Basic Information

Insect: Eilema griseolum
Gene Symbol: clz9
Assembly: GCA_963662185.1
Location: OY759232.1:379764-382292[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.9e-11 1.2e-08 36.0 0.0 1 45 14 58 14 58 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.9e-11	1.2e-08	36.0	0.0	1	45	14	58	14	58	0.95

Sequence Information

Coding Sequence: ATGCCCCGGACTTACATAAGAACAAAAAGTAAAACATATACACCGCAAGATTTAGCTCTAGCTATTGAAAAGGTAAAAAATGGAGAGCTTACACAATATAGTGCAGCGCAGAAGTACAAAATTCCTATGACGACGCTTTATGAACACGTAAAGAAACATAATCATACTTTGAGGCCAAATGCAGGTAGGCCAACTGTTATACCATTAGAACAGGAAAAAAAATTAGCCGAAGCGATCACAATCATGGAAAAATGGGGATTTGGACTATCAAGGCTTGAAATCATGGACATTGTAGCTGATTACGTGCGGCTTAATAATATTCAGACTCCATTCAAAAACAATATCCCTGGCCCAGATTGGTTTATTAATTTCCGCAAGAGACATCGATTGTCTATTAAAAAAGCCCAGCCGGTAGAATTTCTGAGAAAGAAAATGACAGATCCATTCGTTATTGCTAGTTATTTTGATTTACTAGAAAATACACTTACTGATTTAAATCTTTTCGATAAGCCACATTTGATTTGGAATCTAGACGAAACGTCAATGTGCCTGGATCCATCCAGAACAAAAGTAGTTGGACAAACCAACAAATATTGTGCGCGAACTACTTATGGTAGCGGTAAAGAGAATATAACTGTGTTAGCAGGTGTAAGCGCCAGCGGCAAAAAAATGCCGCCGTTGATAGTTTTTAAAGGTAAATTCATGTGGGACCAATGGATGGCTGAACAAGGTGATTATGATTTTGAACTATCTTATGCGGCAAGTACTAAGGGGTGGATGGAAACAGATATCTTTTATAATTATCTAGAGAAAATTTTCATCCCAAACCTTGGAGAAGAAAGACCAGTCCTTGTTATTTATGATGGACATTCAACCCATGTCGATGTGAGAGTTGTAACCCTAGCAAttcaaaataatgttacaattctTAAACTACCGCCACATACGTCACACTTGCTGCAGCCTCTTGATTTAGCAGTTTTTAAGTCGTTCAAAAGTATATGGGACGCCAAACTTGTAGAATGGCAGCGAAGTAATGTAGGTACAAAAATGCCAAAAAAAGTTTTCTCACAAACACTTGCAGAAACGTGGCAACAAACTAAACCAGATATTATCAAAAGCGGCTTTAAAAAGGCTGGGATATATCCTTTTAATGCCCATATAATACCTGTGGACAAATATGACCCAGATGCATACAAAAGGTATCAAAAACATATTGATCATACGCAACCAGAACTTGAAAATCCGAAAACACTAAAACAACTTTGTATTGACCTGTTTAACCGCCAACTTTCAACAAATGATGATTCTCTTCAAAAGTCAAATAATGATAATGTTACCCTTCTATCTCAAATATCAAAATCTAACATCCAGACCTTGAAATTTGTCGCCAAGCAACCAACACAATTACCCACATGCTTACGAAATCCGAATCCCATACTAAATCAAACACAAAATTCagcaaaaatacatataatttcaaataaaatattgaaaaaagcaTCCCAACCACTACTTCCAACTCAACAACAACCCCAAATATCATACTCATTCGAAGATTTGGTACTACGTAAAATACAGCAGGACAAACAAGATACCTCTCCCAGAAAAAAGAAACGTGTGGCTAAAGGCGCTGAAGTTATAACAGCTACAGTGGGTGCAAAAATTTTAGAAGAAACGGATAAAgcaaaaaacacaaaatcaataaaaaaatctactaaaaattatatgaagaaGCCAACAACAGTAAACAAAAAGAATTATCCTAAAAGAAAACGCGAGCCTTCATCTGACAGTACAATCACTAGTGTATCCGATATTATAAGCCTACATAGCGAATCAGATATTTATAACGATGCTGATTTTGAACAACTAATGGATAGCTATGAAGATGATTTTGAAACATGTGAAGAACAAAAGCCActcaaaaaatatgtaaaaactgAAAACCAAAATATGCTCATTAACAAAGATTTAAATAATCCCAATTTCCGTGCTAAGAATAAAGGTGTtggaaaaaaaagtaaaggtaAAGAAAATCAAGAGGATAAAAAGGGAGCAGAAAAacgttttgaaaaatataacaaacaatgCGGTGAtgatgtaattaaaattaaagaaatagacGTGACAAATAGagaagattttataaaaaacggTAATGATGAACAGCTACTGCCTGATCTGGAGAGTAAAGGAATAATATACGAGACACAAGAAAGGAACCCCATTAAAGAAAATTATCAATTAGAAGATACAGTGCTAGTTAGATATTTCATTCGACAAAAATGGAGGTATTATATAGGATTCATTGAAAAGATAATAGCACGCGAAGAAACATACTACTTCATCAACTTCTTAAAAAGCATGAAACGACAGCAACAGTTAACTTTTTTTATGCCCAAACGAAAAGATACTGATGAAGTACCCGAGTCTTTAATCGTAAAGCAGATAAAAGTCCAGAAAAGTGATACTGATAAGGAATATTGCTTATGTTATGATgaagatataatatattttaacgacTGA
Protein Sequence: MPRTYIRTKSKTYTPQDLALAIEKVKNGELTQYSAAQKYKIPMTTLYEHVKKHNHTLRPNAGRPTVIPLEQEKKLAEAITIMEKWGFGLSRLEIMDIVADYVRLNNIQTPFKNNIPGPDWFINFRKRHRLSIKKAQPVEFLRKKMTDPFVIASYFDLLENTLTDLNLFDKPHLIWNLDETSMCLDPSRTKVVGQTNKYCARTTYGSGKENITVLAGVSASGKKMPPLIVFKGKFMWDQWMAEQGDYDFELSYAASTKGWMETDIFYNYLEKIFIPNLGEERPVLVIYDGHSTHVDVRVVTLAIQNNVTILKLPPHTSHLLQPLDLAVFKSFKSIWDAKLVEWQRSNVGTKMPKKVFSQTLAETWQQTKPDIIKSGFKKAGIYPFNAHIIPVDKYDPDAYKRYQKHIDHTQPELENPKTLKQLCIDLFNRQLSTNDDSLQKSNNDNVTLLSQISKSNIQTLKFVAKQPTQLPTCLRNPNPILNQTQNSAKIHIISNKILKKASQPLLPTQQQPQISYSFEDLVLRKIQQDKQDTSPRKKKRVAKGAEVITATVGAKILEETDKAKNTKSIKKSTKNYMKKPTTVNKKNYPKRKREPSSDSTITSVSDIISLHSESDIYNDADFEQLMDSYEDDFETCEEQKPLKKYVKTENQNMLINKDLNNPNFRAKNKGVGKKSKGKENQEDKKGAEKRFEKYNKQCGDDVIKIKEIDVTNREDFIKNGNDEQLLPDLESKGIIYETQERNPIKENYQLEDTVLVRYFIRQKWRYYIGFIEKIIAREETYYFINFLKSMKRQQQLTFFMPKRKDTDEVPESLIVKQIKVQKSDTDKEYCLCYDEDIIYFND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00637506;
90% Identity: iTF_00637506;
80% Identity: iTF_00637463;