Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421487.1:6044751-6064487[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.6 8.7e+02 2.4 4.2 1 23 318 343 318 343 0.93

2 14 0.0022 0.34 13.1 0.8 3 23 362 383 361 383 0.93

3 14 1 1.6e+02 4.8 1.0 2 22 423 443 422 443 0.93

4 14 2.8 4.4e+02 3.4 0.7 1 14 447 460 447 469 0.82

5 14 7.6 1.2e+03 2.0 2.4 1 23 702 723 702 723 0.91

6 14 0.001 0.16 14.2 0.0 3 23 763 783 761 783 0.97

7 14 0.64 1e+02 5.4 2.5 1 23 805 826 805 826 0.92

8 14 0.0095 1.5 11.1 1.8 3 23 875 895 875 895 0.95

9 14 0.00081 0.13 14.5 5.5 2 23 911 932 910 932 0.97

10 14 1.2e-07 1.9e-05 26.6 2.2 1 23 938 960 938 960 0.98

11 14 0.00012 0.019 17.1 0.7 1 23 965 987 965 987 0.98

12 14 0.086 13 8.1 0.6 2 23 994 1016 993 1016 0.93

13 14 0.27 43 6.5 1.2 1 20 1023 1042 1023 1042 0.90

14 14 0.00052 0.082 15.1 0.8 3 23 1055 1076 1054 1076 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.6	8.7e+02	2.4	4.2	1	23	318	343	318	343	0.93
2	14	0.0022	0.34	13.1	0.8	3	23	362	383	361	383	0.93
3	14	1	1.6e+02	4.8	1.0	2	22	423	443	422	443	0.93
4	14	2.8	4.4e+02	3.4	0.7	1	14	447	460	447	469	0.82
5	14	7.6	1.2e+03	2.0	2.4	1	23	702	723	702	723	0.91
6	14	0.001	0.16	14.2	0.0	3	23	763	783	761	783	0.97
7	14	0.64	1e+02	5.4	2.5	1	23	805	826	805	826	0.92
8	14	0.0095	1.5	11.1	1.8	3	23	875	895	875	895	0.95
9	14	0.00081	0.13	14.5	5.5	2	23	911	932	910	932	0.97
10	14	1.2e-07	1.9e-05	26.6	2.2	1	23	938	960	938	960	0.98
11	14	0.00012	0.019	17.1	0.7	1	23	965	987	965	987	0.98
12	14	0.086	13	8.1	0.6	2	23	994	1016	993	1016	0.93
13	14	0.27	43	6.5	1.2	1	20	1023	1042	1023	1042	0.90
14	14	0.00052	0.082	15.1	0.8	3	23	1055	1076	1054	1076	0.96

Sequence Information

Coding Sequence: ATGTCGGATTTCACGGCGAAACGATCTAGAAAATCGAAGTTGGTACCTCGGAAATACGTCGATATTGATGATGAAAACATTGAAGACTTGCAGCAGAAACCAAgtacttcaaaaagaaaaaagggtaaaaaaaatcatgaaaatGTCCCCAAATTGCCAGAAACAGGTCAAGCTAATGATGACTTTGAGGCCCTCATTGATTCTCAAAAAACCGGAGCAAAAGATTCTTCTCAAAAGACTGGAGCAGAAGCACCTTCTGAAAAGACTGCAACGGGAGTTCCTCCATCACCGTTAAAGTTCTCTGTAACAATAGCAGTAGAAGAATTTGATGAAAGCAGTTCAGAGTTAGTGATCTTAGAACCTGAAAATAATACTATCGAGATCCTCTCTGACTCGGATGATAACGATGCTGCATGTACGACAAGTTTGACAAGTAGAAATGCAAGTGCTCATACAAAAGATTTAGCTTACAATGGACTAGATACGTTAGTATTAGACAGAGAAGATATTCTGAACGAAACTAACAAAATTCTAGAAGAATCTACTGATATAGCTGACAAAATTCTAGGGATAGCAGTCAGAAATTGCATGGGGCAGTACCCAATAAAACAAGAGTATCAAGAAAGTAAGCTTGCTAAAGTATTCATACAATGGCAAGCATGGCAGAAGTtaataaaccaaataaaatatagaaGCTCTCCATTATTCTACAAATGTTACATATGCGAACTATCCTGGTGGTATCTTCACGATTTCCAAGAACATTTGAAATGTCACGATGATTATAACCTAGATCTGGAAGAGTATACCATATATGAAGCAAACGTTATAGCATATGCAAGCGTTGATGATATTTTAGATATAAAACACTTTTATACTGAAGGAGATTGCCCGAAATGTGGTAACGAGTATGCTATACATAAATCAACAAACCGTTCAAAAAACTCACTATACAGTTGTAAAGTGAGATCATGTTATAAGTTATTTAACACATGCTTCGCTCTCAGAAATCATGAATACATGTATCATACTATATCTGAGCTGACTGGTGTACCGTTTCAACTAGGAAGACAGGGGAAAAATTGTGAAGTGTGCGGATTTGTTTTTCATTCACAAGAATCATACCAAACACATATGGATTTAATGCACAGAGTACGGTCTGATTTAATTGTTCCTGCCCAGTATAGAAAATGTAATCGTTGCAAAGCGGTCTATGGTTGGGACcatgtttgtaaaaaaagtgtttttaaggTACATAATCCAGTGTCTTGCAGGTTTTGTTTTAGAAGTTTCCTACAAGCACAGTCATATAGGAACCATATGAACCGAAGTGGTCGCTATCGGTGTAAAGTTTGTAATATTATGTTAACAAGACAATGTTTAGAAGCCGAACATTCTCTGAAGCACTCAGACAAGTTTACGCTTGTGAAGAAATGCGAGGTGTGCGATGAGTTTAATGTTTTCTTGAGTGATGTAGGGGCTTTGAGGCATATTACCGGTCATTACTACTACAGCACTGAAGAAACTTTCACGAAGTATTGCAGTAATATATTGATACCAAAATCATGTTTGACTGAAAAATTGCCGCTCAAACAAAGCACGGTCGTTGAAGAAGAATCAAAAGAAACAATACCAGCCGTAGAATTAGAAATCAAACGCGAAGCAGAAGAAACCGTTGAAAATCAGAGTGACGAAGAATTTGAAAACAAACTACAAATCAAAGAAGAAATAGATATAGAAGACAATTTCGCTGCAGAATATTTGAAAAACGAATATTCTAAAAAGCAAGAGGAAGATGCTGAGTTGCATGCAAGAATTTTCGGCGTGAAAATCGAAGCAAGTGATATAGAAGTGAAGCAAGAGGCAGACGAAGAAGAATATGAGGACGACATAATAAAACTAGACTATAATTTTCTTGAAAACATGCAACAATCTATGgataataatacagcttataTAGAAGGAACCGAAGTAGAAATGCCAGAAATGGACGAAAATACGCAAGAAATGGACGAAAATACGCAAGAAATGGACGAAGAAAGCGAAGGAGATGGAGAAGAGAGCGCAggacataaaaaaaaaggaggAAAACTGCCTAAAATTTATAGATGCAATCGATGTGGGTACGATGGACTTCATAAAGAATATCGGGCTCATTTAAAATCTCATTGCAAAGAAGAGTTATATGAAAGAGATTATTATCCTTGTACGAAGTGTTCGGTACAATTTGACTGTTTTGAGAAATTCATCGATCACTTTTCTGACCATAATCTCAATTCGATGGCTTGCCCGGAGTGTTATAAAATCTATGAAACGTATGACGCGTTGCAAGTTCATTTAGCAACTCACATAGGGATGACATATGTAGTCATTCAATCAATACCGGCTGTAAAAGATGCACCGAATTACCAATATCGGTGTAAACTCTGTCAgaaatttgttaataaaaaggATTTCTTTGTACATTGGGAACAACATCTGTCGTTCATTGAGACAACTAAACTACTAGAAAAGGTAATTGAAAGGGATGAAGAAAAATCGGCGCCTGTTGATAAGGAAATGCTAGACCAGTTAATAGAACGACTTCAATCCCCAGAAGCTTTATTCAAACTGCGGAGAGGCTGTCCAATCTGTCTAAGACATTTCGATCGTAAGAATGACTACAAACGCCATCTAGTGGAGCATTTGTTGAACCATGCGTACACACAGCGCCCTCTACACGCAGCTTTGAAGTGTCAGATATGTGCAAAGTGCTTCCAGAAACCGGAACACTATAAGAAACATATGAGAGACCATGGCTCTTTAAGagattatagATGTGAAATATGTGACAAAAGCTTCAGCGACTCAAGCAATTACACGAAACATAAAAAGATACACAACGCGAACGCGTTCACCTGCGACATCTGTCGGAAAAAGTTCCAGATTAAAGTGTCGCTCGAGAGACATATGGAGATCCATTTAAACCAGAAACCGATCGTGTGCGAGCCGTGCAACAAATTTTTCTACTTAGAATCGGCTTACAAGAAACACTTCCGAATGTATCATGAAAAAGATAGACAGAAATTCTCATGCACAGTATGCAGAAAGAGGTTCTATTCATTAAAAGATAAATGGGATCATCAATGGCTTGTACACAAAGAGAGAAAGCATAAAGCCGATTGTCCAAGGTGCGGTAACACTTACAGAAGGTTCAgggatttaaaaaatcatatgaAAGAAGTTCATAACACGGATATGCGGTGTTTGCAACCTATCAGCATGAAAGACGTgattaaaaaaagaatggtcACCTCCGTCCAAATACCCACGAAGGTCACGAAAAAGGAAACTTTAGTTGTGTATGTGTAA
Protein Sequence: MSDFTAKRSRKSKLVPRKYVDIDDENIEDLQQKPSTSKRKKGKKNHENVPKLPETGQANDDFEALIDSQKTGAKDSSQKTGAEAPSEKTATGVPPSPLKFSVTIAVEEFDESSSELVILEPENNTIEILSDSDDNDAACTTSLTSRNASAHTKDLAYNGLDTLVLDREDILNETNKILEESTDIADKILGIAVRNCMGQYPIKQEYQESKLAKVFIQWQAWQKLINQIKYRSSPLFYKCYICELSWWYLHDFQEHLKCHDDYNLDLEEYTIYEANVIAYASVDDILDIKHFYTEGDCPKCGNEYAIHKSTNRSKNSLYSCKVRSCYKLFNTCFALRNHEYMYHTISELTGVPFQLGRQGKNCEVCGFVFHSQESYQTHMDLMHRVRSDLIVPAQYRKCNRCKAVYGWDHVCKKSVFKVHNPVSCRFCFRSFLQAQSYRNHMNRSGRYRCKVCNIMLTRQCLEAEHSLKHSDKFTLVKKCEVCDEFNVFLSDVGALRHITGHYYYSTEETFTKYCSNILIPKSCLTEKLPLKQSTVVEEESKETIPAVELEIKREAEETVENQSDEEFENKLQIKEEIDIEDNFAAEYLKNEYSKKQEEDAELHARIFGVKIEASDIEVKQEADEEEYEDDIIKLDYNFLENMQQSMDNNTAYIEGTEVEMPEMDENTQEMDENTQEMDEESEGDGEESAGHKKKGGKLPKIYRCNRCGYDGLHKEYRAHLKSHCKEELYERDYYPCTKCSVQFDCFEKFIDHFSDHNLNSMACPECYKIYETYDALQVHLATHIGMTYVVIQSIPAVKDAPNYQYRCKLCQKFVNKKDFFVHWEQHLSFIETTKLLEKVIERDEEKSAPVDKEMLDQLIERLQSPEALFKLRRGCPICLRHFDRKNDYKRHLVEHLLNHAYTQRPLHAALKCQICAKCFQKPEHYKKHMRDHGSLRDYRCEICDKSFSDSSNYTKHKKIHNANAFTCDICRKKFQIKVSLERHMEIHLNQKPIVCEPCNKFFYLESAYKKHFRMYHEKDRQKFSCTVCRKRFYSLKDKWDHQWLVHKERKHKADCPRCGNTYRRFRDLKNHMKEVHNTDMRCLQPISMKDVIKKRMVTSVQIPTKVTKKETLVVYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -