Ecan052132.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- Bcl11b
- Assembly
- GCA_949126895.1
- Location
- OX421487.1:6974434-6990514[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.021 3.2 10.1 2.1 1 23 277 299 277 300 0.95 2 11 0.088 14 8.1 0.0 1 23 308 331 308 331 0.89 3 11 0.34 53 6.2 2.1 1 23 335 358 335 358 0.97 4 11 0.069 11 8.4 5.6 1 23 362 385 362 385 0.98 5 11 4.2e-05 0.0066 18.5 0.7 3 23 390 411 389 411 0.96 6 11 0.011 1.7 11.0 0.9 3 23 416 437 415 437 0.94 7 11 0.011 1.7 11.0 0.8 2 21 452 471 451 476 0.93 8 11 0.00032 0.05 15.8 0.1 2 23 485 507 484 507 0.93 9 11 0.0017 0.26 13.5 4.8 1 23 513 536 513 536 0.97 10 11 0.0013 0.21 13.8 0.3 3 23 547 567 546 567 0.98 11 11 0.00016 0.026 16.7 1.1 1 23 573 596 573 596 0.98
Sequence Information
- Coding Sequence
- atggatattaaaagaaaatgtgAGCAGATAAATATTCTATGCCACGGTTGTCTGACTGAAGACCGAACAGTCCACCGCATTAGCGGAGACATCAGTGAAATGTTCTATGGACTTAGAAATGATAAACGCAGTAAAAAACGtCTGGAACTTGTACTGTGTTGGGAGTGCATTGCATTTCTGAAGAAATTGCAGATGTTTAAAGCGAGGATCAAAACAGCACAATGCTTGCTGATGCAGtacataaaatgttattgtaaaaaagatcCCGTTCCAAAGTTCAGTAGCTTAtcatcattatataaattacATATCAACACATTTGATTATGAGTTTGAAGAAAAAGAGAAACCTGTATTTGAAGAACTTCAAGGACATGATGAGGAGGATGATGTAACAAAGGAGAATGATGTAATGATTGAATATGATAATAAGGAATTAGTAGATGTACATCAAAATGAAGATTTACAAGCTGGAAAATTACTAACAGATATAAAAGTAGAATATGATGATAGTATGAAAGTAGAAAATAATGATatcaaagaagaaaaaaatgatagtataaaagaagaaaataacagtAGTAATGACAACAATTCGGATTATGAACTGGTACCCCAATTTGAGATTGAAAAGACTAAAGAAAAATCTACacctaaaaaatattacaaaaaatgtaAGAAGTATCAAATGTTTGCAACGGTGACTAAAAGAAAGGATGTTTCAAAGAATACTTATTTGCAGTTTGTGGAATCCGTATCATTAGATCAGAAAGAGTATGAGAAAGTTTTGAAACGAGATAGGGTTCGTTATGGGTACCCTAAGATGCCATTCAAGTGTGAGGTGTGTAGAGAAGGCTATTTTAGAAAATTGGACTTACAGTGGCATAAGAGTCTTCATCATGGTAATGAGtcaACATTCCCATACAAATGCGAAGATTGCCCCACTATTTTGACGTCACTGGAACAGCAAGAGCAGCACTGGGCAGCGGCCCACTCTAAACAGTATAAGTGCACTATATGTACCCAGGTGCACCAGTCGGCtaatgaaatcaaaaaacatatacAAAGGAGACATTGCATGAATTACTCCTGCAACAAGTGTGACTTCCATTGTGGGAGTCCTTATGAGTTTGGGAAGCACTACAGGATGAGGCATGAGAGAGTCTTTTGCGACTATTGCAACGTGAAGTTCAAGCAAAAAAGTGCTTTGATATCTCATATAAAGCTCTTGCATATCCCGGCATTCTGTGGCATATGCAACCGCACATACGTCAGCAGCCAAAAATTGAAGTACCACAACCAGATTACACACCCTGAGCTGAACGCCGGCACCGAGGTACGCAAGGAGCTATCGTACTGCGTGGAGTGTGACAGGCAGTTTCCGACTGAGTACAAGTACAAGCAACATCTGAAGCAGTCTGTCAAGCACACCAAGCCGAAGAAAGTCAGTGTGCCGTGTCCAGACTGCGGCAAGGTGTTCAGTAAAATCTGGTACATGAACAATCACTTTAAACTGGTGCACCTGAAGGCCAGCCCACACTACTGCGACAAATGTGATAAGTACTACACGAGCGGCCACGGACTTCGCAAGCACATAAAGAAAATTCATAACAAGATCACACAACCCAAGGACAAAATATGTGACTTCTGCGGACGGGGGTTTGCAactaataatatattaataaaccaCCGTCGCACACACACCGGCGAGCGGCCTTTCAAGTGTAAGTTCTGTCCTGCGGCCTTCGCGCAGAAGTTCGCCATGACCACTCACCAGAGATCGCAGCACAAGAACTTGGACCAGTCTAGTTAA
- Protein Sequence
- MDIKRKCEQINILCHGCLTEDRTVHRISGDISEMFYGLRNDKRSKKRLELVLCWECIAFLKKLQMFKARIKTAQCLLMQYIKCYCKKDPVPKFSSLSSLYKLHINTFDYEFEEKEKPVFEELQGHDEEDDVTKENDVMIEYDNKELVDVHQNEDLQAGKLLTDIKVEYDDSMKVENNDIKEEKNDSIKEENNSSNDNNSDYELVPQFEIEKTKEKSTPKKYYKKCKKYQMFATVTKRKDVSKNTYLQFVESVSLDQKEYEKVLKRDRVRYGYPKMPFKCEVCREGYFRKLDLQWHKSLHHGNESTFPYKCEDCPTILTSLEQQEQHWAAAHSKQYKCTICTQVHQSANEIKKHIQRRHCMNYSCNKCDFHCGSPYEFGKHYRMRHERVFCDYCNVKFKQKSALISHIKLLHIPAFCGICNRTYVSSQKLKYHNQITHPELNAGTEVRKELSYCVECDRQFPTEYKYKQHLKQSVKHTKPKKVSVPCPDCGKVFSKIWYMNNHFKLVHLKASPHYCDKCDKYYTSGHGLRKHIKKIHNKITQPKDKICDFCGRGFATNNILINHRRTHTGERPFKCKFCPAAFAQKFAMTTHQRSQHKNLDQSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -