Egri043350.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema griseolum
Gene Symbol
-
Assembly
GCA_963662185.1
Location
OY759257.1:9680862-9693211[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-11 1.5e-08 35.6 0.0 4 37 855 888 853 890 0.95

Sequence Information

Coding Sequence
ATGTCGGATTCCACGGCGAAACGATCTAGAAAATCGAAGTTGGTGCCTCGGAAATACGTAGATATTGATGATGAAAACATTGAAGTCTTACAGGATCAACCGAGTActtcaaaaagaaaaaggagtaaaaaaaaaattaaaaatgtctcTGAATTATCAGAAACAAGTCAGGCAAATGATGACTTTGAAGCCCTCATTGATTCTCAAAATACAGGAGCAGTAGTTCCTACATCACCTTTAAAGTTCTCTGTAACGGTAGCAGTAGAAGAATTTGACGAAAGCAGTACTGAGTTAATGATCATAGAACCAGAAGATAATACCATCGAGATCCTCTCTGATTCTGATGATAATGAAGCTGCTCCTACGAAAACAAGTATGGTGAGTGAAAATGAAACGGTATGTACAAAAGATGGACTAGATATATTAATACTAACCAGAGAAGATATACTGAATGAAACTAACAAAATCCTAGAAAAATCTACGGACATTGCTAACAAAATTCTAGCGATAGAAGTCAAAAATGGTATTGGACAATACCAAGTAACACAAAATGATCAAGAAAATAAGTTTACTAAAGTATTCGATCAGTGGCAAGCGTGGCAAAAGTTGATATACCAAGTAAAGTATAGAAGTTCACCGTTATTCTACAAGTGTTACATATGTGAACTATCTTGGTGGTATCTTCACGATTTCCAAGAACATTTGAAATGTCATGATGATTATAACCTAGACCTTGAAGAGTATACCCTCTACGAAGCTAATGTTATAGCATATCGATACGTTGacgatattataaatataaaacactttAATACTGAAGGAGATTGCCCGAAATGTGGCAACGAGTTTGCTATACATAAATCAACCAATCGTTCAAAAAATACAATGTACAGTTGTAAAGTTAGATCGTGCTATAAGTTATTCAGCACTTGCTTTGCTCTTAGAAGTCATGAATACATATTTCACACTATATCCGAGCTGACCGGTGTAGCGTTTCAACTAGGAAGACAAAGCAAAAATTGTGAGGTCTGCGGATTTGTTTTTCACTCTCAAGAATCGTACCAAGCACATATGGATTTAATGCACAGAGTACGTTCAGATGTAATCGTTCCTGCTAAGTATCGGAAATGTGTTCGTTGCATAGCGACCTATGGTTGGGACCATGTTTGTAAAAATAGTATTAAGAAAGTACATAACCCAGTACAGTGCAAGTATTGCTTTAGAAGTTTCCTACTAGCGCAGGCATTTCGGAATCATATGAACCGAGTCGGTCGACATCGGTGTAGAGTGTGTAACATTAGGTTAATAAGGCAATGTCTAGAAGTTGAACATTTTCTGAAGCATTCAGACAATTTTAAGATTGTGAAGAAGTGCGCGGTGTGCGAAGAATTTACTGTTTTCTTGAGCGATGCGGGGGCATTGAGGCATATTTCCGAGCATTACCACTGCACTGAAGAGACTTTCACAAAGTATTGCTGCAATATGTTACTACCAAAATCATGTTTGATTAAAAAAGCCGAAAGTGTTAAAGTGGAAGCCGAGCAAAGTGTGATCGTTGAAGtGGAATCAAAAGAAACAATCCCAGTCCTAGAGTTTGAAATCAAATGTGAAGCAGAAGAAACCACTGAAAATCAGAGTGACGAAGAATTTGAAAATCAACTACAAATCAAAGAAGAGATTGATATAGAAGACAATTTCGATGCCCAATTTATGAACAAAGAATATTCTAAGAAGCAAGAAGAAGACGCTGAAATGCATGCAAGAATATTCGGCGTGAAAATCGAACCAAACGATGTGGAAGTGAAGCAAGAAATAGACGAAGAAGAATATGAGGACGATATAATTAAACTAGATTATAATTTTCTAGAGAATATGCAAGCTATGGACAGTACCACCGCTTATGTAGAAGGTACTGAAGTTGAATTGCAAGAAACGAACGAAAGTACGCAAGACATGGAATATACACTGGAAATTAACGTGGAAAGTGGAGATGATTCAGAAGAGATAAAGAAGACTGAGAAACTGCCAAAAATTTACAGATGCACCCGCTGTGGATTCGATGCTGTGCATAAAGAATATCGGGCTCATCTAAAATCTCATTGCAAAGAAAGGTTATACGAACGAGATAATTACCCGTGTACAAAGTGTTCTGTGACATTTGACAGTTTTGAAAAGTTCATAGATCATTTCTCTGAACATAACCTCAATTCTATGGCTTGCCCGGAGtgttataaaatttatgaaacGTATGAAGCGTTGCAAATTCATCTAGCAACACATATACGGATGACATATGTAGTGGTTCAATCTATGCCAGTTGTAAAGGGTGAAATGAAGTACCATTATCAATGTAAATTATGTCAGAATACGGTTGAAAAGAAGGACTTCTTTGAACATTGGGAACAACACTTAACATTTATTGAGACTACGGAGAAAGTGATTGTAAAGGACGAAGATAATGCAGGGCCTGTTGACAAAGAAATGTTAAACCAGTTGCTAGTCATGCCTCGAAGTCAATTGTCACCAAAGCCGAAGTCGAAAAGAAAGAGTTGGGCCAAGGCTAACATGATTGAGGCTGTAAAAGCAGTAAGAGAAAAGAAAATGGGTCTGAAAAAAGCAGTTAAGCTGTATAGCGTTCCAAAAACTACTTTGCAAAGGTTTGTGCACAGTGACCAGCCTCCCGATGAGGTTGTAAATACTACTATAGGAAGAAGACCTGTCCTGCCAACTCATCTTGAAGAAAGCCTTGTGTCATATCTTCTTGTTATGGAAAGTAAATTTTATGGCTTGACCCGTCAGGATGTTCGTAAGATGGCCTATCAGTTGGctgtgaaaaataatattgaacatCCGTTTCGAAATAACATAGCCGGGCGAGCTTGGCTTGACCATTTCTTATTACGACACAAAGATAAACTATCTATTCGATCACCTACAGGAACTTCCAATGCTCGGGCTCAAGGTTTCAATAAAGAAGCAGTGGATAAGTTCTTTGACCTCCTTGAAGAAGAATTCCTAAAACATAATTATCCTCCGGAGAGAATTTTTAATGTCGACGAAACAGGGCTTTCTGTCGTACAAAGCAAAATGGTTAAAGTAATTGGTCTGCGAGGGaaaagacaagtaggtagcataacTGCGGCTGAGCGTGGATCATTGGTGACAGTAGTATCAGCGATGAGCGCAAGTGGCATATTTATTCCACCGCTGTTAATATTTCCACGCAAAAACATGACACAAACGTTGATGAAAGGAGCTCCACCAGGTTCTATAGGAAGATGTCATCCGTCAGGGTGGATTCAGTCAAACCTGTTTACTGACTGGTTTCATCATTTCGTTGAAAAGACCCACCCGACTGAAGCATCGcctgttttattaattcttgATGGTCATTATTCACATACACGCAATTTAGATGTTTTGATGGCAGCTAGAGCTAACAACGTCACAATTATTAGTTTACCGCCACATTCAACACACAAAATGCAACCTCTCGACAGGTCTTTTATGGGTCCTTTGAAAACATACTACAGTGAAGAAATTAGACAGTGGTTACTCAATTCCAACCAGACGTTGACTCCATACGAAATATCTGAATTGCTGGGACGTGCTTATCTCAAGTGCCAAACAGGAGCTATTGCTGTAAATGGGTTCAGAGTAACTGGCATTTACCCAATTAACAGACACGTTTTCACAGAAGTAGACTACCTAGCAAGCTGTGAGACCACTCTTCAATCTCAAACTACTGATAATGACCCGCATCTACCGTCTACCAGTACGCATATTGCTGTTCAAATGCCACAGCCAGAACCTCAACCAGGCCCTAGTGGACAGGCAAACCAGTCTTCTCCGCAAATCATTGACAGGAATTCTATTATTCTTCCTGAACACATCGTACCGGTGCCGACACCAAAGAATAAAAGGTCCAACAGAGGCCGTAAGTCATCTGCCGCTACTTTATTAACCGGATCCCCTTACAAACAGCAACTTGAGGAGTCAATCAAGTCTATAGCGCAGAGAGGAAATAGTCGGGGAAGAGCTCGGGGAAGAGCTCGTGGGCGTAGAGGTGGACTGTCTTCTAGAACCCTTACAAACAGCCAGGATTCTTCCTCTTCGGATTCTGAGTCTTCTGTTATATCAGGTGACACGGTCATGTCGGAAAATGATACCGCGCATATCCAGCCTACAAACCAAGATGACGCTTGTTGCATTTTTTGCTCGGAAAATTACTCCAATGATCAGCAGGGTGAAACTTGGATTCAGTGCCAATCGTGTAGGTTGTGGGCACACATTGAATGTTCAGGATGCGACGCGGAGTATTATATATgtgatttttgtaattaa
Protein Sequence
MSDSTAKRSRKSKLVPRKYVDIDDENIEVLQDQPSTSKRKRSKKKIKNVSELSETSQANDDFEALIDSQNTGAVVPTSPLKFSVTVAVEEFDESSTELMIIEPEDNTIEILSDSDDNEAAPTKTSMVSENETVCTKDGLDILILTREDILNETNKILEKSTDIANKILAIEVKNGIGQYQVTQNDQENKFTKVFDQWQAWQKLIYQVKYRSSPLFYKCYICELSWWYLHDFQEHLKCHDDYNLDLEEYTLYEANVIAYRYVDDIINIKHFNTEGDCPKCGNEFAIHKSTNRSKNTMYSCKVRSCYKLFSTCFALRSHEYIFHTISELTGVAFQLGRQSKNCEVCGFVFHSQESYQAHMDLMHRVRSDVIVPAKYRKCVRCIATYGWDHVCKNSIKKVHNPVQCKYCFRSFLLAQAFRNHMNRVGRHRCRVCNIRLIRQCLEVEHFLKHSDNFKIVKKCAVCEEFTVFLSDAGALRHISEHYHCTEETFTKYCCNMLLPKSCLIKKAESVKVEAEQSVIVEVESKETIPVLEFEIKCEAEETTENQSDEEFENQLQIKEEIDIEDNFDAQFMNKEYSKKQEEDAEMHARIFGVKIEPNDVEVKQEIDEEEYEDDIIKLDYNFLENMQAMDSTTAYVEGTEVELQETNESTQDMEYTLEINVESGDDSEEIKKTEKLPKIYRCTRCGFDAVHKEYRAHLKSHCKERLYERDNYPCTKCSVTFDSFEKFIDHFSEHNLNSMACPECYKIYETYEALQIHLATHIRMTYVVVQSMPVVKGEMKYHYQCKLCQNTVEKKDFFEHWEQHLTFIETTEKVIVKDEDNAGPVDKEMLNQLLVMPRSQLSPKPKSKRKSWAKANMIEAVKAVREKKMGLKKAVKLYSVPKTTLQRFVHSDQPPDEVVNTTIGRRPVLPTHLEESLVSYLLVMESKFYGLTRQDVRKMAYQLAVKNNIEHPFRNNIAGRAWLDHFLLRHKDKLSIRSPTGTSNARAQGFNKEAVDKFFDLLEEEFLKHNYPPERIFNVDETGLSVVQSKMVKVIGLRGKRQVGSITAAERGSLVTVVSAMSASGIFIPPLLIFPRKNMTQTLMKGAPPGSIGRCHPSGWIQSNLFTDWFHHFVEKTHPTEASPVLLILDGHYSHTRNLDVLMAARANNVTIISLPPHSTHKMQPLDRSFMGPLKTYYSEEIRQWLLNSNQTLTPYEISELLGRAYLKCQTGAIAVNGFRVTGIYPINRHVFTEVDYLASCETTLQSQTTDNDPHLPSTSTHIAVQMPQPEPQPGPSGQANQSSPQIIDRNSIILPEHIVPVPTPKNKRSNRGRKSSAATLLTGSPYKQQLEESIKSIAQRGNSRGRARGRARGRRGGLSSRTLTNSQDSSSSDSESSVISGDTVMSENDTAHIQPTNQDDACCIFCSENYSNDQQGETWIQCQSCRLWAHIECSGCDAEYYICDFCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-