Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759253.1:19028563-19035753[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 39 0.011 1.4 11.0 0.1 2 23 11 33 10 33 0.94

2 39 0.0064 0.82 11.7 0.6 2 23 54 76 53 76 0.96

3 39 0.00052 0.068 15.1 2.6 2 23 82 104 81 104 0.95

4 39 0.031 4 9.5 0.6 1 23 109 132 109 132 0.96

5 39 0.39 50 6.0 0.4 2 23 135 157 134 157 0.95

6 39 0.11 15 7.7 2.1 2 21 164 183 163 184 0.93

7 39 0.0028 0.36 12.8 0.4 1 23 244 267 244 267 0.93

8 39 2.5 3.2e+02 3.5 0.0 3 23 296 317 294 317 0.90

9 39 0.099 13 7.9 0.2 3 23 341 363 340 363 0.95

10 39 0.0012 0.16 13.9 0.6 3 20 370 387 368 391 0.90

11 39 0.019 2.5 10.2 0.3 1 23 396 419 396 419 0.97

12 39 0.00032 0.042 15.7 0.4 2 23 425 447 425 447 0.94

13 39 0.0003 0.038 15.9 4.7 1 23 451 474 451 474 0.97

14 39 0.00039 0.051 15.5 0.6 2 23 481 502 480 502 0.96

15 39 0.16 21 7.2 3.0 1 23 550 572 550 572 0.95

16 39 0.018 2.3 10.3 0.1 2 23 600 622 599 622 0.95

17 39 0.11 14 7.8 1.6 2 23 643 665 642 665 0.96

18 39 0.003 0.39 12.7 3.7 1 23 670 693 670 693 0.97

19 39 0.29 38 6.4 2.3 1 23 697 720 697 720 0.86

20 39 0.044 5.6 9.0 0.2 2 23 723 745 722 745 0.96

21 39 2.6 3.3e+02 3.4 0.1 2 20 751 769 750 771 0.92

22 39 0.0013 0.16 13.9 3.8 1 23 820 843 820 843 0.96

23 39 0.33 42 6.3 0.1 2 23 872 894 871 894 0.95

24 39 0.0064 0.82 11.7 0.0 1 21 916 936 916 937 0.94

25 39 0.004 0.52 12.3 3.3 1 23 972 994 972 994 0.96

26 39 0.015 1.9 10.5 0.0 2 23 1022 1044 1021 1044 0.91

27 39 0.0071 0.92 11.5 1.9 1 23 1064 1087 1064 1087 0.96

28 39 0.00022 0.028 16.3 0.3 1 23 1092 1115 1092 1115 0.96

29 39 0.0011 0.14 14.1 1.1 1 23 1120 1143 1120 1143 0.96

30 39 0.0015 0.2 13.6 0.6 2 23 1146 1168 1146 1168 0.95

31 39 0.026 3.3 9.7 1.2 2 21 1176 1195 1175 1196 0.94

32 39 2.7e-05 0.0035 19.1 3.0 1 23 1248 1271 1248 1271 0.98

33 39 4.1 5.3e+02 2.8 0.0 2 23 1344 1367 1343 1367 0.88

34 39 2.8e-05 0.0037 19.1 0.2 3 23 1374 1395 1373 1395 0.94

35 39 0.0052 0.68 11.9 2.8 2 23 1400 1422 1399 1422 0.94

36 39 0.0011 0.14 14.1 5.5 1 23 1427 1450 1427 1450 0.96

37 39 6e-05 0.0077 18.0 4.8 1 23 1454 1477 1454 1477 0.97

38 39 0.00041 0.053 15.4 0.3 2 23 1484 1505 1483 1505 0.96

39 39 1.1e-05 0.0014 20.4 0.3 1 23 1511 1533 1511 1533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	39	0.011	1.4	11.0	0.1	2	23	11	33	10	33	0.94
2	39	0.0064	0.82	11.7	0.6	2	23	54	76	53	76	0.96
3	39	0.00052	0.068	15.1	2.6	2	23	82	104	81	104	0.95
4	39	0.031	4	9.5	0.6	1	23	109	132	109	132	0.96
5	39	0.39	50	6.0	0.4	2	23	135	157	134	157	0.95
6	39	0.11	15	7.7	2.1	2	21	164	183	163	184	0.93
7	39	0.0028	0.36	12.8	0.4	1	23	244	267	244	267	0.93
8	39	2.5	3.2e+02	3.5	0.0	3	23	296	317	294	317	0.90
9	39	0.099	13	7.9	0.2	3	23	341	363	340	363	0.95
10	39	0.0012	0.16	13.9	0.6	3	20	370	387	368	391	0.90
11	39	0.019	2.5	10.2	0.3	1	23	396	419	396	419	0.97
12	39	0.00032	0.042	15.7	0.4	2	23	425	447	425	447	0.94
13	39	0.0003	0.038	15.9	4.7	1	23	451	474	451	474	0.97
14	39	0.00039	0.051	15.5	0.6	2	23	481	502	480	502	0.96
15	39	0.16	21	7.2	3.0	1	23	550	572	550	572	0.95
16	39	0.018	2.3	10.3	0.1	2	23	600	622	599	622	0.95
17	39	0.11	14	7.8	1.6	2	23	643	665	642	665	0.96
18	39	0.003	0.39	12.7	3.7	1	23	670	693	670	693	0.97
19	39	0.29	38	6.4	2.3	1	23	697	720	697	720	0.86
20	39	0.044	5.6	9.0	0.2	2	23	723	745	722	745	0.96
21	39	2.6	3.3e+02	3.4	0.1	2	20	751	769	750	771	0.92
22	39	0.0013	0.16	13.9	3.8	1	23	820	843	820	843	0.96
23	39	0.33	42	6.3	0.1	2	23	872	894	871	894	0.95
24	39	0.0064	0.82	11.7	0.0	1	21	916	936	916	937	0.94
25	39	0.004	0.52	12.3	3.3	1	23	972	994	972	994	0.96
26	39	0.015	1.9	10.5	0.0	2	23	1022	1044	1021	1044	0.91
27	39	0.0071	0.92	11.5	1.9	1	23	1064	1087	1064	1087	0.96
28	39	0.00022	0.028	16.3	0.3	1	23	1092	1115	1092	1115	0.96
29	39	0.0011	0.14	14.1	1.1	1	23	1120	1143	1120	1143	0.96
30	39	0.0015	0.2	13.6	0.6	2	23	1146	1168	1146	1168	0.95
31	39	0.026	3.3	9.7	1.2	2	21	1176	1195	1175	1196	0.94
32	39	2.7e-05	0.0035	19.1	3.0	1	23	1248	1271	1248	1271	0.98
33	39	4.1	5.3e+02	2.8	0.0	2	23	1344	1367	1343	1367	0.88
34	39	2.8e-05	0.0037	19.1	0.2	3	23	1374	1395	1373	1395	0.94
35	39	0.0052	0.68	11.9	2.8	2	23	1400	1422	1399	1422	0.94
36	39	0.0011	0.14	14.1	5.5	1	23	1427	1450	1427	1450	0.96
37	39	6e-05	0.0077	18.0	4.8	1	23	1454	1477	1454	1477	0.97
38	39	0.00041	0.053	15.4	0.3	2	23	1484	1505	1483	1505	0.96
39	39	1.1e-05	0.0014	20.4	0.3	1	23	1511	1533	1511	1533	0.98

