Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421487.1:13537867-13557548[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.3e-07 9.8e-05 24.3 1.9 2 23 686 707 685 707 0.97

2 7 0.0034 0.53 12.6 5.7 1 23 713 735 713 735 0.98

3 7 2.6e-05 0.0041 19.2 3.3 1 23 741 763 741 763 0.98

4 7 3.1e-05 0.0048 19.0 5.2 1 23 769 791 769 791 0.99

5 7 9.2e-06 0.0014 20.6 3.5 1 23 797 819 797 819 0.99

6 7 0.0014 0.23 13.7 3.8 1 23 825 847 825 847 0.98

7 7 0.0046 0.72 12.1 3.4 1 23 853 875 853 875 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.3e-07	9.8e-05	24.3	1.9	2	23	686	707	685	707	0.97
2	7	0.0034	0.53	12.6	5.7	1	23	713	735	713	735	0.98
3	7	2.6e-05	0.0041	19.2	3.3	1	23	741	763	741	763	0.98
4	7	3.1e-05	0.0048	19.0	5.2	1	23	769	791	769	791	0.99
5	7	9.2e-06	0.0014	20.6	3.5	1	23	797	819	797	819	0.99
6	7	0.0014	0.23	13.7	3.8	1	23	825	847	825	847	0.98
7	7	0.0046	0.72	12.1	3.4	1	23	853	875	853	875	0.99

Sequence Information

Coding Sequence: ATGGAGAAGCTGTCGATGTGTAGAATTTGTCTCTCCGACGACATTCCATTGCGTTCGATTATTAGGACGCCACTACAAGAGGTGTACGAGTCTTTGACCACGATACCGTTTGTTACAGAAGACAGACCAGTAGTGGTCTGCACCCTCTGTTGTGGAAGGCTCGAGAACTCCTTAGAGCTTAAGGAGAAATGTCTCCAGAGTGAGAAGCTGTTCACAGAGTTGGTGATAAATAATGTGTTTTATAATGACGAAAAAGATGTCCATAATTATTTGCGGGAGTGTAAATTATCTACTACAAGTAGGACAGGGTTGTCTAAGCTGTTTGAAGATGAAGAAACAGATAGTGAAGAGGAAAACATGGATATAAATTGTAACTTTGAGAGGGGAAGGAGTGAAGAGAGGAGGACTGGAACTagtactggaactggtattgatactggaactggtattgatactggaactggtattgatactggaactggtattggtactggaactggtattgatactggaactggtattggtactggaactggtattgatactggaactggtactggtactggaacaagaggtactggaacaagaggtactggaacaagaggaactggaacaagaggaactggtacaagaggtactggaacaagaggaactggaacaagaggaactggaacaagaggaactgatACAAGAGGAACTGAAGCAAGAGGAATTGAAGTTAGTAGAAGCAGAAGACAGACTTTGAGAAGAAATGAGTTAACTAGTAGCGGATCTGAAGATGAGTtgaataatgaagaaaatattttattaaatgaagaTAGAGTGGATGTTTTTGAAGATAGTATAGgagaagatatatttaatactgAGAATAATGAAGTTTTGGAGGAGATAAGAAATGCTGATGAGGTCTCGGAGGGAATAAGAGAAGACGATGAAGTTTCAGAGGGGATTAATGTTGAGAATGAAGCAGTAAGTGCTGAAGCAGAATCTTTTGAAGATGCAGTGGAGGTTGTTGAAGATGTAGGAAGAAGAATTTTACCAATGAGAAATAGAAGATTACCAGAGAGATTGAAGGATTATGATTTGGAGACATCATTTTTGACATATGGTGAAGTTTTGAAGAGTAATGAAAAGGATTTATGGATGAAAGCTATTGAAAGTGAAAAAGATTCTTTAGAAAAGAATAAAACTTGGGAGATTGTGAAGAGATCTGAAGTGAAGAATAGAAAACTAATAACAAagAAAATAGAACAGAATCAGATAGAAATTTTCTATTGTCCAACCAATGCTAATATTGCGGATATTTTAACGAAAGGATTAGACCGAACGAAGTTTTTAAGATTAAGAAAGAGTATTCAAGCCAACCTACAAGTGATGCCCGATGTACACCTGAGCACAGAGGGTGTGATCCAGATAAATCCGAATGTGTTTGGTAATGATGAAGTTAAACAAGAAAATGCTGAAGATGCAAGAGGTGGCAGCGGCCCATCATCGAGGTTACAGGATAATGCGGGAACAGAATACTTCATAAAGCTAGAACGAGATGCAGACGATGTAATGCCAGTTTCTGAACAAGACCCTTTGAAGAGAGATGACCACTTGCAATCATCAGATTCGGTAGACAATATAAGTCTCGCGGTCGTCAAGGTGGATCAAAGAGACGTCACAGCCGATGATGCGCCGGTGGAGCCCGCTTCGAGCTCGGAGTGGGACGTACCTCTAAGTGCTATGAAGGAGGAACCGAATGACGTCGACACTGGTGCTCCTCGACTCCGTAATGATACGCTTTTAGACATCCTCAAGAGAACTGACCAAAGAATGGTCAAGGTTCAAGGACGGAAAAGAGAGACTAGAAGAGACTTTGAAGACACACCAGTTGAGAAGAATAAGATAGTGGAAACTGGCGGTAATATAGATATCAGATTACATTACGATAAACAATATGATAATGATAACACATCCAATCATAGCGACGCTTTCGAAATGTGTGAAAACAAAATCAGTGCAGACCAAAGTGTTAATAGTAGCTCAAGCGACAAACGTAGACCGTGGTCATGTGACACTTGTCAGAAATGTTTTACACGTAAAGCCGATTTAATAAGACATATTCGTATACATAGGGGTCAGAAACCTTTTCAGTGTAAAGTATGTAAGAAACGTTTCAATAGAAAGACATGTTTGGATCTTCACAGTCTTACACACACGGGTGAGAAACCTCATGTGtgtaatatatgtaagaaaGGTTTCAATAGAAAGAGTTCTTTAGATAATCATAATCGTACACACACGGGCGAGAAGCCCTATGAGTGTAATGTATGCAAGAAATGTTTCAACCAAAAGGGTTCTTTGTACAGTCATTTTCGTACTCACACGGGCGAGAAACCTTATGAGTGTAATGTGTGTcagaaatgtttcaatcaaaaGAGTTCTTTAGATGTTCATAGTCGTACACACACGGGCGAGAAACCCTATGAGTGTAATGTATGCAAGAAGCGTTTCAATACAAAGAAATGTTTGGGTATTCATAGTCTTACACACACGGGCGAGAAACCATatgagtgtaatgtatgtatgaaacGTTTCAATAGAAAGATATGTTTGGATATTCATACTCGAACACACACGGGTGAGAAACCTTATGAGTGTAGTGTATgtcGTCAAATTGACTTTGCCGTTCAAAGAATAGTGGCCGCCATTACGGCAAAGAATTCAAAGACATCAAAGGTTCTCCCTCACCTCGTCTTCAAATGGTATATGTACCTGCTCAATGATGGAATGTTCAAACGGCAGTTCACTCCTAATCGCGATTGCTCCCAAATTTAA
Protein Sequence: MEKLSMCRICLSDDIPLRSIIRTPLQEVYESLTTIPFVTEDRPVVVCTLCCGRLENSLELKEKCLQSEKLFTELVINNVFYNDEKDVHNYLRECKLSTTSRTGLSKLFEDEETDSEEENMDINCNFERGRSEERRTGTSTGTGIDTGTGIDTGTGIDTGTGIGTGTGIDTGTGIGTGTGIDTGTGTGTGTRGTGTRGTGTRGTGTRGTGTRGTGTRGTGTRGTGTRGTDTRGTEARGIEVSRSRRQTLRRNELTSSGSEDELNNEENILLNEDRVDVFEDSIGEDIFNTENNEVLEEIRNADEVSEGIREDDEVSEGINVENEAVSAEAESFEDAVEVVEDVGRRILPMRNRRLPERLKDYDLETSFLTYGEVLKSNEKDLWMKAIESEKDSLEKNKTWEIVKRSEVKNRKLITKKIEQNQIEIFYCPTNANIADILTKGLDRTKFLRLRKSIQANLQVMPDVHLSTEGVIQINPNVFGNDEVKQENAEDARGGSGPSSRLQDNAGTEYFIKLERDADDVMPVSEQDPLKRDDHLQSSDSVDNISLAVVKVDQRDVTADDAPVEPASSSEWDVPLSAMKEEPNDVDTGAPRLRNDTLLDILKRTDQRMVKVQGRKRETRRDFEDTPVEKNKIVETGGNIDIRLHYDKQYDNDNTSNHSDAFEMCENKISADQSVNSSSSDKRRPWSCDTCQKCFTRKADLIRHIRIHRGQKPFQCKVCKKRFNRKTCLDLHSLTHTGEKPHVCNICKKGFNRKSSLDNHNRTHTGEKPYECNVCKKCFNQKGSLYSHFRTHTGEKPYECNVCQKCFNQKSSLDVHSRTHTGEKPYECNVCKKRFNTKKCLGIHSLTHTGEKPYECNVCMKRFNRKICLDIHTRTHTGEKPYECSVCRQIDFAVQRIVAAITAKNSKTSKVLPHLVFKWYMYLLNDGMFKRQFTPNRDCSQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -