLEAIIKKEPTDSDDDYYYVLVIDDPKDKGNGEKEKFPEPQLEDKIKVESEHNNEPIFEPVKSQSTPQNQYDDSIEAFLMSNNKVPANVPATILENEEECQETDELDDAMNIDETQDSSSQDQLLTHIEDSQDGQIIETITPDDIKDLPNKNYIKILTTTDSNGTILLKGNDRIQYLTDTQLVTNEDEDGDAMSQEVIFCEGDDSSQFQILKYDGSELVIEYADEGHISTVLQQEDGTFLCECGEQFEDIADYEKHQYKHNPAGEHLCNLCGKGFESTEILTGHMLLHSSTGLLISCPFCNQLIRRNALTQHIKYGHNNIKPRCNVCFKTFANPNNLKRHMMIHSGIREFECDICFKRFHQKITMQTHRLTHMHPYSCNQCDKTFQTKSNLTLHKESDQCTKSKVIKVKEELMKTVKQEITTNLGKLLGYACSLCKKMFSVESALEQHVESTHIIDPTDLLCSECGEVLPNKRDMQAHIATHKNLKAKNAKRFECSICGKGCSSQAMLLMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSLCGEAFIDSKYLKKHKLKKHSIDNVPWNQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198026;
90% Identity: iTF_01166951;
80% Identity: -