Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421482.1:12902668-12905769[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.04 6.2 9.2 0.1 5 23 358 376 357 376 0.96

2 12 0.01 1.6 11.0 0.4 3 23 384 404 382 404 0.94

3 12 3.6 5.6e+02 3.0 0.3 3 23 413 433 411 433 0.85

4 12 1.6e-06 0.00025 23.0 1.2 2 23 439 460 439 460 0.98

5 12 0.0033 0.52 12.6 4.3 1 23 466 488 466 488 0.98

6 12 8.1e-05 0.013 17.7 1.3 1 20 492 511 492 513 0.94

7 12 0.00023 0.036 16.2 0.2 1 23 546 569 546 569 0.95

8 12 0.0013 0.2 13.9 0.0 3 23 578 598 577 598 0.98

9 12 3.3e-05 0.0051 18.9 0.4 1 23 609 631 609 631 0.98

10 12 8.7e-05 0.014 17.5 4.5 1 23 637 659 637 659 0.98

11 12 0.0032 0.51 12.6 0.3 3 23 667 687 665 687 0.98

12 12 2.3e-05 0.0035 19.4 0.8 1 23 693 716 693 716 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.04	6.2	9.2	0.1	5	23	358	376	357	376	0.96
2	12	0.01	1.6	11.0	0.4	3	23	384	404	382	404	0.94
3	12	3.6	5.6e+02	3.0	0.3	3	23	413	433	411	433	0.85
4	12	1.6e-06	0.00025	23.0	1.2	2	23	439	460	439	460	0.98
5	12	0.0033	0.52	12.6	4.3	1	23	466	488	466	488	0.98
6	12	8.1e-05	0.013	17.7	1.3	1	20	492	511	492	513	0.94
7	12	0.00023	0.036	16.2	0.2	1	23	546	569	546	569	0.95
8	12	0.0013	0.2	13.9	0.0	3	23	578	598	577	598	0.98
9	12	3.3e-05	0.0051	18.9	0.4	1	23	609	631	609	631	0.98
10	12	8.7e-05	0.014	17.5	4.5	1	23	637	659	637	659	0.98
11	12	0.0032	0.51	12.6	0.3	3	23	667	687	665	687	0.98
12	12	2.3e-05	0.0035	19.4	0.8	1	23	693	716	693	716	0.96

Sequence Information

Coding Sequence: ATGGATACGTGGGCCAATCTTTGTCGATGCTGTTTGTCTGCCAATTGTGAAGTGTCATTGTTAGATAGAGAGCAAAATGTTAATGAAAAGTTTCTTGAAGTTACTACAATAGAGGTTAGAGAAGATGATGGTCTACCACAGAAGCTGTGCAATGACTGTTACAGCACCATGATTTCTGCGCATCAGTTTCGTAAACAATGCATTAAGATGGATAATGAACTGAAACTACAAATTAGTGCTTTGTTAGACCCTGAAGAAGCAGATGAACTGAAACAACACACTGCCCTTCCAGAATTTAATTCATGTGAAgaagatgatgacgatgatatcGCAAATGATCCTGTGAAGCAATTAGAAGCTATAATAAAGAAAGAACCTACCGACAGTGATGACGATTATTATTATGTGTTGGTGATAGATGATCCTAAGGATAAAGGTAATGGAGAAAAGGAAAAATTTCCAGAACCGTTATGTGAAGATAAAATCAAAGTTGAACCTGAACAGCACGATGAACCTGTTCATGAACCAGTGAAGAGTCAAAGCACTCCTCAGAATCAGTATGACGATTCAATTGAAGCTTTCTTAATGTCTAATAATAAAGTCCCTGCAAATGTACCAGCTACTATTCTAGAAAATGAAGAAGAAAGCCAGGAAACTGATGATTTGGATGATGCTATGAACATTGATGAAACACAAGACAGTACTTCCCAAGATCAACTGTTACCGCATATTGTAGATTCGCAAGATGGTCAAATCATTGAAACAATAACCCCTGATGATATTAAAGATCTACCtaataaaaatttcatcaagatattaaCAACTACTGACTCCAACGGTACGATTCTTTTAAAGGGTAATGATAGGATACAATATCTCACTGATACACAACTAGTCACAAATGAAGATGACGACGGAGACGCTATGTCTCAAGAAGTAATATTCTGTGAAGGAGATGACTCCTCTCAATTCCAAATATTAAAGTATGATGGCTCAGAATTAGTCATAGAGTATGCTGATGAAGGTCACATATCCACAGTTCTTCAACAAGAAGATGGTACATTTTTATGTGATTGCGGTGAACAGTTCGAAGACCTAGCCGACTATGAAAAGCATCAATACAAGCATAATCCAGCTGGGGAACACTTGTGCAATTTATGCGGCAAAGGTTTTGAATCTAACGAGATTTTAACCGGACACATGTTACTACACAGTAGCACAGGACTTTTGATCAGCTGTCCCTTCTGTACCCAGCTTATAAGACGCAATGCTTTGACTCAACATATCAAATATGGCCACAATAATATTAAACCTCGCTGTAGCCTTTGCTTCAAGACCTTTGCAAATCCAAATAACTTAAAACGGCATATGATGATCCATAGCGGTATCAGGGAATTCGAATGTGATATTTGCTTCAAAAGATTCCACCAGAAGATTACTATGCAGACACATCGACTGACTCATATGCATCCATTTTCTTGCAATCAGTGTGACAAAACTTTCCAAACAAAGAATAACTTGAATATGCACAAGGAATCTGATGAATGTACTAAATCTAAGGTTATTAAAGTTAAAGAAGAACTAATGAAGACTGTGAAGCAAGAAATTACCACTAATCTTGGCAAACTCTTAGGATATGCTTGTTCTTTATGCaagaaaatgttttctgttGAATCAGCCTTAGAACAACATGTTGAAAGCACTCATATCATAGATCCAACTGACTTGCTATGTTCGGAATGCGGTGAAGTGCTACCGAATAAGAGAGACATGCAAGCCCACATTGCTACCCACAAAAATCTTAAAGCAAAAAATGCAAAGAGATTTGAGTGCAGCATTTGTGGTAAAGGATGTTCGAGCCAAGCTATGTTGCTCATGCACGAACGGGTCCACACAAACGAGAGGCCATTCCCTTGCCAGCTGTGTTCTCTCCGTTTTAAGACTAAAACTCATTTACGCACCCATCAATTGACTCATACAAGGGAAAAGAAATTTGGTTGTTCAGTTTGTATGAAGTTCTTTGCGCTGAAAGGTAACTTAGTGGTTCACTTACGTACTCACACAGGTGAGAGACCTTATGTTTGTTCTTTATGCGGAGAGGCATTTATAGATTCTAAATATTTGAAGAAGCATAAACTTAAGAAGCATGCAATAGACAATGTTCCATGGAACCAATACTAA
Protein Sequence: MDTWANLCRCCLSANCEVSLLDREQNVNEKFLEVTTIEVREDDGLPQKLCNDCYSTMISAHQFRKQCIKMDNELKLQISALLDPEEADELKQHTALPEFNSCEEDDDDDIANDPVKQLEAIIKKEPTDSDDDYYYVLVIDDPKDKGNGEKEKFPEPLCEDKIKVEPEQHDEPVHEPVKSQSTPQNQYDDSIEAFLMSNNKVPANVPATILENEEESQETDDLDDAMNIDETQDSTSQDQLLPHIVDSQDGQIIETITPDDIKDLPNKNFIKILTTTDSNGTILLKGNDRIQYLTDTQLVTNEDDDGDAMSQEVIFCEGDDSSQFQILKYDGSELVIEYADEGHISTVLQQEDGTFLCDCGEQFEDLADYEKHQYKHNPAGEHLCNLCGKGFESNEILTGHMLLHSSTGLLISCPFCTQLIRRNALTQHIKYGHNNIKPRCSLCFKTFANPNNLKRHMMIHSGIREFECDICFKRFHQKITMQTHRLTHMHPFSCNQCDKTFQTKNNLNMHKESDECTKSKVIKVKEELMKTVKQEITTNLGKLLGYACSLCKKMFSVESALEQHVESTHIIDPTDLLCSECGEVLPNKRDMQAHIATHKNLKAKNAKRFECSICGKGCSSQAMLLMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSLCGEAFIDSKYLKKHKLKKHAIDNVPWNQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198026;
90% Identity: iTF_01166951;
80% Identity: -