Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421490.1:10680426-10685640[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.8e-07 6e-05 25.0 0.5 1 23 161 183 161 183 0.98

2 14 0.0065 1 11.6 1.6 1 23 189 212 189 212 0.94

3 14 3.5e-07 5.4e-05 25.1 0.6 1 23 218 240 218 240 0.98

4 14 8.6e-05 0.013 17.6 4.8 1 23 245 267 245 267 0.99

5 14 8.9e-06 0.0014 20.7 3.7 1 23 273 295 273 295 0.99

6 14 8e-07 0.00013 24.0 1.1 1 23 301 324 301 324 0.95

7 14 5.1e-05 0.0079 18.3 2.9 1 23 330 352 330 352 0.97

8 14 9.6e-06 0.0015 20.6 0.8 1 23 358 380 358 380 0.98

9 14 4.9e-05 0.0077 18.3 2.1 1 23 386 408 386 408 0.99

10 14 8.4e-08 1.3e-05 27.0 0.7 1 23 414 436 414 436 0.98

11 14 1.4e-06 0.00023 23.1 3.7 1 23 442 464 442 464 0.98

12 14 0.13 21 7.5 3.0 1 23 470 489 470 489 0.94

13 14 8.8e-07 0.00014 23.8 1.2 1 23 495 517 495 517 0.98

14 14 0.00045 0.071 15.3 6.1 1 23 523 545 523 545 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.8e-07	6e-05	25.0	0.5	1	23	161	183	161	183	0.98
2	14	0.0065	1	11.6	1.6	1	23	189	212	189	212	0.94
3	14	3.5e-07	5.4e-05	25.1	0.6	1	23	218	240	218	240	0.98
4	14	8.6e-05	0.013	17.6	4.8	1	23	245	267	245	267	0.99
5	14	8.9e-06	0.0014	20.7	3.7	1	23	273	295	273	295	0.99
6	14	8e-07	0.00013	24.0	1.1	1	23	301	324	301	324	0.95
7	14	5.1e-05	0.0079	18.3	2.9	1	23	330	352	330	352	0.97
8	14	9.6e-06	0.0015	20.6	0.8	1	23	358	380	358	380	0.98
9	14	4.9e-05	0.0077	18.3	2.1	1	23	386	408	386	408	0.99
10	14	8.4e-08	1.3e-05	27.0	0.7	1	23	414	436	414	436	0.98
11	14	1.4e-06	0.00023	23.1	3.7	1	23	442	464	442	464	0.98
12	14	0.13	21	7.5	3.0	1	23	470	489	470	489	0.94
13	14	8.8e-07	0.00014	23.8	1.2	1	23	495	517	495	517	0.98
14	14	0.00045	0.071	15.3	6.1	1	23	523	545	523	545	0.98

Sequence Information

Coding Sequence: atgtcgTTTACGTGGAATATAAACGATTTGTGTCGCTGCTGCCATGTTCAAAGCAGTTTTAAGAGTGAAAATGTTGAACAAGATTTCTGTATGCTGTTAAAAGATACATTTGATGTCattGTAACTCCCATCCCGCTAGACTCCAATGTGTCCTACAATATATGTGAGGTATGTGAACCTCGGCTCAGAGATGCTGCCTTGTTCAAGAAACAAGTGTTATCCTGCGAAGATAGGCTGAAACAatatctgtataagaattttgaaatcaaagAAGTCAAACTTCAGCATTTGGACAAGTTTCTACAACCAGAAGAAGATGACCAACCATTGTCGATACTACGGAGGTCTAAGGAGTTCTCGGAGTATGCGGATCAGCCAGGACTGCTTCAAGACCCTGGTGTGGAAGATGTGGGTTGGGAAGGTTCACCGGTTTTCGGTGAGGACGAAACACCAAAAGGAAAAGAAACTAAAGCAAAGAAGTACTCCTGCGAGATTTGTCAAAAGAAATTCTCTTATAACGGGTCCTTGGAGGTCCATATGAAGGTCCATAATGGTGAGAAATCTTTCCCCTGCCATCTTTGTGGTACAGCACACACGGATAACAGGGAACTGACGAAACATATTACAGAAATGCATATCGTGGACGACAAATACCCTTGTAACGTATGCGATAAAGTTTTTGAGAAAGCTCGTATGCTAAAAAAGCATATTAAAACACATTATAACGAAAAATTTAAATGCACAGAATGTCATAAAGAATTCCTAAGGAAGAAAGGCTTGAAAGAACATATGAAAACACATACAGGCGAACGGAAGTACACTTGTGAAGTCTGTAATAAATCTTTTGGACACAATCAGACGTTAAAATCTCATATGTTTACGCATACAGGGGAAAGACCTTATGTCTGCGATGTGTGTGGGAGGAGGTTTCCTCAAAGAACACATCTTAAAAGGCATATCTTTATCATACATGCAGGAATAAAACCGCATAGCTGCAGTGTTTGTAAAAAGCAGTTTTCCAGTAAAAGTTATTTGGCTATTCATGAAAGGCAACATACAGGGGAGAGACCATATTCTTGTGAGATTTGTAAGAAAGATTTTACAGCATATACTACTCTGAAAGTACATATGCGTGTACATACAGGTTTTAAACCATATACATGTTCATTCTGTGATAGGCAGTTCGCACAAATGGCTAGTTTTAAGCTCCATCAACGAACACATACAGGGGAGAGACCGTTTTCTtgcaaaatttgtaaaaaaccATTCTCAGATAAtggttatttaaaaattcatatgCGTGTACATTCTGGGGAGAAGCCATTTACTTGTGAGATATGTAAAAGATGTTTCAGAGAAACGGGACAGTTGAAAAGACATATGCGAGTTCATACTGGTGTGAAACCGTATACATGTAAAGTATGTAATAAACAAATTGGGAATTTATCGAAGCATATGAGGGTACATTCTGAACAAAGGCCTTTTAGCTGTAGCGTTTGTAATAAGCAGTTTTCCATTAATGGCAATCTAAAGTTACATATGAGGACTCATACAGGGGAGAGACCATTTAGTTGTGATCTATGCAATTGTCAATTTACTCAGAGTAGTGGTTTAAAGAGACATAGGTGTATCCATGTTGGCAAAAGTGATGGTTGA
Protein Sequence: MSFTWNINDLCRCCHVQSSFKSENVEQDFCMLLKDTFDVIVTPIPLDSNVSYNICEVCEPRLRDAALFKKQVLSCEDRLKQYLYKNFEIKEVKLQHLDKFLQPEEDDQPLSILRRSKEFSEYADQPGLLQDPGVEDVGWEGSPVFGEDETPKGKETKAKKYSCEICQKKFSYNGSLEVHMKVHNGEKSFPCHLCGTAHTDNRELTKHITEMHIVDDKYPCNVCDKVFEKARMLKKHIKTHYNEKFKCTECHKEFLRKKGLKEHMKTHTGERKYTCEVCNKSFGHNQTLKSHMFTHTGERPYVCDVCGRRFPQRTHLKRHIFIIHAGIKPHSCSVCKKQFSSKSYLAIHERQHTGERPYSCEICKKDFTAYTTLKVHMRVHTGFKPYTCSFCDRQFAQMASFKLHQRTHTGERPFSCKICKKPFSDNGYLKIHMRVHSGEKPFTCEICKRCFRETGQLKRHMRVHTGVKPYTCKVCNKQIGNLSKHMRVHSEQRPFSCSVCNKQFSINGNLKLHMRTHTGERPFSCDLCNCQFTQSSGLKRHRCIHVGKSDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707185;
90% Identity: -
80% Identity: -