Ecan034031.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema caniola
Gene Symbol
zfy1
Assembly
GCA_949126895.1
Location
OX421475.1:948079-949503[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00031 0.048 15.8 0.2 2 23 157 178 156 178 0.97
2 11 2.5e-05 0.0038 19.3 3.3 1 23 184 206 184 207 0.95
3 11 0.0052 0.81 12.0 0.3 1 23 214 236 214 236 0.98
4 11 6.8e-06 0.0011 21.0 0.5 1 23 242 264 242 264 0.99
5 11 1.9e-06 0.0003 22.8 4.2 1 23 270 292 270 292 0.98
6 11 2.3e-06 0.00037 22.5 3.9 1 23 298 320 298 320 0.99
7 11 6.4e-06 0.001 21.1 0.2 3 23 328 349 327 349 0.97
8 11 0.024 3.7 9.9 0.8 2 23 355 373 354 373 0.85
9 11 0.00022 0.034 16.3 1.2 1 21 379 399 379 402 0.91
10 11 0.39 61 6.1 1.2 1 23 408 432 408 433 0.95
11 11 0.00019 0.03 16.5 5.4 1 23 439 462 439 462 0.97

Sequence Information

Coding Sequence
ATGGACACAAAAATATGTCGTGTTTGTCTTGAACAGTCAGCAACCATATCTATATTTGAGAAACAGGAAGATATACAATATAGCACGAAGATAATGAGATGTGTTAGCGTAGTGATTGTCGAAGGCGATGGTTTACCAGACGCGATATGCGTCAACTGTGCCGCAGAACTGTGCACGTCGTTCGACTTCGTGAACAAGTGCGAGGCGTCGGACAAGGCGCTCCGAGATACTAAAATAACTGACCTATACGTCGATATGGGTCCTAAATCTGAACCCGATATCAAAATCGAAGATATCAAGTTAGAAATCCCTCTAGATGACGATCATTATGATGATTACACATTAGATGATGAAGATCATGGAGCCCCCTGTGCCTATGATGGCCCAAaacttaaaagaaaatatacaaaaacaaaaaaatttagaGAGGGTGTTAGAAAAAGAAGAAAGCCCAAAATGGGACCAATCAGATGTGTTATCTGTGGCCATGTTGCTGCCAGTCGCTCAGCGATGGAGAGCCATATGAGGACTCACACAGGGGAGAAACCGTTTATATGCCACTACTGCGATGCTAGGTTCAATCTGAAAGGTTCACTCAAGCGGCATATAGCCACGCATCATATGGAGAGAGAACGGAAATTTATTTGTGAAACATGCGGAAATAGCTTTTTAAGCCGAAATAGTATTATAACACACATGAGAGTACACACAGATGAAAGACCATACACTTGCCCTTTTTGTCCCAAAGCTTTTAGACAGATTGCTTCAATGATTCGGCATAAACGTATGCACACTGGGGAACGTCCATTCACATGTCCGATCTGTTTCAAAAAGTTTACTGACAAAAGTCATATGAACAGGCACCAAACTGTCCACAGCAACGAGAAAAACTTCACATGTCATCTATGTAACAAGTCTGTTAAAACTAGAAACGCTCTTACAACACACATGAGAACTCATACTAATGAGAAACACAACATATGTAGCTACTGCGGTGTGACATTCTCTTTGAAAGGTAACCTCCAGGTACATATAAAAAGGATACACTCTGAAAAGTCGGGAGAATGTACTGAATGCAGAAAAACATTCTCCGATCTAGCATCACATATGTATAAGCATACTGGAGAGAAACCATATGTTTGTAAGTTGTGTAACCAAAGGTTTGCGAGTAAGCGGAGTTTGTCAAATCACATAGGGTTCAGGCATGAGAATGCTTCGAAATTCAAGTGTTCTATAGGAGAATGTATTAAGACTTTCCCTACGTCTATGATGTTAGAGTTCCATTTACTGAAGCACCACACGAATCATACTCCGTATATCTGTCATCATTGCTCAAGAGGTTTTTTCCGAACCAGTGATCTCTCTCGTCACCTTAAAATGAGTCATATGGACACTCTTAAAGCTACGGGCAAAGACTTTGTGTAA
Protein Sequence
MDTKICRVCLEQSATISIFEKQEDIQYSTKIMRCVSVVIVEGDGLPDAICVNCAAELCTSFDFVNKCEASDKALRDTKITDLYVDMGPKSEPDIKIEDIKLEIPLDDDHYDDYTLDDEDHGAPCAYDGPKLKRKYTKTKKFREGVRKRRKPKMGPIRCVICGHVAASRSAMESHMRTHTGEKPFICHYCDARFNLKGSLKRHIATHHMERERKFICETCGNSFLSRNSIITHMRVHTDERPYTCPFCPKAFRQIASMIRHKRMHTGERPFTCPICFKKFTDKSHMNRHQTVHSNEKNFTCHLCNKSVKTRNALTTHMRTHTNEKHNICSYCGVTFSLKGNLQVHIKRIHSEKSGECTECRKTFSDLASHMYKHTGEKPYVCKLCNQRFASKRSLSNHIGFRHENASKFKCSIGECIKTFPTSMMLEFHLLKHHTNHTPYICHHCSRGFFRTSDLSRHLKMSHMDTLKATGKDFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00909101;
90% Identity
iTF_00637972;
80% Identity
-