Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421490.1:2285184-2303496[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00019 0.03 16.5 0.8 1 23 395 417 395 417 0.98

2 9 9.1e-06 0.0014 20.6 0.4 3 23 467 488 465 488 0.96

3 9 0.0029 0.45 12.8 0.7 2 23 494 515 494 515 0.97

4 9 9.4e-05 0.015 17.4 4.1 1 23 523 545 523 545 0.97

5 9 8.9e-06 0.0014 20.7 0.8 1 23 550 572 550 572 0.96

6 9 0.00015 0.024 16.8 1.4 1 23 581 603 581 603 0.99

7 9 2.5e-06 0.00039 22.4 0.5 1 23 609 632 609 632 0.97

8 9 0.025 3.9 9.8 0.4 1 12 638 649 638 661 0.87

9 9 2.8 4.3e+02 3.4 4.2 1 23 669 692 669 692 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00019	0.03	16.5	0.8	1	23	395	417	395	417	0.98
2	9	9.1e-06	0.0014	20.6	0.4	3	23	467	488	465	488	0.96
3	9	0.0029	0.45	12.8	0.7	2	23	494	515	494	515	0.97
4	9	9.4e-05	0.015	17.4	4.1	1	23	523	545	523	545	0.97
5	9	8.9e-06	0.0014	20.7	0.8	1	23	550	572	550	572	0.96
6	9	0.00015	0.024	16.8	1.4	1	23	581	603	581	603	0.99
7	9	2.5e-06	0.00039	22.4	0.5	1	23	609	632	609	632	0.97
8	9	0.025	3.9	9.8	0.4	1	12	638	649	638	661	0.87
9	9	2.8	4.3e+02	3.4	4.2	1	23	669	692	669	692	0.94

Sequence Information

Coding Sequence: ATGTTGCATAACACAGGGCCTTATGGGCCAAACGAGACGCCTGTGAACATGGCAGCGCCTGTGAATGTGACTCCTACTGGCCACATGAATATCGTAAGCAATATCAATCATTTGGCTAAACTAGGCCATGGAAATACCCCAGCGCCGAGCGTACCCTACGGTCTAGGAGACTATGCAGTCTACCACCACCAGCATTTCAATATGACCTCCCAAATGGCTCAGTTTCCGAATCATCAATACCAACATTTGGGGTTCCCACATAGTTATTCGAATCACAACCCTAGTTCAGCCAACGATTGTAATGGTATGCTGCCTATGAATTTGAACGTACATAACGATATTAACACTAATATGATGTATCCTTATGAGAGAAGGTATATGGAGACTGTTAGACCTGATATAATAAAAGAGCAAAACACAAGGAAGGTACCCTTGAATATACCTCAAATACCAAATAAGGTTTTACCCAAACAGCCTTTATTCGGCAATGATTATTTACATAGTACTCCATTCCATAATCCAAATCACAATTTAGATTTAAGCATGAAAccgcaagaaagactagaaataAGTAGttcaagaagaaaaaaaattgaaaacacGGTGAAACTAATcgagaatattttaattaactcGGCCAATACTCCTAAAGAAGTGGTAAGAGAAACAGTAAATGATATACCTAACAATattagttttgaagatgatgaagatgatgttgatgattatTCAGATCACTCTGACGCATCACCGAAAAGGTCTACGAATGATACAGAAGTACCGCCAGTAGCAACTGAATGTGATCCTTTACCGTTAACTGTGACGGACTCAAAAAAAGATACTGAACAAAAACGTGAGAGCATAATAAAAAGCCCTGTACATGTTAACGTTGACAAATTAGAAACCGTTCATGAAACAACAACAGATGTAGAAGATGTGAAACCAGTAGGTATAACAGTGGAAATAGTTCCTGATGATATTCCAGAAACATCAGACAAATGTATCGAAATTAAAGTTGAGAATGCAAGTTGGACTGATACGGATTACGTGCAGCCATATTTTAGAGACAGTCATGCGTTCCAAAGAGATGAAGTAATGGATTTACGAATCGTTGATAGTGATTCTAGTGTCATTGAAGCTATTGCCGCTATTCGAAATACAGAAGTGAAATCAGACAATTGCTACGAATGTCCACACTGTGgcgtaatattcaaaaatccaAAACGATTTCTCATACATACCAAATGGCATACCTTCGGCCTCACGAACGAGAAGAGACTGGAGCTGATGAGGGATAAAGAAGAGAAGAAAATTCAGCGGAAGGAGGCCAAGATTGTCGAGAGGATGAACGCTATGGAGGTGACAGACGAGAAGCAGGTGGAAGGGAAGACCTGGGCTTGTAAAGACTGTGATAAAGTGTTCAGTGCGAAGGGTAGCTTGAAGAACCATCGGCAAAGGGTCCACCCAACCCGTACAAGAGAATGCAGAGTATGTCACAAGTCGCTGGTAGGATGGCTCTCTCTCCGGAACCATATGGCCACTCACGCTGGTGAAGCAGGCGTTGGTTTCCAGTGCAGCCAATGTCCAAAGAGATTCAAGTACTCGCATTCATTGGCTAAGCACTCTGATACACATTTGGAAAAAGTCCACGCATGCGCTGActgcccgaagaaattcggctCTCAAGCGCTACTCAAGATGCATATGAAAACTCACGAACGGCACTCAAGAGGGGCTACCTTCAGATGCACCTACTGCGCTAAGGGATTCTTTGAATCGTATAGTTTACAGgTACACGAAAGAACCCATAGAAACGAGAGACCGTACGTGTGCGAGATATGCAACACCAGTTATGGAACCAATTCGAGTCTCAAGAGGCATTTGAAAGTTTCCCACAGTACATCCAAACCGTTCGAGTGCTCTATCTGCCACCGGTCATTCTCCACGGAGCCAATACGAGACCGCCACGAACAGAGAGCCCACAGCAATCCCGAGGACTTTAAGTTCCCATGCAAGCAGTGTAAATGCAAGTATCTTAAACTGAAGGACTTACAAAAACACGTATACAAAGCACATCCCAAAAATAAGAGAAGGAAAAAGGTGAAAAGCGAATCTGATCCCGAAGATGATTCCGAATAG
Protein Sequence: MLHNTGPYGPNETPVNMAAPVNVTPTGHMNIVSNINHLAKLGHGNTPAPSVPYGLGDYAVYHHQHFNMTSQMAQFPNHQYQHLGFPHSYSNHNPSSANDCNGMLPMNLNVHNDINTNMMYPYERRYMETVRPDIIKEQNTRKVPLNIPQIPNKVLPKQPLFGNDYLHSTPFHNPNHNLDLSMKPQERLEISSSRRKKIENTVKLIENILINSANTPKEVVRETVNDIPNNISFEDDEDDVDDYSDHSDASPKRSTNDTEVPPVATECDPLPLTVTDSKKDTEQKRESIIKSPVHVNVDKLETVHETTTDVEDVKPVGITVEIVPDDIPETSDKCIEIKVENASWTDTDYVQPYFRDSHAFQRDEVMDLRIVDSDSSVIEAIAAIRNTEVKSDNCYECPHCGVIFKNPKRFLIHTKWHTFGLTNEKRLELMRDKEEKKIQRKEAKIVERMNAMEVTDEKQVEGKTWACKDCDKVFSAKGSLKNHRQRVHPTRTRECRVCHKSLVGWLSLRNHMATHAGEAGVGFQCSQCPKRFKYSHSLAKHSDTHLEKVHACADCPKKFGSQALLKMHMKTHERHSRGATFRCTYCAKGFFESYSLQVHERTHRNERPYVCEICNTSYGTNSSLKRHLKVSHSTSKPFECSICHRSFSTEPIRDRHEQRAHSNPEDFKFPCKQCKCKYLKLKDLQKHVYKAHPKNKRRKKVKSESDPEDDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01167058;
90% Identity: iTF_01167058;
80% Identity: -