Egri043575.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- zfy1
- Assembly
- GCA_963662185.1
- Location
- OY759257.1:13639061-13672921[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00025 0.033 16.1 1.8 1 23 31 53 31 53 0.98 2 15 0.0067 0.87 11.6 4.5 1 23 59 82 59 82 0.97 3 15 1.7e-06 0.00022 22.9 0.9 2 23 89 110 89 110 0.97 4 15 0.0003 0.039 15.8 3.8 1 23 116 138 116 138 0.98 5 15 0.0022 0.29 13.1 6.3 1 23 144 166 144 166 0.97 6 15 0.00057 0.073 15.0 0.2 1 23 173 196 173 196 0.93 7 15 1.6e-05 0.002 19.9 0.7 1 23 204 227 204 227 0.97 8 15 0.039 5 9.2 0.1 2 23 234 254 233 254 0.95 9 15 2.3e-06 0.00029 22.5 2.2 1 23 260 284 260 284 0.98 10 15 6.3e-05 0.0081 18.0 2.7 1 23 290 312 290 312 0.98 11 15 0.0038 0.49 12.4 1.5 1 23 318 341 318 341 0.97 12 15 0.059 7.6 8.6 1.8 1 23 348 371 348 371 0.96 13 15 0.016 2 10.4 0.6 2 23 378 400 378 400 0.95 14 15 0.073 9.4 8.3 5.0 1 19 838 856 838 860 0.92 15 15 0.013 1.7 10.7 0.5 1 23 1017 1039 1017 1039 0.98
Sequence Information
- Coding Sequence
- ATGGCTCCCTCAAAAAGCTCAAAAAAGGCTGCTTCCAAAACTATTGTTTCAAAAAGGTTTACTTTGGAAAAAGTTAAAGACAAAATTGTATACCAATGTTCAGAATGTGACAAGACATTCATGGAAAACTCAGCGTACCACCTCCACGTAAGACTGCATGCTGAAGTTTACCCGTACTCATGCGACCAATGTGACTACAAGTGCAAAGTGAAAAAGTACCTATCTCGGCACGTGAAGAAAGTGCACAACAAAGCCAACGGGCCCGAGTGTCCAGTCTGCGGGAAAGTGTTCCACTTTGATTCTAATCTTAAGAATCATATGCGTGTTCATACAGGAGAGAAGCCCTACAAGTGTACTGTGTGCAAGAAGGCCTTCAGCTCGAGCTACTGCCTCTCCATGCACAAGCTTATACATACTCAGGAAAAGCCGTTCCATTGCAAGTTCTGTCCTTACGCGTGTAGGGACAGTTCTACGCTGAGGAAGCACCAGGAGAGGCATTTGGGCATCCTCAAGGAGTATCCatgcaataaatgtaaaaaagttttGAAGTCTAGTATGTCATTGAGAATACACATAGACGAGGTACATTACGGGCTGGACACTCGGAAATTTAACTGCGAGAAGTGCGTCAAGGCTTTCAAGACGAAAGCATCTCTCAACATGCATGTGAGGACAGTCCACGATAAGGTCACCCGCATCGAGTGCGAGATCTGCGGTCGCAGCGTCACGAAGAACAACATCAGCAGTCACCTGCAGTCGCACGTCGACATCAGACCGTACCAGTGCAGCTTCGCCACCTGCGGGAAGAACTTCAAAGATAGAAGCACGCTCCGCAAACACACTCGTATTCACTACCCCGAGTGTCACTACCAGTGCGACATGTGCGACCGAAAGTTTTCCCGCAAGGTGCGCCTGAGGGAACACAAGATGAAACATGTCACCGCCGGCGGGTACACCTGCGACTACTGCGGGGTCTCATATGTCCGGAAATCCTTCATAACGTTCCATATCAGAACAAAACATGGTCCGAATGGCGAGAGGTACATATGTGACAAGTGTGGTCTGACAACTTATACCAAGAAATGTATCATATTACATCTCAGATATGGTCACGGAACCGCTCAAgatAGAAAATGCTCAATATGTTCAGAAGTTGTGACCACCAGCAATCTCCTGAAAGAGCACTACTTCAAGTTACATCAAATTAAGTTCGTAGTACAGAAACGAGAAGATGATAAAAGAGTTGTAATTAAAGAGGAACCTTTGGAACTCAATGCAGAGTTTGATTTTAACTATGATGTGCAGAAGATAGAGATGGATGAACACGTGTCAGACCGAGAATACGAAGATACAGTGACCACCATAGCATACTCCACCCAGGTGCTGGAGGAAGACATGTCCAGGACTGAGGAGGATCAGGACGAGTTCCACCAGTTCTTCGCGAGGCAGATCATGAACCAACCCACGAGGCAGACCAATATACCAGAACCGGAGTACGTGGATGCAGAGACAACCCTAGCGTACTCCGAGAAGGTTCTAGAGGAGGATATCTCTAGGAGTTTACTGGAGAGAGGGAAGCAGGAGGTCCCGGAGACCTCCTTCGATGAGTTCTTCCTGCAGCAGGTGTTGAGCACACCCAAACCGAAAGagCTTCCAAAGAAAAAGATGGTAAAGGTGGACAAGCGCAAAGTAGCGTCCGTGAAGCGCTCCGTGGCGCGCCTGCTGGCGGCCagccgcgcgcgccgccgcgccgacgcACTCGACGCCGCGCGGCGCGCCTACAACGAGCGCGTgcgcgccgcgcgcgccgcaGAACCAAAGAAGATAACATACTTCAAAAAATCGGCCACCATTCAAGATAATAATTCACTACCAAATAACATCACAACCAATCACAATGATACGTCTGATAATGACTCGTCACAAGACGACCAACCGCTAAACAGATTACGAAATAAAACTGTCGATGATACATCACAAAATCATAGCTCTAGTAATGATACAGTACAAAATGGTGAAGTTGAAAATGAAAGTGataaattacaaaatgataATGTATTATCACATAGCGATACAAGTGATAGCTTACAGAATGAGAATACTAGCTCGCTAACAAATGATCAACTTGCCAATCATGTATCACAAAATCATTTATCTAATAATGAATCATTACATAGTAAACCTGTTACCGAAAACTCACAAAACGATAATGATACATCACAAAATGAAAATCACAACAATGATACATCACAAAATGATAAATCTATCAACGATACATCACCAAATACCGAACCTGATAACATCACATCAGATATCACAGAATTTGACCAAGAAAAGAACAAAATTGGTGATGATGATACAATATATGATATTCCAATCGCACAACGTATCACTAGGAATAGAAAGAACAAGCTAAGGAATCGGAAAGCAGTGAGATGTGATAAAGATAGTGATAATATGTGTGATGATAGAGAGAGTTCTAATAAAAATGGGAAAATCACGTTTGATGGACATGAGTGCTACATATGTTTTAAGATCTTCAAAACGAAAAACGACCTTAAAATGCACTGCAGTGAACACTTCGACGTTTGCAACGAGAAAATGCTCAAAAAATGTCCCTTCTGCGGCTATGTCACcaatttaaacataaaaagaCACGTCGAACTCGCTCACAAGATCAACATCAGCTACGCATACGGACATATTACCGAGAAAAAGAACTCTGATGGATCAAAATATGTCCTTGAACTAAATAACGACCGGGAATTAGAAATCATACCAAGTATTAGTAACCTTAATAAAATCGCTTGTATGAAAAACGATGAAAAAAtacgtcaaaataaaaatctatttttcgGTAAAACTAAATTGGTAAAAAAAGGTAAAGAGTGGGTAGTTGAAAAACAAGCTGTGAAGTTAAACGACCAGTATCTATTGCCGGAGTTTACTGAAGAAGagtattcaaatttaaaaatagaaggtGATAGTTACGTGGATAGGATTAAAAAGCTTAGTTATTTGGCTAAAAGGCGGGGAGTCAAGATGTTGTACCCATGTGGGGGTTGTGAAAAGATTTGCCAGACTTTGGCTGCGCTCAAACTGCATAATAGAAAACACGAAGTCAATCCAAAGGCGTTTAAACCAAAAAAATGGATCAACAGGCATATCGAGTACAAAACGCTAAGgcgtaaaagtaaaaaaagtaataaagttTTCAAAAAACCGGTGCGAGAAATACCGGTTAAAATATCACTACCATCAGATAACCGATTCGCGTCGCCGCAACCGgtcaaaaataaacataaatgtgATAAACAATTGATTGAATTTTATAAATCTAATATCAAAGGCGGTGATATAGAATTCTGGCAATTTTTAAAGATTTTCAACAAAATGAGTCGAGAAAATGTCAATGATTTCGCTGACTTAGAAAATCGGGACGACTTACATTTTGGTGTACATTGTTTATCAACGAACGAACCGGTTAATACGGAAGTCGTACCGGTAGTAACCGAAAAAGAACCGGTACGTACCGAAAAAGAACCGGTACATGCCGAAAGTGAACCGGTACAAAAAAATATCGGTAAAAGTAGGAAAAATGTTAGCAAAAAATTTACTAGAGCGATAATGATTagcaaaaaagaatatatgAGAAGAATGGAGATTAAGAACCAAATGAGGAAGAGATTGGAGGAGATTAGAGTTTAG
- Protein Sequence
- MAPSKSSKKAASKTIVSKRFTLEKVKDKIVYQCSECDKTFMENSAYHLHVRLHAEVYPYSCDQCDYKCKVKKYLSRHVKKVHNKANGPECPVCGKVFHFDSNLKNHMRVHTGEKPYKCTVCKKAFSSSYCLSMHKLIHTQEKPFHCKFCPYACRDSSTLRKHQERHLGILKEYPCNKCKKVLKSSMSLRIHIDEVHYGLDTRKFNCEKCVKAFKTKASLNMHVRTVHDKVTRIECEICGRSVTKNNISSHLQSHVDIRPYQCSFATCGKNFKDRSTLRKHTRIHYPECHYQCDMCDRKFSRKVRLREHKMKHVTAGGYTCDYCGVSYVRKSFITFHIRTKHGPNGERYICDKCGLTTYTKKCIILHLRYGHGTAQDRKCSICSEVVTTSNLLKEHYFKLHQIKFVVQKREDDKRVVIKEEPLELNAEFDFNYDVQKIEMDEHVSDREYEDTVTTIAYSTQVLEEDMSRTEEDQDEFHQFFARQIMNQPTRQTNIPEPEYVDAETTLAYSEKVLEEDISRSLLERGKQEVPETSFDEFFLQQVLSTPKPKELPKKKMVKVDKRKVASVKRSVARLLAASRARRRADALDAARRAYNERVRAARAAEPKKITYFKKSATIQDNNSLPNNITTNHNDTSDNDSSQDDQPLNRLRNKTVDDTSQNHSSSNDTVQNGEVENESDKLQNDNVLSHSDTSDSLQNENTSSLTNDQLANHVSQNHLSNNESLHSKPVTENSQNDNDTSQNENHNNDTSQNDKSINDTSPNTEPDNITSDITEFDQEKNKIGDDDTIYDIPIAQRITRNRKNKLRNRKAVRCDKDSDNMCDDRESSNKNGKITFDGHECYICFKIFKTKNDLKMHCSEHFDVCNEKMLKKCPFCGYVTNLNIKRHVELAHKINISYAYGHITEKKNSDGSKYVLELNNDRELEIIPSISNLNKIACMKNDEKIRQNKNLFFGKTKLVKKGKEWVVEKQAVKLNDQYLLPEFTEEEYSNLKIEGDSYVDRIKKLSYLAKRRGVKMLYPCGGCEKICQTLAALKLHNRKHEVNPKAFKPKKWINRHIEYKTLRRKSKKSNKVFKKPVREIPVKISLPSDNRFASPQPVKNKHKCDKQLIEFYKSNIKGGDIEFWQFLKIFNKMSRENVNDFADLENRDDLHFGVHCLSTNEPVNTEVVPVVTEKEPVRTEKEPVHAESEPVQKNIGKSRKNVSKKFTRAIMISKKEYMRRMEIKNQMRKRLEEIRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01166985;
- 90% Identity
- -
- 80% Identity
- -