Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421463.1:15925789-15935169[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.11 17 7.8 3.0 2 23 208 230 207 230 0.92

2 12 1.6 2.5e+02 4.1 0.3 6 23 240 257 238 257 0.92

3 12 0.029 4.6 9.6 2.0 1 19 290 308 290 313 0.90

4 12 5.9 9.3e+02 2.3 0.4 6 23 323 340 321 340 0.94

5 12 0.00053 0.082 15.1 0.3 3 23 348 368 346 368 0.96

6 12 0.00013 0.021 17.0 3.1 1 23 376 398 376 398 0.97

7 12 0.0015 0.24 13.6 2.3 1 23 407 430 407 430 0.97

8 12 0.00027 0.043 16.0 0.2 1 23 436 458 436 458 0.97

9 12 1.5e-06 0.00024 23.1 3.4 1 23 464 486 464 486 0.97

10 12 0.00047 0.074 15.2 1.0 1 23 491 513 491 513 0.98

11 12 3.6e-06 0.00057 21.9 4.2 1 23 519 541 519 541 0.97

12 12 0.00017 0.026 16.7 2.9 2 23 548 570 547 570 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.11	17	7.8	3.0	2	23	208	230	207	230	0.92
2	12	1.6	2.5e+02	4.1	0.3	6	23	240	257	238	257	0.92
3	12	0.029	4.6	9.6	2.0	1	19	290	308	290	313	0.90
4	12	5.9	9.3e+02	2.3	0.4	6	23	323	340	321	340	0.94
5	12	0.00053	0.082	15.1	0.3	3	23	348	368	346	368	0.96
6	12	0.00013	0.021	17.0	3.1	1	23	376	398	376	398	0.97
7	12	0.0015	0.24	13.6	2.3	1	23	407	430	407	430	0.97
8	12	0.00027	0.043	16.0	0.2	1	23	436	458	436	458	0.97
9	12	1.5e-06	0.00024	23.1	3.4	1	23	464	486	464	486	0.97
10	12	0.00047	0.074	15.2	1.0	1	23	491	513	491	513	0.98
11	12	3.6e-06	0.00057	21.9	4.2	1	23	519	541	519	541	0.97
12	12	0.00017	0.026	16.7	2.9	2	23	548	570	547	570	0.95

Sequence Information

Coding Sequence: ATGGCTATGGTCTTAAAAGATGTTTGTCGATTATGTGCAAAGAAGCACGAATTTTCAAAGGATTTATTAGATGAAAGTAATAGACATCTATTGAAATTAATACAAGATTTTATACAAATCATGGTCTATGATAACGACAATTTATCATCTAAAATATGTTTGGATTGTGAAGAAAAAATGGTTTCAtttcaattattcgtacttgAGTGCTATAAGGTTCAAGAAACTCTAAAGAAGATGTATGAAGATAGTTTTGATTCTTTGGATATAAAACTTGAAAAGGTACCTATAGACTATGATGTGTCAATCAAATCTGAGGTTAAAGATGAAGTCACTGCTGAAGATATTGTAAGTGCACTGAATAATGATGCCTCATTATCAGTAATAGATGCTTATCCAGATAGTAGTGATACTGACATCCAAAACGATGATGTTGATATTCATAATGGAGATGAAGATAATGACACTGATGATGAATATCTGGACAAGATAGCCCTTGCAGCCCTTAAACCAGTTAGAATGAAGCgaattagaaaaaaagaaataacaccAGAAGAAGCAGAGGAATTCAATCAAGTTCTCAAGAAGCCGAATTTAAAAGTTAAGGATTTAGTGAAGTTACAATGCGTTTTTTGTGAAGAAAAATGCAAAACTTGGAATAGTTTACATGCACATTACACAAATGTGCACAAAAGTGAACCTTATGTATACTGTTTGTGTGGTTTTGTTGTGAGATCTAAGAGCGTTCTTTACAAACATGTATCGGATCACAAGCTTGAGAGTAGAAAATTGAGGACAGATTTAGAAACAGCTGATGAGTCACTTGatgtaaaatattcaaatctgaACGTAAAAGATTTTATAAGATTCATCTGTCCAAAGTGTGGTAAAAATAATACAAGTTGGTACACTCTAAAATCTCACTGTGAAAGAGCTCATAAAATAATGCCCACAGTTACTTGTAGCTGTGGCATTACTCTTAAATCAAAGTCCGTCATGTATAAGCATGTACAAGACCATAGAAATCCAAATTTACTAGCCTGCGATAAGTGCCCACGGGTCACAAAGACTTTAGCCGCCTTAAATAAACATAAGATGAGACATATACCAAAATCCGAAAGAAAATTCTGTTGCAGTTCATGTGAGAAAATTTTCACTTCTAAAGATGCATTAAAATCTCATGAAAGATCTCATATACCCATAGAGGAACGTAAGATTTATCACTGTGAGACATGCAATATGAAatTTACAACGCGGTCTTCGGCTGCGTCCCACAAGCGCGTTGTTCACGAGAAGATAAAAGGGTACGTTTGTGATCTGTGCGGGTACGCATGTGGCACAAACGGCGAGTTGCGACAACACCGCGCCATACACAGCGACGATAAACCTTTCGCTTGCAGGAAATGTTCTAAAAGCTTTAAAACATATTCGAATCTGAAGACGCATATGGACACTCACGAAGAGACATCGTACGAGTGCTACATATGCAGACGCGTGTTGAACAGTCGGCGCACGCTCCGCAAACATCTCCTCGTGCACGAAGATAAGTGCAGACATGTTTGCTCTTACTGCAATAAGGCCTTCAAGAGGAGGCAGACGCTAAAGGTGCACATGTACACGCACACGGGCGACAAGCCGCTGACGTGCAAGTGGTGCGACGAGCGCTTCTCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGCTGGCGCAGTCGCACGACGCCTACGCGCCATACAACCATATCGCTATGCAGGAGGATTATAACATCAAGAACGATGTAGCAGGTGTGAGTGTACCCGTGGCGAAGAACGAAGTCGAGGCTATGTAA
Protein Sequence: MAMVLKDVCRLCAKKHEFSKDLLDESNRHLLKLIQDFIQIMVYDNDNLSSKICLDCEEKMVSFQLFVLECYKVQETLKKMYEDSFDSLDIKLEKVPIDYDVSIKSEVKDEVTAEDIVSALNNDASLSVIDAYPDSSDTDIQNDDVDIHNGDEDNDTDDEYLDKIALAALKPVRMKRIRKKEITPEEAEEFNQVLKKPNLKVKDLVKLQCVFCEEKCKTWNSLHAHYTNVHKSEPYVYCLCGFVVRSKSVLYKHVSDHKLESRKLRTDLETADESLDVKYSNLNVKDFIRFICPKCGKNNTSWYTLKSHCERAHKIMPTVTCSCGITLKSKSVMYKHVQDHRNPNLLACDKCPRVTKTLAALNKHKMRHIPKSERKFCCSSCEKIFTSKDALKSHERSHIPIEERKIYHCETCNMKFTTRSSAASHKRVVHEKIKGYVCDLCGYACGTNGELRQHRAIHSDDKPFACRKCSKSFKTYSNLKTHMDTHEETSYECYICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLTCKWCDERFSYASTLRSHRLRCHPDKLAQSHDAYAPYNHIAMQEDYNIKNDVAGVSVPVAKNEVEAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707233;
90% Identity: iTF_00405302;
80% Identity: -