Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759236.1:20233420-20245747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.036 4.6 9.3 6.6 1 23 208 231 208 231 0.98

2 12 0.0024 0.31 13.0 0.7 1 23 240 262 240 262 0.93

3 12 0.00043 0.055 15.4 6.2 2 23 269 290 268 290 0.97

4 12 0.00068 0.088 14.7 1.7 3 23 298 318 298 318 0.97

5 12 9.5e-05 0.012 17.4 1.0 1 23 327 349 327 349 0.95

6 12 0.00015 0.019 16.8 1.7 2 23 356 377 355 377 0.95

7 12 0.0013 0.17 13.8 8.9 1 23 383 405 383 405 0.98

8 12 7.5e-09 9.7e-07 30.3 0.6 1 23 411 433 411 433 0.99

9 12 1.2e-05 0.0015 20.3 0.9 1 23 439 461 439 461 0.98

10 12 7.1e-05 0.0091 17.8 0.4 1 23 467 488 467 488 0.97

11 12 0.0083 1.1 11.3 1.2 1 23 494 516 494 516 0.94

12 12 6.2e-06 0.0008 21.1 3.1 1 23 522 544 522 544 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.036	4.6	9.3	6.6	1	23	208	231	208	231	0.98
2	12	0.0024	0.31	13.0	0.7	1	23	240	262	240	262	0.93
3	12	0.00043	0.055	15.4	6.2	2	23	269	290	268	290	0.97
4	12	0.00068	0.088	14.7	1.7	3	23	298	318	298	318	0.97
5	12	9.5e-05	0.012	17.4	1.0	1	23	327	349	327	349	0.95
6	12	0.00015	0.019	16.8	1.7	2	23	356	377	355	377	0.95
7	12	0.0013	0.17	13.8	8.9	1	23	383	405	383	405	0.98
8	12	7.5e-09	9.7e-07	30.3	0.6	1	23	411	433	411	433	0.99
9	12	1.2e-05	0.0015	20.3	0.9	1	23	439	461	439	461	0.98
10	12	7.1e-05	0.0091	17.8	0.4	1	23	467	488	467	488	0.97
11	12	0.0083	1.1	11.3	1.2	1	23	494	516	494	516	0.94
12	12	6.2e-06	0.0008	21.1	3.1	1	23	522	544	522	544	0.99

