Egri002955.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- JARID2
- Assembly
- GCA_963662185.1
- Location
- OY759229.1:49149512-49155284[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5 7.9e+03 -1.2 0.0 53 82 82 112 75 114 0.77 2 2 5.2e-14 1.6e-10 42.6 0.0 24 88 171 232 134 233 0.85
Sequence Information
- Coding Sequence
- ATGCTTCTGGTTCCCGGACCTTCAGGCTCGCGCACTAGCGCCCCCTCTTCCAGTAACCAACCTGAGAGAGGTTCTGGTCGATTGGACAACGGGACTGAATCCCCCTCAGGTGGACAAAATAAACCTTCAAGTGTAGAAAGTTGGGGGTGGGAAGATCACATTACCAACTGGGATAAAGAGGAACAGCTACTGTTAAGGCAAAGTTGGCGCCCTTCCACTTTAAATACGTATAGGGCCCCTATAAGAAGGTGGCGGCAATGGTGTAAACTGCATAAGGTGGAAGATAAGAGCCCGGATGGCAAAGACGTAGCTAGATTTTTGGCTAGCCTATACCTACATAAGTCAGCAGTTTCCACATATTGCGCAGCAACAGTAGTTGGCCTATCTAACAACTTTTATATCCATCAGGTGTTAAAAGCCATTTCCCATTCTAAACCAACACCTACCAAACTACCCATATGGGACATAAACACATTATTTGATTGGCTAAAATCATCTGTCTGTTCAGGAGCCCAGGTTCATGGCGTTGAAATTAACGTCGTGAAACTCATGCAGGTTGTTGATAATAACGGTGGCATACAATCTGTTACCGATAACAAAATATGGTCTAAAGTTGCCGAAGATATGAACATCGGCAGAAACCCACACGTGGGACGGAGCCTGCAAATCCTGTATTACAAAGCACTATTACCATTCCTTACACTCTCTGCCGAGGAGCGCGAACAGTACCGCAATACTGAGGACTTGAGATTTGAATCCCTTAATGCCAAGCTACTTAAGCAAGCCCAGGAGCCTTTATATCACCAGAAGCGCATGCTGAGTAGCGATACATCTCCTGACAGTGACTATGACATAAAAGATGAGGAGGCATTATGTGTCGTGCATAGTGGCACCACCATGAACGTGGCTTCGTTTAAAAAgATATCCGGATTAGTACACGAACAGCTATTTAATACAAAGGCAAACTCCTTGGCGGATTACGAGCGTGATTATTGGGATCGAGTGCAATCGGCCGAAGATCATATATGCGTTAACTCGGCGTCGATTGACACAGGCCAGGCCGGCTATGGCTTCACAAAGAGCCCAACTGATGAGTACAGCAAACATCCTTGGAATCTAaagGTACTGAGTCAGCACTCCGGTAACATGCTCCGCCCCCTGGGTGAGGTAGCAGGCGTGACGGTACCTATGCTGCATCTGAGCATGATCTACTCCACTAGCTGCTGGCACCGGGACCCTCACGCACTGCCCAGGATTGACTACTTGCACCACGGTGAACCCAAAATATGGTACTCGGTGCCCGAGAGCCAGGAGGCGCCCTTCCGCGCCGCTACGGAGGTGCTGTGCCCCATCGCGGTGCAGAACAAGGCCATCTGGCTGCCGTCCGACTTCGCCATGATCCCGCCGCGGAGCAGAACGCGGGCGAGTTCATCCTCGTCATGCCCAAAGCCTACTCCTGCTCCTTCAGCACAGGCTACAGCATCTCCGAAAGCACCTACCTGGCCACCTGGCACTGGCTTCCCAATCTGA
- Protein Sequence
- MLLVPGPSGSRTSAPSSSNQPERGSGRLDNGTESPSGGQNKPSSVESWGWEDHITNWDKEEQLLLRQSWRPSTLNTYRAPIRRWRQWCKLHKVEDKSPDGKDVARFLASLYLHKSAVSTYCAATVVGLSNNFYIHQVLKAISHSKPTPTKLPIWDINTLFDWLKSSVCSGAQVHGVEINVVKLMQVVDNNGGIQSVTDNKIWSKVAEDMNIGRNPHVGRSLQILYYKALLPFLTLSAEEREQYRNTEDLRFESLNAKLLKQAQEPLYHQKRMLSSDTSPDSDYDIKDEEALCVVHSGTTMNVASFKKISGLVHEQLFNTKANSLADYERDYWDRVQSAEDHICVNSASIDTGQAGYGFTKSPTDEYSKHPWNLKVLSQHSGNMLRPLGEVAGVTVPMLHLSMIYSTSCWHRDPHALPRIDYLHHGEPKIWYSVPESQEAPFRAATEVLCPIAVQNKAIWLPSDFAMIPPRSRTRASSSSSCPKPTPAPSAQATASPKAPTWPPGTGFPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -