Basic Information

Insect: Eilema caniola
Gene Symbol: ush
Assembly: GCA_949126895.1
Location: OX421464.1:4201424-4208653[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0069 1.1 11.6 0.2 1 20 115 134 115 136 0.94

2 9 2e-05 0.0032 19.5 1.7 1 23 174 196 174 196 0.99

3 9 0.027 4.2 9.7 0.6 2 20 226 244 226 246 0.93

4 9 0.023 3.6 9.9 3.9 2 21 487 506 486 507 0.95

5 9 0.0079 1.2 11.4 0.2 3 20 536 553 534 555 0.91

6 9 1.4 2.3e+02 4.3 0.0 2 23 584 605 583 605 0.94

7 9 0.01 1.6 11.1 1.3 1 23 611 633 611 633 0.99

8 9 0.22 34 6.8 0.3 2 23 673 695 673 695 0.95

9 9 0.22 34 6.9 0.7 2 20 728 746 728 748 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0069	1.1	11.6	0.2	1	20	115	134	115	136	0.94
2	9	2e-05	0.0032	19.5	1.7	1	23	174	196	174	196	0.99
3	9	0.027	4.2	9.7	0.6	2	20	226	244	226	246	0.93
4	9	0.023	3.6	9.9	3.9	2	21	487	506	486	507	0.95
5	9	0.0079	1.2	11.4	0.2	3	20	536	553	534	555	0.91
6	9	1.4	2.3e+02	4.3	0.0	2	23	584	605	583	605	0.94
7	9	0.01	1.6	11.1	1.3	1	23	611	633	611	633	0.99
8	9	0.22	34	6.8	0.3	2	23	673	695	673	695	0.95
9	9	0.22	34	6.9	0.7	2	20	728	746	728	748	0.92

Sequence Information

Coding Sequence: ATGAAAGAGAAGCAAGAAAATAGATTATTTAGAAAAATCTTTGGTGAGGACGAGGAATGGGGAAACGAGAGCGAGGCGATGCCTGGAGAACCTCGCACGCCAAGCTCAGGGGCCGAAAGGGCTGCTTCCAGCGGAGGCGCGTCACCTGCATCGGGGAGCTCACCCGCAGCGTCGCCGCCTCGACTGCGTCTCAACCCCAGCCTCGCCACAGACCCCGCGCTGGCTCCGCAAGCGACGTCGCTGAAGCGCGAGCCGCCTTCACCCTCACCGCCGCCACCTCCCGCACCCCAAGCACGAGCGGACTATATCGCATTCCCACCATTTCTATCATCTCCCCCGAGCTACATGTGTAAGCCCTGCGGAATTCGATATTCATCTCTTAGCACGTTACAAGCACATCAAGAGCATTACTGTTCAAATAGACGGCCAAAGCCAACAGAAGGTACGGATACACCGGCTGACCCGACAGTAGACGAGTCCAGTAGCGATGCGAAGACGCCCCGAGTGCCTAGCAAACAGTATACCTGCACGTACTGTAACTATAGTGCCGATAAGAAAGTCAGTTTAAATCGACATATGAGAATGCATTCATCATCGCCTATCAGTAGTGGAACCCCGGTACCGACACCAGCTTCAAACGGTGAAGTCACTGAGGGTCCGCCGCAGCAGGACCGTTATTGCACCGATTGCGACATTCGATTCAGCTCTATAAAAACGTACAGAGCTCACAAAGCGCACTATTGTAGCACTAGACAGGTTGTGAAACAAGTTTTAGCCACGGCTAGAGGTGGATCTGCCACTTCAGGGTCCTCGCCACCCTCGCCAGGAGCGACACCCCCGGCGCAAAACTCGCAATACGCACTAGCATTGCCTACAAATCCGATACTTATCGTACCATATTCGTTACTACGAGGCGCCAGCACTCTCCCAGGTGCGACATTACCTGACCCAGATACACCTTGCTTTCTGTTACCGAACGGAACATTTCAGCCCATAAGTCGGGCTTTGTCATCAGCCGTTAGTACGGATGGAAAAGAATCTGAAGTTTTGAAAGCAGCCAATCGGCCACGAGAACCATCAAGAGATGGTGCAACCCCTTTGGATCTGAGTGTACGTCGTTCTCCTGAATCCGTAGTGACTGATGAACATGAAAAGGAGAACAGAATACGATCAACGACACCCGAGCAGATCGTATGCGCTCCATCATTACCAGGATCTCCAGGCACGCCATCGCCCTCCAGACGATCCTCGTCGCCGAGCGCAGAATGTTCACCAAAACGAAAGCGGCGCAACTCCAGAGGACCTACTCCAAAGCCTCCTAGTGTGCCATCTCCTCCCGAAGAGAAGTTCACTCCAGTAATATCACCAGCAGGTATGATCCCTCCTGCGCTGGCATTGCGTCTTGCAACCGAATTACCTGCTGTATCCCCTCAAGTGCTCGTCAAGCAAGGCGTATCGAAATGCAAGGAATGCAATATCGTTTTCTGTAAATATGAAAACTATCGTATACATAAACGGCACTACTGCTCGTCTGGTGGCGGTGAAGAGCGCGCGAGTCCTGCACCTCCAGAGCCGGGACCACCGCCACAATACCGCCAGCTAATATGCGTGGCATGCGGAATCCACTTTAGTTCGCTGGACAATCTTACGACACACCAGTCGTTCTACTGCACGAAGAGAGAGACGCGATCGCCCCGTACAGCTCCCACAGAGGCTCCACGACCAACCTCTGGGTCAGAAGGTGGCTGGAAGTGTCCGTGCTGTGACGTGGTGTCCCCGACTGCTGCGGCTGCCCAGCGCCACATGGAAGCGCACGCTGGAGTGAAAGCATTCCGCTGCACCATTTGCCGGTACAGGGGGAACACTCTTCGGGGTATGCGCACACATATACGCATGCACTTCAACAACAAGAAGCCTGCTGATTTGCAGGAAGAAAGCTACATCGCATGCGTCGTCGAAGAAGACAGCCGCGAGGCAACTTCCCCAAGCCCAGCAGTGGGAGGTGAGCGAGTCAACCGCTGCAGCAACTGTGCCTACACCTCCACATACCGAGGCAACGTCGTGAGGCACGCTCGTCTAGTCCACGCCACAGACGAACCCGAGGAAGAAACAACCTCGCCCCCAATCCCTGCTGTCGACATCAAAAAAGAACCAGAACCTGAAATGGAAGAAACCCCCAACTACTGCaagtcttgtgacatatccttCAAATATGTGAACACTTATAAAGCACATAAGCAGTTCTATTGTACTGCAAATAACCAAGACGCAACTGCGAACAACAATGTACCAACACCGACGAGAATCACTGATACGCCTGTACAATAA
Protein Sequence: MKEKQENRLFRKIFGEDEEWGNESEAMPGEPRTPSSGAERAASSGGASPASGSSPAASPPRLRLNPSLATDPALAPQATSLKREPPSPSPPPPPAPQARADYIAFPPFLSSPPSYMCKPCGIRYSSLSTLQAHQEHYCSNRRPKPTEGTDTPADPTVDESSSDAKTPRVPSKQYTCTYCNYSADKKVSLNRHMRMHSSSPISSGTPVPTPASNGEVTEGPPQQDRYCTDCDIRFSSIKTYRAHKAHYCSTRQVVKQVLATARGGSATSGSSPPSPGATPPAQNSQYALALPTNPILIVPYSLLRGASTLPGATLPDPDTPCFLLPNGTFQPISRALSSAVSTDGKESEVLKAANRPREPSRDGATPLDLSVRRSPESVVTDEHEKENRIRSTTPEQIVCAPSLPGSPGTPSPSRRSSSPSAECSPKRKRRNSRGPTPKPPSVPSPPEEKFTPVISPAGMIPPALALRLATELPAVSPQVLVKQGVSKCKECNIVFCKYENYRIHKRHYCSSGGGEERASPAPPEPGPPPQYRQLICVACGIHFSSLDNLTTHQSFYCTKRETRSPRTAPTEAPRPTSGSEGGWKCPCCDVVSPTAAAAQRHMEAHAGVKAFRCTICRYRGNTLRGMRTHIRMHFNNKKPADLQEESYIACVVEEDSREATSPSPAVGGERVNRCSNCAYTSTYRGNVVRHARLVHATDEPEEETTSPPIPAVDIKKEPEPEMEETPNYCKSCDISFKYVNTYKAHKQFYCTANNQDATANNNVPTPTRITDTPVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00050390;
90% Identity: iTF_00405472;
80% Identity: -