Egri008295.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759231.1:29793354-29794155[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-08 1.7e-05 25.9 0.0 2 41 16 54 15 57 0.93 2 2 5.8 1.4e+03 0.5 0.0 14 26 124 135 118 135 0.82
Sequence Information
- Coding Sequence
- ATGGTGCGAAATCGTAAAAGGAAGACGGATTATGGTCTCCATAGTGAAAAAGATATGGCAGAAGCGATTTTGATGGTTGAAAGAGGTGTTAGTCTACGAAAAGCTGCAAATGAAAAGCATGTTAATTTTATGACATTACAAAGACATGTTCAAAAGAAGATAAAATGCTCGGAGCACGAAGCTTCAAAAGAAGAAGTTGTGATTGCTCAAAACGCTGGAGTGGGTTCCAATTCAGCCCGAACAGAACAGCTGCAGGAACATACAAATACCATTCTGGTGGTAATTTGCACGATTTTGGCGATTGGCatacttattattttgtacaagCTGTATAACCATTGCCATAAGAAGAAAATACAACGGCATATAAATGAAATGTCCTTAAGGCGTTACGCCAGCATTTTTCGGAGACACCAGGCACTGGAAGCTGGTCTACCAGAAGCTGCGAAGGTCGAGGTCATAGGCGGTTAA
- Protein Sequence
- MVRNRKRKTDYGLHSEKDMAEAILMVERGVSLRKAANEKHVNFMTLQRHVQKKIKCSEHEASKEEVVIAQNAGVGSNSARTEQLQEHTNTILVVICTILAIGILIILYKLYNHCHKKKIQRHINEMSLRRYASIFRRHQALEAGLPEAAKVEVIGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -