Ecan052726.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema caniola
Gene Symbol
-
Assembly
GCA_949126895.1
Location
OX421487.1:12754257-12756527[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.00015 0.023 16.8 3.2 2 23 106 128 105 128 0.97
2 21 1.8e-05 0.0029 19.7 4.6 1 23 134 156 134 156 0.98
3 21 0.00023 0.036 16.2 1.7 1 23 160 182 160 182 0.99
4 21 1.2e-05 0.0019 20.3 2.4 1 23 188 211 188 211 0.95
5 21 0.065 10 8.5 2.5 1 21 217 237 217 239 0.95
6 21 4.9e-05 0.0077 18.3 0.6 1 21 278 298 278 299 0.94
7 21 0.00028 0.044 16.0 1.8 1 23 318 340 318 340 0.99
8 21 0.0018 0.28 13.4 0.6 1 23 346 368 346 368 0.98
9 21 1.5e-05 0.0024 19.9 1.4 2 23 375 396 374 396 0.95
10 21 0.00058 0.09 15.0 2.1 1 23 402 425 402 425 0.95
11 21 1.1e-07 1.8e-05 26.6 0.6 1 23 431 453 431 453 0.99
12 21 0.0002 0.031 16.4 2.4 1 23 457 479 457 479 0.99
13 21 0.0054 0.84 11.9 3.7 1 20 485 504 485 508 0.86
14 21 4.7e-07 7.4e-05 24.7 0.3 1 23 514 536 514 536 0.99
15 21 0.00011 0.016 17.3 2.3 1 23 564 586 564 586 0.97
16 21 3.5e-06 0.00054 22.0 0.6 1 23 591 613 591 613 0.99
17 21 7.2e-06 0.0011 21.0 4.5 1 23 619 641 619 641 0.99
18 21 5.9e-06 0.00093 21.2 2.1 1 23 647 669 647 669 0.98
19 21 0.00045 0.07 15.3 1.6 1 21 675 695 675 696 0.95
20 21 0.15 23 7.4 4.2 1 19 703 721 703 725 0.91
21 21 0.0046 0.72 12.1 1.5 1 23 731 754 731 754 0.97

Sequence Information

Coding Sequence
ATGACAACGCCAGCAGAGCACAAAGAAGGAATAATATTGAAACATGCCGTGGTCAGGTTAGAGAGACTCGGATGGGAGGTCGTCAAAGCTGCGCATTTGCGCAACACCAGTGGATTGGACGTCGAAGAGCGAGCTGTACAAGGAACTGTTGTTGATGACGATGATTCGGCAGATGACTCCAGTCGCGATAGCCTTGGTGTTATCCGTGAAGCTAAGAGCGAAGAGAGTATTGACGCAAGATGGAACTCAAGAAAAACTCGCGGTCAAAGTAATTTGGGAAAACATTTAGTTACCCGCATTACAGAATATAATAATCAGTGTGATGTATGCAAGAAAACCTACACGACACAGCACCGCTTGCGAGAACATATCAAGCGCGTGCACATCGCGATGGAACAACATCAGTGCAAAGTATgtaagaaatatttcaaaagaaAAGATACTTTGAAAGGTCATATGAATATACACACTTCCGCGTATCAATGTGaagtgtgtaagaaatgtttgaCTTCACAAATTGAGTTGGGTTACCATATGCGCTTACACACTAATATAAAGCCATTCCAATGTGAAGTCTGCAAAATGTGTTTCAGAAGAAAAGATGCTTTAAAACGTCATAATATGGTTGTGCACAGTGGCGAGAGACCATATCAATGTTCTTTATGTGAAAAAGGCTTTATTAAACGACGTCCTTTCGATGTGCATATGCGCTGTCACAGAGGGCAGGCAAACAAACCTTTTGAGTGTAAAGTATGTAATGGATACTTTAACTATAAGCACAAGCACTCTGATTCGAACTTACAACAAGATGCAGGTAATGCTGAGAAACGGTATCAGTGCGATGACTGTGGGCACAGTTATAGTAACAAAGGAAGCCTCGCTAGTCACAAACTCAAACCATGTTTTGGTAAAAGACCACAATCGCGATTGCCCCCTGTCTTCAGAAATCTATATCAGTGTAAGTTTTGTGAAGAAAAATTCATTCTTAAAAGTTCATATGAAAATCATGTTCGCTCTCATACGGGGGAAAAACGTTATTCGTGTGATATTTGTAAAAAAGGTTTTAATTGGAAGTCCGTGTGGAAAAGTCACATGCTTACACACACTGGAGAGATACGGGTCAGTTGTAATCAATGTGGTAAAACATTTCGCGATGAAAGGAATTTGAAAATACATAAATTTAGCCACAATACTGAAAATAATTATCAATGTGATATATGTAAGAAAACCTTCAGGTCAAAGCTGCACATTGGTTATCACATAAGGGGCATGCACAACGCGGTGAAACAATATCAATGCGACATATGTCAGAAAGTTTTCAAGGGGAAAAGTGCTTTGAAAACTCATATGAACATACACACAGCCACATATCAATGTGaagtgtgtaagaaatgtttgaGTTCACAGTTTCAGTTGGATGGCCATATGCGCTTGCACACCAACATAACTCCATTCCAATGTGAAGTCTGCAAAAAGTGTTTCAGAAGAGAAGACGCTTTAAAATGTCATAATATGGCCGCGCACACTGGCGAGAGACCATATAAATGTTCTATATGTGATAAAGGCTTTATTAAACGAGGTCCTTTAAATGCTCATATGCGCACACACACTGGAGACAAACCGTTTAAATGTGATGTGTGTAACGGATACTTCAGCTATAAGCACCAGCACCAAAATGATTTAAAGTTATATCAATGTAAAGTGTGTAATAGACCCTTCAAACGCGAGAGTTTACGTACGCACATGAAGATGAAGCACGGGGATCAAATATATCAATGTGATGTATGTCAGAAAGGTTTTAGTTATAAGTATCCATTATTAATCCACATGCGTAGCCATACTGGGGAAAAACCATTTCAATGTGATATGTGTAAGACGTGTTTTGCTAAGAAATCAAGCTTAAGGGAACACATACGTAAACACCTAGGTGATAAATCTTATGAATGTACTATTTGCAAGAAGTTTTTTATGCGGCCCAGTAAGTTCAAACAGCATATGTTAATACACACTGGTGAAAAACCACATCAGTGTGATGTATGTGGAAGAAAGTTTCGTCTTAAATATAGTCTGAATGGACATATTTGTGTACGTAATGTAGCTCATTTATACCAATGTAAGGAGTGTAATAGACTGTTCAAGAAAGAGTATGCTTATAAAATGCATTGTTTATTGCATACAACTGATGAACGACATCAGTGTGATGTATGTAAGAGGCAGTTCGCTCTGAAGATTTCAGTTATTAATCATATTCGTAAAAGGCACGCTTTTTAG
Protein Sequence
MTTPAEHKEGIILKHAVVRLERLGWEVVKAAHLRNTSGLDVEERAVQGTVVDDDDSADDSSRDSLGVIREAKSEESIDARWNSRKTRGQSNLGKHLVTRITEYNNQCDVCKKTYTTQHRLREHIKRVHIAMEQHQCKVCKKYFKRKDTLKGHMNIHTSAYQCEVCKKCLTSQIELGYHMRLHTNIKPFQCEVCKMCFRRKDALKRHNMVVHSGERPYQCSLCEKGFIKRRPFDVHMRCHRGQANKPFECKVCNGYFNYKHKHSDSNLQQDAGNAEKRYQCDDCGHSYSNKGSLASHKLKPCFGKRPQSRLPPVFRNLYQCKFCEEKFILKSSYENHVRSHTGEKRYSCDICKKGFNWKSVWKSHMLTHTGEIRVSCNQCGKTFRDERNLKIHKFSHNTENNYQCDICKKTFRSKLHIGYHIRGMHNAVKQYQCDICQKVFKGKSALKTHMNIHTATYQCEVCKKCLSSQFQLDGHMRLHTNITPFQCEVCKKCFRREDALKCHNMAAHTGERPYKCSICDKGFIKRGPLNAHMRTHTGDKPFKCDVCNGYFSYKHQHQNDLKLYQCKVCNRPFKRESLRTHMKMKHGDQIYQCDVCQKGFSYKYPLLIHMRSHTGEKPFQCDMCKTCFAKKSSLREHIRKHLGDKSYECTICKKFFMRPSKFKQHMLIHTGEKPHQCDVCGRKFRLKYSLNGHICVRNVAHLYQCKECNRLFKKEYAYKMHCLLHTTDERHQCDVCKRQFALKISVINHIRKRHAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-