Egri009544.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema griseolum
Gene Symbol
clz9
Assembly
GCA_963662185.1
Location
OY759232.1:18284087-18286614[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-11 1.2e-08 36.0 0.0 1 45 14 58 14 58 0.95

Sequence Information

Coding Sequence
ATGCCCCGGACTTACATAAGAACAAAAAGTAAAACATATACACCGCAAGATTTAGCTCTAGCTATTGAAAAGGTAAAAAATGGAGAGCTTACACAATATAGTGCAGCGCAGAAGTACAAAATTCCTATGACGACGCTTTATGAACACGTAAAGAAACATAATCATACTTTGAGGCCAAATGCAGGTAGGCCAACTGTTATACCATTAGAACAGGAAAAAAAATTAGCCGAAGCGATCACAATCATGGAAAAATGGGGATTTGGACTATCAAGGCTTGAAATCATGGACATTGTAGCTGATTACGTGCGGCTTAATAATATTCAGACTCCATTCAAAAACAATATCCCTGGCCCAGATTGGTTTATTAATTTCCGCAAGAGACATCGATTGTCTATTAAAAAAGCCCAGCCGGTAGAATTTCTGAGAAAGAAAATGACAGATCCATTCGTTATTGCTAGTTATTTTGATTTACTAGAAAATACACTTACTGATTTAAATCTTTTCGATAAGCCACATTTGATTTGGAATCTAGACGAAACGTCAATGTGCCTGGATCCATCCAGAACAAAAGTAGTTGGACAAACCAACAAATATTGTGCGCGAACTACTTATGGTAGCGGTAAAGAGAATATAACTGTGTTAGCAGGTGTAAGCGCCAGCGGCAAAAAAATGCCGCCGTTGATAGTTTTTAAAGGTAAATTCATGTGGGACCAATGGATGGCTGAACAAGGTGATTATGATTTTGAACTATCTTATGCGGCAAGTACTAAGGGGTGGATGGAAACAGATATCTTTTATAATTATCTAGAGAAAATTTTCATCCCAAACCTTGGAGAAGAAAGACCAGTCCTTGTTATTTATGATGGACATTCAACCCATGTCGATGTGAGAGTTGTAATCCTAGCAAttcaaaataatgttacaattctTAAACTACCGCCACATACGTCACACTTGCTGCAGCCTCTTGATTTAGCAGTTTTTAAGTCGTTCAAAAGTATATGGGACGCCAAACTTGTAGAATGGCAGCGAAAAACGTGGCAACAAACTAAACCAGATATTATCAAAAGCGGCTTCAAAAAGGCTGGGATATATCCTTTTAATGCCCATATAATACCTGTGGACAAATATGACCCAGATGCATACAAAAGATATCAAAAACATATTGATCATACGCAACCAGAACTTGAAAATACGAAAACACTAAAACAACTTTGTATTGACCTGTTTAACCGCCAACTTTCAACAAATGATGATTCTCTTCAAAAGTCAAATAATGATAATGTTACCCTTCTATCTCAAATATCAAAATCTAACATCCAGACCTTGAAATTTGTCGCCAAGCAACCAACACAATTACCCACATGCTTACGAAATCCGAATCCCATACTAAACCAAACACAAAATTCagcaaaaatacatataatttcaaataaaatattgaaaaaagcaTCCCAACCACTACTTCCAACTCAACAACAACCCCAAATATCATACTCATTCGAAGATTTGGTACTACGTAAAATACAGCAGGACAAACAAGATACCTCTCCCAGAAAAAAGAAACGTGTGGCTAAAGGCGCTGAAGTTATAACAGCTACAGTGGGTGCAAAAATTTTAGAAGAAACGGATAAAgcaaaaaacacaaaatcaataaaaaaatctactaaaaattatatgaagaaGTCAACAACAGTAAACAAAAAGAATTATCCTAAAAGAAAACGCGAGCCTTCATCTGACAGTACAATCACTAGTGTATCCGATATTATAAGCCTACATAGCGAATCAGATATTTATAACGATGCTGATTTTGAACAACTAATGGATAGCTATGAAGATGATTTTGAAACATGTGAAGAACAAAAGCCActcaaaaaatatgtaaaaactgAAAACCAAAATATGCTCACTAACAAAGATTTAAATAATCCCAATTTCCGTGCTAAGAATAAAGGTGTtggaaaaaaaagtaaaggtaAAGAAAATCAAGAGGATAAAAAGGGAGCAGAAAAacgttttgaaaaatatgacaaaCAATGCGGTGAtgatgtaattaaaattaaagaaatagacGTGACAAATAGagaagattttataaaaaacgtTAATGATGAACAGCTACTGCCTGATCTGGAGAGTAAACTAATAATATACGAGACACAAGAAAGGAACCCCATTAAAGAAAATTATCAATTAGAAGATACAGTGCTAGTTAGATATTTCATTCGACAAAAATGGAGGTATTATATAGGATTCATTGAAAAGATAATAGCACGCGAAGAAACATACTACTTCATCAACTTCTTAAAAAGCATGAAACGACAGCAACAGTTAACTTTTTTTATGCCCAAACGAAAAGATACTGATGAAGTACCCGAGTCTTTAATCGTAAAGCAGATAAAAGTCCAGAAAAGTGATACTGATAAGGAATATTGCTTATGTTATGATgaagatataatatattttaacgacTGA
Protein Sequence
MPRTYIRTKSKTYTPQDLALAIEKVKNGELTQYSAAQKYKIPMTTLYEHVKKHNHTLRPNAGRPTVIPLEQEKKLAEAITIMEKWGFGLSRLEIMDIVADYVRLNNIQTPFKNNIPGPDWFINFRKRHRLSIKKAQPVEFLRKKMTDPFVIASYFDLLENTLTDLNLFDKPHLIWNLDETSMCLDPSRTKVVGQTNKYCARTTYGSGKENITVLAGVSASGKKMPPLIVFKGKFMWDQWMAEQGDYDFELSYAASTKGWMETDIFYNYLEKIFIPNLGEERPVLVIYDGHSTHVDVRVVILAIQNNVTILKLPPHTSHLLQPLDLAVFKSFKSIWDAKLVEWQRKTWQQTKPDIIKSGFKKAGIYPFNAHIIPVDKYDPDAYKRYQKHIDHTQPELENTKTLKQLCIDLFNRQLSTNDDSLQKSNNDNVTLLSQISKSNIQTLKFVAKQPTQLPTCLRNPNPILNQTQNSAKIHIISNKILKKASQPLLPTQQQPQISYSFEDLVLRKIQQDKQDTSPRKKKRVAKGAEVITATVGAKILEETDKAKNTKSIKKSTKNYMKKSTTVNKKNYPKRKREPSSDSTITSVSDIISLHSESDIYNDADFEQLMDSYEDDFETCEEQKPLKKYVKTENQNMLTNKDLNNPNFRAKNKGVGKKSKGKENQEDKKGAEKRFEKYDKQCGDDVIKIKEIDVTNREDFIKNVNDEQLLPDLESKLIIYETQERNPIKENYQLEDTVLVRYFIRQKWRYYIGFIEKIIAREETYYFINFLKSMKRQQQLTFFMPKRKDTDEVPESLIVKQIKVQKSDTDKEYCLCYDEDIIYFND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00637506;
90% Identity
iTF_00637506;
80% Identity
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