Sequence Information

Coding Sequence: ATGGAGTCTAAAGAAAATGATGAAACGAAGGAAGAGCAGAACTTCATAGAAATAGAAATACCGTATACCCTATTTCAGTACCTAAGCACAGAAAACTACAATGTACAAAATATATGTCGAATATGCCTATCTACAAACAGTGAGGTTTTATATCCTTTGGTATCTTCTGAGGCAAAGAATTTTCTAGCTGACATGTTTGTGGCATTGACTACTATACAACCTACTCCAGATGATGGTCTACCGTCCAGCATATGTGAGCCATGTCAAACCCTTGTGGTACAGTATTATGAGTTCAAAATCAAGTGCGAGAAGTCAGAATGTACGCTTAGTTCAATCTTGAAAGGAGAGTTTATAGCTAAGGAGGAGCCACCTGATCATGCAATgCATATTAAACAAGAAGAAACCATCATAGACAACaaatgtgatattaaagaagAGGAAGAATTAGTAGAAGATGTGCAATATTTAGAGGATCTCAGTGGTGATACCAACGACAATGACAAGTCATATTTAGTGGAGGATATCAGTAAAAGAATAAGaCGAAAGTTAAAAAAGGCTCTAAAAGAATCCCTAGATAATGACCATTCTGTAAAGAAACagttgaagaaaaaacagaaatcatATTCCTGTGGTCATTGCTCTAAAGTCTTTTTTAAAGCCAAAACATTCCACATGCATGTTAAAACCAAGCATGGCACTAAACGTGAGAAGCGGCCGTACCCGTGTAGCCAGTGCAATGAGTCGTTTAATTCTGAACATGACATGACTGTACACTCAGCATTACATGTTAAGGATAATTTGTGGAAATGCAACCAATGTCAGAAACAGTGTACTACGAAGACGACTCTGCGCCGCCACCTGCAGCGCCACATGCTGTCCAAGCCGCACGGCTGCGCGTCGTGCCACAAGACGTTCACGGAGCTGTACGCGCTGCGGCGGCACGCGCGCGTGCACACCGGCGAGCGCGTCGAGAAGAAGCACGCCTGCCACATCTGCGACAAGAGGTACTCGGAGAGCGGGCTCCTGACGGCGCACGTGGCGCGGCACGTGGGCGCGCGGCCGTGCGAGTGCGCCACGTGCCACAAGCGCTTCCCGTCGCCGCGCCTGCTCGCCTCGCACATGCTCGTGCACACCGACCTCAAGCCCTACGCCTGCGACCACTGCGACAAACGTTTCCGCCACGAGTCGACCCGCAACACTCACCACCGCACGCACACCGGCGAGAAGCCGTACGTGTGCTCCGTTTGCGGGAAGAACTTCATACAGAACTCCAATCTTACTCTGCATATGCGAACTCATACAGGTGAGCGTCCATACTCTTGCAACATGTGCGAGCGCAAGTTCGCTTCAGGCTCGTCACTCAAGAGCCACCAACGCATTCACACCGGGGAACGACCTTACAGCTGTAAAATTTGTGGGAAAAGTTTCGCGCGGATGAACTTGGGTGcccacatgcgtcagcacacTGGCGAGCGTCCGTTCGCCTGTACCGCGTGTCCCAAGAAGTTCGCAAGCGCGTCGCGGCTGCGCGAGCACTGCCGGATACACACCGGTGAAAAACCATATGAATGTGCGTATTGCACGTACACATACGCCACTAAATCACATCTAGTCAAACATTTAAAAACACATGACCCACCAAAGAAGAAAAACGGTCCAAAACGTAAAGTCATCTTAGTACAGCAAGCCCCTTGCAATCCTCCAGTCGCTGACAAAGAAAAGGAAGATTTAGTAATTGTTACCGAGAATACTGCAAAAGAACCGAACAAAATAGACGATATACGTTTTGATGTGGTTCACGATGTTCCGTTAGAAGTGAAAGGAGAATTAATTCCACAAGATGATAACAACATGAAGGCCGAATTATTAGTTGTAGATAATAGCCAAAGTAACTACCCAATAAGTAATGAAGATGTATGTTTGAATTCTGGCACTGTGAGTGTCATAAACGGTGAAGTGAATTATGGAAGTGATATGAACCTAGTGACGGTGAACGAGGGAGGCGTCAGTATCTCGGCGTCGACTCTCGAAGGGTCGACGGTGAAGCTGTATCAGTTAGACCAAAGTTTAGTACAAATACACAGTTCTGCTGGTCAGGTTACAATCAGTAAGATTACTAGCAAAATGACCGCAAATTTTTAA
Protein Sequence: MESKENDETKEEQNFIEIEIPYTLFQYLSTENYNVQNICRICLSTNSEVLYPLVSSEAKNFLADMFVALTTIQPTPDDGLPSSICEPCQTLVVQYYEFKIKCEKSECTLSSILKGEFIAKEEPPDHAMHIKQEETIIDNKCDIKEEEELVEDVQYLEDLSGDTNDNDKSYLVEDISKRIRRKLKKALKESLDNDHSVKKQLKKKQKSYSCGHCSKVFFKAKTFHMHVKTKHGTKREKRPYPCSQCNESFNSEHDMTVHSALHVKDNLWKCNQCQKQCTTKTTLRRHLQRHMLSKPHGCASCHKTFTELYALRRHARVHTGERVEKKHACHICDKRYSESGLLTAHVARHVGARPCECATCHKRFPSPRLLASHMLVHTDLKPYACDHCDKRFRHESTRNTHHRTHTGEKPYVCSVCGKNFIQNSNLTLHMRTHTGERPYSCNMCERKFASGSSLKSHQRIHTGERPYSCKICGKSFARMNLGAHMRQHTGERPFACTACPKKFASASRLREHCRIHTGEKPYECAYCTYTYATKSHLVKHLKTHDPPKKKNGPKRKVILVQQAPCNPPVADKEKEDLVIVTENTAKEPNKIDDIRFDVVHDVPLEVKGELIPQDDNNMKAELLVVDNSQSNYPISNEDVCLNSGTVSVINGEVNYGSDMNLVTVNEGGVSISASTLEGSTVKLYQLDQSLVQIHSSAGQVTISKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00636752; iTF_00405271;
90% Identity: -
80% Identity: -