Sequence Information

Coding Sequence: ATGGAGATAAAAATTGATGTATCAGAAATTTCTTGTGAGATTTGCTCTGAAACATTTTCATCTTTCGATGAAGTCATCAACCATTTGTACGTTAAACATAATCTCGAATACGACAAGTCAGTAGAAATGGCCATTGAGGAGTACCGACTAGTTGACCTCAATTGTACAGTTTGCAAGGAAAAGTTTTCATATTTCGGGTATTTAGTTTCGCACGTCAATACAAATCATCCGAAAAACTGTCTAGTGTGTGATAAGTGTAAccaaaaatttaacaaaaagcGGGATTTATTCTCTCACATGAAAAATTATCACAGAGAAGGGGGATACCAATGTGAAATGTGTCCACTAATTTTCAATTCTCTAAATATATTAAGAAAACATAGAAATAACAGGCACTTGACTAGGTGCAATATATGTCATCTTAAACTACCCTCTGCTGCTTTAAAACAGAAGCATATTGAAATAGAACATCCGGACGATGGCTCCCTTCAATGTGACAATTGTTTCAAAGAGTTTCATACAAAACAAGGTCTTAGGATGCACAACAGAAAGTGCAAAGGGGATGACATCTTCgaattttcaattaaaaaagaagaatatatTGCTATGGATTTAGACCAAAACTACGAGGACCAAGTCAAAAGACCTAGCGTCAAACAAATCCGCGAGAACATAGTCATTGTCATCAATATGTCTACTGCTATACCttttaacttttataaaaataaatttaactgcTTTTATTGTTCAAAAGACTTTGCAGATTCTGATTCGATGAGGGCACACACTATTTTAGAACATCCTGTGTGCGATGTTAAACAAAAGTGTATTCGAAAATGTAGGGAATCTGTTGCTTGTGTCAAAATTGACGTTTCTTCTCTAGCTTGTAAGGTATGCTTTGAATCAATGAGTGATTTGGAAGACCTCCTTGATCACTTGATAGCTAAACATGACGTGAATTATGACAAGTCTATAACAACGTGTTTACAGCCTTACAGACTTATAAAAGACCAAATGGCATGTCCAAATTGTCCAGGAGAAGTTTTCCGATTTTTCGGTACACTGCTAAAACACATGAATAAAAAACACACAAACAATAACATAATTTGTGTGTACTGTGGCCAAACTTTTCGCCGGGACCAAAATCTACGCGTGCATATATGGCGACACCATCGGGATGGCagattcaaatgtaatatatgCGGTGCCGAGTGCAATATTCCATCCAGACTGTACATGCATATGGCTAGAGCTCACGGTGTCAAAGCGGCAAAATGTCCAAAATGCCCCGAGAGTTTTTCTACTCAATACTTGAGACAGAAGCATTTGATAGAAGCTCACGATTGTGGACACAAGTGTTCGTACTGCGGGAAGCTCTTCACACGGAATTCTTTCATGAGAGATCACGTAAGGAGAACACATCTCAAGGAGAAAAACGTCGAATGCTCCATCTGTAATATGAAGTTTTTCAACAATATTCTTCTCAGGAGGCATATGGTGAAACATAGCGGTGAAAAGAATTTTCATTGCGATATCTGCGATTCGGAAACAGAGTCATCAAAGACAAGTGCTAATTCTCTCAGGAGGAGGAACCTGCTTATTCTATTCAACAACACTACATTGGTACCGTTTAAATGGCGAGGCAAATACCTGTGCTTCTATTGCGGAATTGACGTTGAGAGTCATAAACATCTCCGTAATCACACAGAGAGCCACGGGCTCTGCTCTGACAGAGATCGAGCTATAAGACTCGTGAAATCGGCAGATTGTGAAACTAAAATCGACGTTTCTCATATAACTTGCAAACTATGCACCCAATCTTTCATACGTCTGGACGATATCGTCAACCATTTAATATCTGCACACGATTTGCCTTACAGTAAACAAGCAAGTTTGATGCTAACATCATATAGACTTGTAGATTTACAATGCCTGCTTTGTGACCAATATTTTGACTATTTCCCGAAACTGGTGTCCCACATGAACACTTGCCACCCTAACGACAGTTTCTCTTGTGCTGAATGCGAGCACACGTTCAACAAAAAGCGTGATTTAAACAGTCATACCAGAAACTATCATCGGAAGGAGTACAAATGTAGCAAATGCAGCGAAGTTTTCGCTTCCAATGTATCGATGAGATTCCATAGGCTACATTCGCACCCATCCACCTGTAATATATGCTACGAAATATTTTCGTCGGATGTCGAACGACTCAAGCATATGAAAATTGAACACACGGCTGACCAAGTCCAGTGCGGATTCTGTCAACAAGTTTTATCCACAAAACAAGCGGTTTTGCGACATGCGTCTAAATGTACCGCAAAGAGAGACCCTACTATTGAAACTATCATAATAGGGGATGAAGATAAGAAAATAGCAACAAAAGATCTCAGAAATAGTATTGCGGCCATCGTTAATATGTCTACTGCGATACCGTTTAAATTCTTCATGAGCAAATTCAGGTGTTTCTATTGCTCGAAAGACTTTTCGACTTGTGATAGTTTGAAAGAACACACAATCATCCAACATCCTCAATGCGATGTAGCTGATAAATGTATGAAACTCCGCAACAGATACGACGgaaacaaaatcaaaattgatACGGCCTCTCTATCTTGCAAGCTGTGCTACGAATCTTTACCCGATTTGAATACTTTGATTGACCATTTAACGACCGAACATAAAGTCCAATGTAATAAGTCTGTTGAAAACTACTTGCAGTCTTTTAAACTCATTCGAAATAACTATCCATGTCCATTGTGCGATGAGGTTTACAGATATTTCGGATTGCTTCTCAAACACGTTAATGTATTGCCAGGCCCGTACGGAGGCTGTACCTCTGAAAGGAGACGGAAAAATCTGAAAATACTTTTTGACCACACCTCCATAATGCCTTTCAAATGGCGGGGCAAATACCTCTGCTTCTATTGCGGCAAGAACTACACCGAATACACAGAGTTCAAAAAACACACGAAATCTCACGGCTTATGTAACACTCAAGATTACTCCCTAAAGTTAATAAAAGGgaacaatattgaaattaaaatcgaTGTATCGGAAATCGTTTGTGATATCTGTAACGAAACTTTTAGTAGATTTGAAGAGATTATCGATCATTTAATCGGTAAACATCAGTTAGAATACAACAAAAATGTCGATGTACCGTTTCAGGAGTATCGATTAGTTGATTTTAGATGCCTTCATTGCGAAGAGAGTTTCTCTTACTTTGGATATTTAGTAACGCATGTCAATAACATGCATCCGCAAAATTGCTTCATTTGCGATGACTGTGGTGgtcgttttaataaaaaaagggaTTTGGCTATTCATATAAGGAATTATCACCGTGTGGGAGGATATCCTTGTgacttgtgcttacagagtttcGATACTTATCAATCACTACGAAGGCATCAAAATAATACGCATTTCAGGCAATGTAAAAGCTGCGGTTCTAAATTTGCGTCTTTATctcttttacaaaaacatttaaaagCAGAACATCCTTATGATGAAAGTAATATGAAGTGTCGTTACTGTTCAAAAGAATTCCATTCATCCATTGGCCTAAGACAGCATATAAGTAAATGTAAAGTGAAAATGATTTCACAAGCCGAACCAGAATCTTTCTTAGAAGACAATTTAGAACCACGAaagaaacaaaacattctaCAAATTCGTCAAAATATACAATGTGTTTTAAATATGTCGACAGCAGTCCCTTTCAAATTCTTTTCGAAGTATTCCTGCTTTTACTGCTCGAAGAAGTTCTCTGATTTCGACGACTTACGACAGCATACAAGAACTGAACATCCTATATGCGATTTGAAACAGAAATGTATGAAAAAGTGCAAAGGCGAAAGAATTAATGTTAAGATTGATATTTCAGTATTAGCCTGTAAAGTCTGCTGTCTTCCAATGCAAGATTTAGAAACTTTAATCACCCATTTAGTAGAAGTACACAAAGCGAATTATGACAAATCTATTATTGGATGTCTTGAGCCCTTTAGAATTATCAAAGATAATATACCCTGTCCTATATGCCCAGATAAGGTGTTCCGTTACTTCGGGATCTTATTACGTCATGTTAATGCAGAGCATAGCAATAATAACAGAATTTGTGACTTCTGCGGTCGAAGTTTTCGAAACGCAGCTAACTTAAACGTACATATAACGTATTCTCATACTGGCTCCTGTGAATGCGATGTCTGTGGTATCAAATATAAGAACCAATGGTGCTTAGCTCGACATAGGGCTAAATCCCATAACGCGAAAGACCACAAATGTCCGAAATGTCCAGAGACTTTTAATTCACAGTATCATAAACAAAAGCATTTAATTAAAACCCATAATATTGGACATAAGTGTGATTATTGTGACAAAATGTTCACAAGAAATTCTTTCATGAAGGATCACGTTAGACGAACTCATTTGAAGGAGAAAAATGTCCCTTGTTCTATTTGCAACGAGAAATTCTTTGATAACTACCTTTTAAGGATGCATATGGTGAAGCATGAAGGTGATAGGAAGTTTAGCTGTACTGTCTGTGGCAAAGCATTCTTGAGGCGAAGTAATTTAGCTTCGCACATGGAAATGCATAAGAAGTATGGTCATGTTCAGTTGCAAATTTAA
Protein Sequence: MEIKIDVSEISCEICSETFSSFDEVINHLYVKHNLEYDKSVEMAIEEYRLVDLNCTVCKEKFSYFGYLVSHVNTNHPKNCLVCDKCNQKFNKKRDLFSHMKNYHREGGYQCEMCPLIFNSLNILRKHRNNRHLTRCNICHLKLPSAALKQKHIEIEHPDDGSLQCDNCFKEFHTKQGLRMHNRKCKGDDIFEFSIKKEEYIAMDLDQNYEDQVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDSMRAHTILEHPVCDVKQKCIRKCRESVACVKIDVSSLACKVCFESMSDLEDLLDHLIAKHDVNYDKSITTCLQPYRLIKDQMACPNCPGEVFRFFGTLLKHMNKKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMARAHGVKAAKCPKCPESFSTQYLRQKHLIEAHDCGHKCSYCGKLFTRNSFMRDHVRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICDSETESSKTSANSLRRRNLLILFNNTTLVPFKWRGKYLCFYCGIDVESHKHLRNHTESHGLCSDRDRAIRLVKSADCETKIDVSHITCKLCTQSFIRLDDIVNHLISAHDLPYSKQASLMLTSYRLVDLQCLLCDQYFDYFPKLVSHMNTCHPNDSFSCAECEHTFNKKRDLNSHTRNYHRKEYKCSKCSEVFASNVSMRFHRLHSHPSTCNICYEIFSSDVERLKHMKIEHTADQVQCGFCQQVLSTKQAVLRHASKCTAKRDPTIETIIIGDEDKKIATKDLRNSIAAIVNMSTAIPFKFFMSKFRCFYCSKDFSTCDSLKEHTIIQHPQCDVADKCMKLRNRYDGNKIKIDTASLSCKLCYESLPDLNTLIDHLTTEHKVQCNKSVENYLQSFKLIRNNYPCPLCDEVYRYFGLLLKHVNVLPGPYGGCTSERRRKNLKILFDHTSIMPFKWRGKYLCFYCGKNYTEYTEFKKHTKSHGLCNTQDYSLKLIKGNNIEIKIDVSEIVCDICNETFSRFEEIIDHLIGKHQLEYNKNVDVPFQEYRLVDFRCLHCEESFSYFGYLVTHVNNMHPQNCFICDDCGGRFNKKRDLAIHIRNYHRVGGYPCDLCLQSFDTYQSLRRHQNNTHFRQCKSCGSKFASLSLLQKHLKAEHPYDESNMKCRYCSKEFHSSIGLRQHISKCKVKMISQAEPESFLEDNLEPRKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFSDFDDLRQHTRTEHPICDLKQKCMKKCKGERINVKIDISVLACKVCCLPMQDLETLITHLVEVHKANYDKSIIGCLEPFRIIKDNIPCPICPDKVFRYFGILLRHVNAEHSNNNRICDFCGRSFRNAANLNVHITYSHTGSCECDVCGIKYKNQWCLARHRAKSHNAKDHKCPKCPETFNSQYHKQKHLIKTHNIGHKCDYCDKMFTRNSFMKDHVRRTHLKEKNVPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLASHMEMHKKYGHVQLQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -