Ecan050275.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- Znf711
- Assembly
- GCA_949126895.1
- Location
- OX421485.1:17560411-17566523[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0011 0.17 14.1 1.5 2 23 115 137 114 137 0.93 2 27 0.0075 1.2 11.5 3.3 1 23 140 163 140 163 0.94 3 27 0.011 1.7 11.0 1.2 1 23 169 192 169 192 0.94 4 27 0.015 2.3 10.5 2.0 2 23 200 222 199 222 0.93 5 27 8 1.2e+03 1.9 0.3 1 23 227 249 227 249 0.83 6 27 1.8e-07 2.8e-05 26.0 1.0 1 23 255 277 255 277 0.96 7 27 0.022 3.5 10.0 1.6 1 23 344 366 344 366 0.99 8 27 0.071 11 8.4 0.0 2 23 392 414 391 414 0.92 9 27 0.015 2.3 10.6 0.2 2 23 437 459 436 459 0.95 10 27 0.00011 0.018 17.2 0.1 3 23 468 489 467 489 0.98 11 27 0.00027 0.042 16.0 1.8 2 23 495 517 494 517 0.95 12 27 0.00047 0.074 15.2 0.7 1 23 522 545 522 545 0.98 13 27 0.12 18 7.7 0.9 1 23 551 574 551 574 0.83 14 27 0.035 5.5 9.3 0.5 1 23 580 602 580 602 0.96 15 27 0.58 91 5.5 1.0 1 23 614 637 614 637 0.93 16 27 0.00018 0.029 16.5 1.4 2 23 645 667 644 667 0.97 17 27 6 9.4e+02 2.3 0.2 1 23 672 694 672 694 0.86 18 27 5.4e-05 0.0085 18.2 2.7 1 23 700 722 700 722 0.96 19 27 0.37 58 6.1 0.5 1 23 792 814 792 814 0.96 20 27 0.14 22 7.4 0.0 2 23 840 862 839 862 0.92 21 27 0.6 93 5.5 0.3 3 23 886 907 884 907 0.93 22 27 0.00025 0.039 16.1 0.6 3 23 915 936 914 936 0.98 23 27 2.2e-05 0.0034 19.4 1.1 3 23 943 964 942 964 0.97 24 27 0.072 11 8.4 2.9 1 23 970 993 970 993 0.97 25 27 0.0012 0.19 13.9 2.2 2 23 1000 1022 999 1022 0.95 26 27 0.044 6.9 9.0 1.2 1 23 1028 1050 1028 1050 0.95 27 27 0.022 3.5 10.0 0.7 1 23 1056 1079 1056 1079 0.89
Sequence Information
- Coding Sequence
- ATGAGGGACTGCGAGATACTGAAAGAACACACCCAAAAACATACAGTAGATTTAGATGCTTTCATCCCCAAAAGAATAATCTCCAAAGATGTGCCTATTAAAATCGATATCACTGGATTAGGCTGCAAAGTTTGCCCAAATACTCAGCTCAAAGACCTAGAAGAATTAATCTCCCATATCTTATTCGTTCACAATGAAGAATATGATACTAATGTCGGTGTATGCGTGTTCCCTTTTGTCCTGAACAAAGATATAATGCAGTGTGTTTTATGTCTTAACCAGTACGATAATTTCACATCTATGATTGGACATATGCATAAAGAACACGTCAGTCATTCATGCGTCTGCCAAATCTGCGGTTTGAGCTTCATGACTCAAATTCGTCTTAAAAGACACATCAGTAACAGTCATATCGGATATAGATGTTCCGTTTGCGGTAAAATGTTTAACGCCTCCCACCGTTTGGATAAACACAAGCAACAATTTCATGGGTACAGGAAATCTCATCAATGCAATCTGTGTAGTGCTAATTTTGATAACTCGTACCAGATGAAGGTTCATCTAGGAAAAATCCACAACGTAGAAAAGTATAGGATAAAATGTGAACACTGTACGAAAGTTTGTACGACAAAAGGTGCAATGTTACTACACGTTCAAGCGCAGCATTCAGATCTTAAGTATGAATGCGACTTATGTGATTACAAGGCTGGGATTAAATGGCTGATAACACTGCACAAGAAAAAACACTATGGGGAGAAAGAATATCTGTGCAGCATATGTGAGAAACAGTTTCGCAGGTCGAGTAACCTTAGAGCTCACATGAAGGTGCATTCTGAAGAACCTAGAGGTGGCCAGAAAGCGAAGGCATCCAGTACCAATGTATCCATTGAAGACGATTTTATAGATCGCGTAGAGTCAACTAGCGAACCTACTTCGTCAGCAATAGAAAAGCGTAATAATATGATAAATAACGTGATAGAAATCCTTATAAAGTCCACAATTATGCCATTTCGGTGGTTGAGAAGTTCTTACAGATGTTTTTACTGCTACGATATTTTTCAACAAGTGTCGGAACTGAAGAATCATCAAGAAACACACACAGGAGATCTGATAAAGAAACAAGCTATGAGCAAATATTTGGAGCAACTAGTTTTCGTCGACGTATCTAACCTTTCGTGTAAATTGTGCCCAGAAAAAGTCACAGATCTATATGATCTAGTTGATCACTTAGTTGTAGAACATGAAGTCGCATACAATAAAGATGTTGAAAATTTTTTGGTACCCTTCCAGCTGGATAATTTGTCTGTTAGTTGCGTGACGTGCGGGGCGAGTTTTTATTCATTTGCTTCTTTATTATCCCATACCAATAAAGATCACAAGGATATTTCAGCGCAAATTCTGTGCGATATTTGTGGACAGGAATACAGGAATGCTGGATTATTGAGTCGTCATCTCAAAACAGTTCACGATAACACTGGTGTTGTATGTCATAAGTGTGGCGAAAAATTCAAAAACGCGATTAGATTGAAAACGCATCAAAAGAATGTACATTTGGATAAAACGTACAAATGTTCGATTTGCTCAGAGGTTTTTAAAAGCGGTAACCTGAGAACCCGGCATATGCTCACTGAACATAAGATCGGCAAAGAATTTAAATGCCCGTATTGTCCAAAGACGACCCCTTTTCGAAATATAATCAAAAGTCATTTGAGGGACAGGCATTTGAATGTAGGGAACCATATTTGTGAAGTGTGCGGCTGGAAAGCTGCTACCTACTATAGATTGATGGTCCACAGGAATAAGCATGGTGGAGATAAGCCCCAGGGGTACACGAAACCTCATCAATGCAAGATGTGCGACGCTATTCTAGACAATGTACATCAGATGAAGGTTCATTTAGGGAAAGTGCACAATGTAGAAAAATACAGGATTAAATGTGAACACTGTGCAAAAGTATCCACAACCAAAAGTGAAATGATTAGGCACATTCAAACGCAGCATTCAGACTTGAAGTACGAATGCGATTTATGTGATTACAAGGCTGGAATTAGGTGGCTAATTACTCTGCACAAGAGAAAGCACAAAGGGGTGAAGGAATATTTATGCAGCATATGCGAGAAACCGTTTCACAAGTCAAATAATCTGAAAGTCCATATGAAGCGGCATTCTGGGTTTCCTGGAGAACATAGAGGTGGCCAGAAACAGAAGGAACCCAGTACCAATGTATCAGCTGAAGATGATTTTATCGATCGTGTGCAGTCTACAAGCAAAACCGTTTTAACACCGAAAGAAAAACGTagtataatgagaaataatGTAGTACAAGTCCTCATAAAGTCCACTGTTATGCCATTTCGGTGGCTGAAAAGTTCTTACAGATGTTTTTATTGCTACGACATTTTCCAAGAAGCCACGGATTTGAAGAATCATCAAGCAGCACACACAGGGGATCAGATAAAGACACAAGCCATGAGCAACTATTGGGAACCTGTAGTTTATGTCGACATATCCAATGTATCGTGCAAGTTGTGTCCAGAAAAAATTACGGACCTGTATGATCTGATTGACCATTTAATTGCAAAACATGAAgtcgtgtacaataaagatgttGGAATTTGTATGGTGGCATTCAAACTAGACAATTTCTCTGTCAGTTGTTTGGCTTGCGGTGCAAGTTTTTACTCATTTGGCCCTTTACTGCACCATACAAATAAAGATCACAAGGGTACTTCAGCTATTCTATGCGAGGTTTGTGGACAGCATTTCAAAGATGCAACATTATTGCGTCTTCATGTAAAAACGGTTCACGAAAACACTGGACTTTTATGTCCTGAATGTGGCGAAAAGTTTGAAACAAGGTCTAAGCTCAAAACGCATCAGAAGAACCAACACGATTTAGATAAAAAGTACAAATGCTTGGTGTGCACCCAGGTCTTTCAAAGCCACTACAAAAGATCACGACACATGGCCTCTGAACATAAAACCCGTCAAGAAATCAAATGCCTGCATTGCCCAAAGACTTTTGTCTTTCGAAGTATGATGATGACGCATTTAAGAGATACGCATTTAAAAGTTCGAAACCACATTTGTGGGGTGTGTGGGTGGAGGGCTTTTAACAGTAATAGACTGAAGAACCACATGTACAAGCATAGTGGGGAGAAGAACTTTAAGTGCGAGGCTTGTGATAAAGCGTTTACAACTAAAAAGATTATGAGAGCGCATTTTGCAAGGATGCACAAGAGTCTACAAGCGCCTATCATGCATTATGAGCATCCTTATGTTACACAATAG
- Protein Sequence
- MRDCEILKEHTQKHTVDLDAFIPKRIISKDVPIKIDITGLGCKVCPNTQLKDLEELISHILFVHNEEYDTNVGVCVFPFVLNKDIMQCVLCLNQYDNFTSMIGHMHKEHVSHSCVCQICGLSFMTQIRLKRHISNSHIGYRCSVCGKMFNASHRLDKHKQQFHGYRKSHQCNLCSANFDNSYQMKVHLGKIHNVEKYRIKCEHCTKVCTTKGAMLLHVQAQHSDLKYECDLCDYKAGIKWLITLHKKKHYGEKEYLCSICEKQFRRSSNLRAHMKVHSEEPRGGQKAKASSTNVSIEDDFIDRVESTSEPTSSAIEKRNNMINNVIEILIKSTIMPFRWLRSSYRCFYCYDIFQQVSELKNHQETHTGDLIKKQAMSKYLEQLVFVDVSNLSCKLCPEKVTDLYDLVDHLVVEHEVAYNKDVENFLVPFQLDNLSVSCVTCGASFYSFASLLSHTNKDHKDISAQILCDICGQEYRNAGLLSRHLKTVHDNTGVVCHKCGEKFKNAIRLKTHQKNVHLDKTYKCSICSEVFKSGNLRTRHMLTEHKIGKEFKCPYCPKTTPFRNIIKSHLRDRHLNVGNHICEVCGWKAATYYRLMVHRNKHGGDKPQGYTKPHQCKMCDAILDNVHQMKVHLGKVHNVEKYRIKCEHCAKVSTTKSEMIRHIQTQHSDLKYECDLCDYKAGIRWLITLHKRKHKGVKEYLCSICEKPFHKSNNLKVHMKRHSGFPGEHRGGQKQKEPSTNVSAEDDFIDRVQSTSKTVLTPKEKRSIMRNNVVQVLIKSTVMPFRWLKSSYRCFYCYDIFQEATDLKNHQAAHTGDQIKTQAMSNYWEPVVYVDISNVSCKLCPEKITDLYDLIDHLIAKHEVVYNKDVGICMVAFKLDNFSVSCLACGASFYSFGPLLHHTNKDHKGTSAILCEVCGQHFKDATLLRLHVKTVHENTGLLCPECGEKFETRSKLKTHQKNQHDLDKKYKCLVCTQVFQSHYKRSRHMASEHKTRQEIKCLHCPKTFVFRSMMMTHLRDTHLKVRNHICGVCGWRAFNSNRLKNHMYKHSGEKNFKCEACDKAFTTKKIMRAHFARMHKSLQAPIMHYEHPYVTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -