Egri041453.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema griseolum
Gene Symbol
-
Assembly
GCA_963662185.1
Location
OY759255.1:15967119-16004015[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1.6 2.1e+02 4.1 0.1 1 23 509 531 509 531 0.95
2 21 0.0082 1.1 11.3 0.1 1 23 542 564 542 564 0.95
3 21 0.0002 0.025 16.4 4.5 1 23 570 592 570 592 0.98
4 21 0.0082 1.1 11.3 0.1 1 23 714 736 714 736 0.95
5 21 0.0002 0.025 16.4 4.5 1 23 742 764 742 764 0.98
6 21 0.0029 0.37 12.8 5.6 1 23 817 839 817 839 0.99
7 21 9.3e-06 0.0012 20.6 0.4 1 23 845 867 845 867 0.93
8 21 4.9e-07 6.3e-05 24.6 0.6 1 23 873 895 873 895 0.98
9 21 1.2e-05 0.0015 20.3 1.2 1 23 901 924 901 924 0.96
10 21 1.1 1.4e+02 4.6 3.1 1 14 930 943 930 952 0.79
11 21 0.005 0.64 12.0 1.1 5 23 1047 1066 1045 1066 0.94
12 21 1.1 1.4e+02 4.6 3.1 1 14 1072 1085 1072 1094 0.79
13 21 0.005 0.64 12.0 1.1 5 23 1189 1208 1187 1208 0.94
14 21 1.1 1.4e+02 4.6 3.1 1 14 1214 1227 1214 1236 0.79
15 21 0.005 0.64 12.0 1.1 5 23 1331 1350 1329 1350 0.94
16 21 1.1 1.4e+02 4.6 3.1 1 14 1356 1369 1356 1378 0.79
17 21 0.005 0.64 12.0 1.1 5 23 1473 1492 1471 1492 0.94
18 21 0.002 0.26 13.2 4.8 1 23 1498 1521 1498 1521 0.94
19 21 8.1e-06 0.0011 20.8 0.5 2 23 1528 1549 1527 1549 0.97
20 21 2.7e-05 0.0035 19.1 0.4 1 23 1555 1577 1555 1577 0.96
21 21 0.016 2.1 10.4 0.1 1 23 1583 1607 1583 1607 0.92

Sequence Information

Coding Sequence
ATGGCGGGCCAGTGCTGTCTAATATGTAACAGCAGAATTGTGTCCACTGTCAGAAACTCTTACAATATATTCGATGAGCTTACAATATCTTTTGTTGGTAAAGATGATGCGCCTATTCCAACCTCATTACAATCTAGAAAGAAGCTGTCCGAAGTTGTGAGCGATATACTTGGTCTGCCCGTAGAAGAGAATAAAGTGCACTCCAATACACTATGCAAGAAGTGCTACAAGTCATGCATGGAATATGATATGATCCATACTCGattaaCCAACCTAAAAACCGAAATCCTAGACCAATTCAAGGATTCTCTTACTTATCACAGCATAGACTATGAAAACTATAAGAAATCATTGGCTGAGAAGAATACTTCTCCTCCAATAGTAAAAAAAGAGTCTGCTGTCCTTGGCAAGAAATTAGTGTTGCCAGCGTCGAAGTTACAACCTATACCTCCTGATTTGTTGTTGAAAGTTGGAAAATTTCCTGGTTCGTTTAAGGGTAATATTGTTTTACCTCAATTTAAGACAGCAAACGCATCTACCCTCAACCTAAAAGTTACTGTCGGAACATCAGTACTCACACAGACAATTAAAACTACAACGACCACCAGCGCAAGTTCCAAACAGGCATCGAACCTGCTATCATCTTTCACCAACTCTATAAAGGACGAGATAGAAACCTTGACCACTTCACAGAGTCATACGTCACCAAAGACATCAATATTGAATTTCAACGTTAACTCATTGCCAAAGGACTTCTTATCTGAGGCTGTGTTAACTAAGATGGGTGATGAGGAAAATGGAGATGGTAAAAGTGATGAGGAAGTACAAGAAAATGAGGGTGATCAGTCTATGGAGATTGATGAAGATTGTTCTCTTTCCTTGATTCCGGTGTCGACGGCTGACAGTAAAAGCTTGGTTTTGGAAGTTGAAGGAATGAAGTCTAATTCCAAAGACACCGAAGAAACAGAGTGGAACATTGAAGAGTTGCAGTCTTTAGACAGCACAAACGAGGAACACAAGTATATCTTGGGCAAGCTGCAGATCCTCAATGAGGGAGACGATGAAATCGATGAAGATGAGGAGGCACACACAATCGTGGTGGATAGTGAGAACGGGTCCATACTCCGCATGGTCTCCGGCCAGAAGTTCATGTATGAGGGGGGCGAGATCTCGCTGGTGATGACCGATGATGACCAGCAGCAAGACGAGAGCAACGGCCTCAACGATGAACAGGGCGACGATTCAAATGAAGAGACAGCGATAGAATTGCAAATGGCTGGTGACGAGGAGACTGCGAATGCTATACTAGCCGCTGCCCAAGAACAAGGCGGCGCGTTCATCAAGGTGGAGTCGGGCGAGATGTTCCGCGTGCAGCCCGCCGCGCGGCCGCGCCTCGTGGCGAGGCGAGGCGACGGCTTCCAGTGCCTGCTGTGCCACCAGAACGACGATGGCGACAAGCCGCGCGTGACGGGGGACGCGGAGTCCATGATGCGTCACCTCAAGCGCTTCCACGACGCTCGCATCTACATCTGCCCGTTCTGCTCGGCCATCATGAGGAAGAAGGTGGACTATACTGCGCACATAGCGGAGCACGCGACCAAGCTGAAGGGCGGGCGCGCGTCGCACATGTGCGCCGCGTGCGGCAAGACGTTCGGCAGCCGCGCGCTGCTGCTGGAGCACGCCAACGTGCACGCGGGGCTGCGCCCGCACCGCTGCGAGCTGTGCCACAAGGCCTTCGCGTCCAAGTACACCTACCAGGCGCACGTCAAGACGCATGCGGTACGTATGCGCGTCCCACATGTGCGCCGCGTGCGGCAAGACGTTCGGCAGCCGCGCGCTGCTGCTGGAGCACGCCAACGTGCACGCGGGGCTGCGCCCGCACCGCTGCGAGCTGTGCCACAAGGCCTTCGCGTCCAAGTACACCTACCAGGCGCACGTCAAGACGCATGCGGTACGTATGCGCGTCCCACATGTGCGCCGCGTGCGGCAAGACGTTCGGCAGCCGCGCGCTGCTGCTGGAGCACGCCAACGTGCACGCGGGGCTGCGCCCGCACCGCTGCGAGCTGTGCCACAAGGCCTTCGCGTCCAAGTACACCTACCAGGCGCACGTCAAGACGCATGCGGTACGTATGCGCGTCCCACATGTGCGCCGCGTGCGGCAAGACGTTCGGCAGCCGCGCGCTGCTGCTGGAGCACGCCAACGTGCACGCGGGGCTGCGCCCGCACCGCTGCGAGCTGTGCCACAAGGCCTTCGCGTCCAAGTACACCTACCAGGCGCACGTCAAGACGCATGCGGTACGTATGCGCGTCCCACATGTGCGCCGCGTGCGGCAAGACGTTCGGCAGCCGCGCGCTGCTGCTGGAGCACGCCAACGTGCACGCGGGGCTGCGCCCGCACCGCTGCGAGCTGTGCCACAAGGCCTTCGCGTCCAAAATCGACCTCGGCCATACAAATGCAGCCAGTGTACGAAGACTTTCTTGACACAACAGCATCTCAATCAGCACGAGAAAACTCATTCTGGTATCAAGGATTTCGTCTGTAATGTATGCAATAAGGCGTTCAGCACACAACACAACTTGGAGGTACACGGAGTGGTGCACTCCGGGAACAAAGCCTTCAGTTGTAGCGAATGTTCCAAGGCCTTCGCGAGGAGGGCAGAGCTGCGGGATCACATGCGGACACACACCGGCGAGCGGCCCTACCCGTGCGACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTACCACTCACATATCATATACATACATCTGCGGCGCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACAAGCGGCACCACTGCACGCTCTGCCCCAAGCGCTTCAAGCGGAGGAGGTTGCTGGAGTACCACATAAAGGCGTCTCACACGGGCGAGCGGCCGCTCAAGTGCGAGGTGTGTGGAGCGTCCTTCGTGTACCCTGAACACTACAAGAAACACATCCGTATACACAGCGGAGATAGGCCCTACATTTGTGAGATCTGCGGCAAGTCGTTCAACTCGCCGGACAACCGCAACACGCACCGCTTCGTGCACAGCGACAAGAAGCCCTACGAGTGCGTCACGTGCGGCGCCGGCTACATGCGCAAGCAGCTGCTCTACGCGCACATGAACTCCAGCGGTCATCTAGCAGAGTCGATAGTAGTGAATCAACCCAGAGTTATCAAAGTTACCgaaaatGCGCCGACTGTACCGGTGGAGCACGAAAGAATAGAGTTGCAAGCGGTTAATAAATTTGATACCATATTTGAAACGGGAGAACTAGATACTAGTATGAAATCAGTCACTCTTGcAGACAAAGCAACCCTGAGTCTTCTACAAGAGAGTGGAGACCCCACACTGTTGACTATacATAATCTCGGCGAGAGGACTCAGAGTACCCTCATGGAAGCAGTCAGCAGTGAACAGCTGAGTGATCAGACTGAAATCGTGGCAAACGATGAAAATGGCGGTGTTGTCCGACTTATACAGGTGAAGCTGCCCGACGGGAACAACGGATGGGTGGCGCTTAACCGCTGA
Protein Sequence
MAGQCCLICNSRIVSTVRNSYNIFDELTISFVGKDDAPIPTSLQSRKKLSEVVSDILGLPVEENKVHSNTLCKKCYKSCMEYDMIHTRLTNLKTEILDQFKDSLTYHSIDYENYKKSLAEKNTSPPIVKKESAVLGKKLVLPASKLQPIPPDLLLKVGKFPGSFKGNIVLPQFKTANASTLNLKVTVGTSVLTQTIKTTTTTSASSKQASNLLSSFTNSIKDEIETLTTSQSHTSPKTSILNFNVNSLPKDFLSEAVLTKMGDEENGDGKSDEEVQENEGDQSMEIDEDCSLSLIPVSTADSKSLVLEVEGMKSNSKDTEETEWNIEELQSLDSTNEEHKYILGKLQILNEGDDEIDEDEEAHTIVVDSENGSILRMVSGQKFMYEGGEISLVMTDDDQQQDESNGLNDEQGDDSNEETAIELQMAGDEETANAILAAAQEQGGAFIKVESGEMFRVQPAARPRLVARRGDGFQCLLCHQNDDGDKPRVTGDAESMMRHLKRFHDARIYICPFCSAIMRKKVDYTAHIAEHATKLKGGRASHMCAACGKTFGSRALLLEHANVHAGLRPHRCELCHKAFASKYTYQAHVKTHAVRMRVPHVRRVRQDVRQPRAAAGARQRARGAAPAPLRAVPQGLRVQVHLPGARQDACGTYARPTCAPRAARRSAAARCCWSTPTCTRGCARTAASCATRPSRPSTPTRRTSRRMRYVCASHMCAACGKTFGSRALLLEHANVHAGLRPHRCELCHKAFASKYTYQAHVKTHAVRMRVPHVRRVRQDVRQPRAAAGARQRARGAAPAPLRAVPQGLRVQNRPRPYKCSQCTKTFLTQQHLNQHEKTHSGIKDFVCNVCNKAFSTQHNLEVHGVVHSGNKAFSCSECSKAFARRAELRDHMRTHTGERPYPCDICGARFTQRSNLHSHKRATHLDDKRHHCTLCPKRFKRRRYHSHIIYIHLRRALHAALQPALAQARHAPRRQAAPLHALPQALQAEEVPLTYHIHTSAARASRSAPTCTRTSAPRTSTTSGTTARSAPSASSGGGTTHISYTYICGARFTQRSNLHSHKRATHLDDKRHHCTLCPKRFKRRRYHSHIIYIHLRRALHAALQPALAQARHAPRRQAAPLHALPQALQAEEVPLTYHIHTSAARASRSAPTCTRTSAPRTSTTSGTTARSAPSASSGGGTTHISYTYICGARFTQRSNLHSHKRATHLDDKRHHCTLCPKRFKRRRYHSHIIYIHLRRALHAALQPALAQARHAPRRQAAPLHALPQALQAEEVPLTYHIHTSAARASRSAPTCTRTSAPRTSTTSGTTARSAPSASSGGGTTHISYTYICGARFTQRSNLHSHKRATHLDDKRHHCTLCPKRFKRRRYHSHIIYIHLRRALHAALQPALAQARHAPRRQAAPLHALPQALQAEEVPLTYHIHTSAARASRSAPTCTRTSAPRTSTTSGTTARSAPSASSGGGTTHISYTYICGARFTQRSNLHSHKRATHLDDKRHHCTLCPKRFKRRRLLEYHIKASHTGERPLKCEVCGASFVYPEHYKKHIRIHSGDRPYICEICGKSFNSPDNRNTHRFVHSDKKPYECVTCGAGYMRKQLLYAHMNSSGHLAESIVVNQPRVIKVTENAPTVPVEHERIELQAVNKFDTIFETGELDTSMKSVTLADKATLSLLQESGDPTLLTIHNLGERTQSTLMEAVSSEQLSDQTEIVANDENGGVVRLIQVKLPDGNNGWVALNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-