Basic Information

Gene Symbol
-
Assembly
GCA_949126895.1
Location
OX421484.1:8722814-8725327[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.4 1.1e+04 -1.7 0.0 22 33 283 295 280 299 0.79
2 5 2.1e-09 6.7e-06 27.8 0.3 1 45 314 360 314 361 0.94
3 5 1.9e-06 0.0061 18.4 0.1 2 44 368 414 367 416 0.95
4 5 2.4e-10 7.8e-07 30.8 0.0 1 43 420 462 420 464 0.97
5 5 5.1e-05 0.17 13.8 0.0 3 45 472 516 470 517 0.94

Sequence Information

Coding Sequence
ATGGCGTGGGTAGTGCAATCGGAAATAGTTTACGACAGTGACAATGACGATGAGAATGAGATAAGACAGCTCGATGCAGTGTTAGAAGAAGCTGAAATTGAGGTTTGTGATACCGGTTTGCCTATGTCACCGAGATGGGGCAACGCCAGTCCTGCTCAATGCATGGCCTCGCCGCGTCCCGCAGTGTCGTCGTACTCGGCCTCCTTATTAGAAAACTCGGCTTCAACACAAACTACCACGATCAATTCAGTTGAAACTTCAGGTAGGAGTTACTCAAGTTCCAGCTCACAGACTTCGTCTAGCGCAAATCTATTGCATTCTAATCCACAAATACAGGAACTCCATAATATAGATTCTTTATTGGCGCTTAACAAAATATACGAGGATAAATTACGAAGTCTAGAAAGAATTTTGGGGGTACGTCTAAAAGAATGCCGTGCTAAACTAGGACAAATCCAAAAGAGTCAGTTACAACCTGACAAAACGGAAGTTTTCCGTTATATCAATTGTGGCAGGCCATACTTCAGAGACCAACACAACAATCCTGCACCTGATAATGAAGATACTATAATGGCAAAAGCTCAGATGTACGATTTCTCTTTAGTTACATCAGTACCTGGATGGACAGTTAGAGATAAAACTCATTTCACTAATGTGATGACACAAATATCACTAGAGATACGGAAAGACGATTATAACAGTCAAATAAGTAAGTTAAAAAGCTCTACACCAAATAATAAAAAGGCAATGTTAGAAAAAGAAATCAACAGGCTTAAAAAAGAAAGGAACAGTTTAAATGCAAAAATGCCTTTTGCACAATTAGCTCTACCTTTAGATCAGGAATATGATTGGGACTTGTTGGCTCATAAGCTGAACAAGAGACATACACCTCATGAGTACAGGTGCCTGTGGAAATTATACTTTCATCCTTCAATAAACAAAAGTAATTGGAATAACAGTGAACACAACACTTTACAGCGACTCGCTATCGAACATCATTATCAGGATTGGGATGAGATTGCTAGAAAACTCGACACTGGCAGAACAGGCTATCAATGCTTTGTATATTATCGAACGAATATGACTAATAGTTGCATTGGTAAAAAATGGACTCATGAGGAAGTCACATATCTTAgaagattgattgattattttagAGAAGATATTTACATTCCATGGGGGAAAATTGCTGCGGCAATGGAAAACAGAACTAAAAttcaaatctataataaatatttacgccTTATTGAACAAAGAAAAGGGAGGTTTCTACCTGAAGAGGACTCGGTTATCCTTAATTGTGTGCAAAGATTTGGACCTAACTTTAAGAGAATCACCGAATTTCTCAGTCATAGGTCTATGGTTCAAATACGTGCAAGATATCAGGTGCTCAATAAAATGAGGATTTCAACTGTCTGGACAGTTGAAGATGACAAGAAACTTGTAGAGATAATGAGCAATCAGGATTCAAACATGACTTTTTCAGCTGCAACAAAGTATTTTCCAGGAAAAAACCGAATAAATATAAGGTCCAGATATATGACTCTGATAAAATGGATGAAAAGGCATCCTAACTCGGATCTAGAGTATGCACCAAGACGTGGTGCACGACGTCTGAATCATGGACAAGCAAGTGAAAACTTGAATCAAGCTATTGAaaacttgaaaaatatattgaacacAGAGGTTTCAGTGAAAAAAGACAGTAAGAAAATCACTAGAGATTCAGATGAAGTCTATATAGATGATGCTTTAGCCGCAAGTCTTGTTAATCAAGTGTTTAGAGGGGGACAGAAGAAATCTGCTGAGAATTCAATGTTGTCTAATGAAATGGTAATGACTAATAAGGAATTAAATGTAACAAACTTGATGAAGTGTCTCATATTCATGAATTCACATTTAAATGAAAACTTGTATAGAAATTCTCAGTATAGAACTGAATACCCCCAATTGACTGAAGTGAATGATGTTTGTTTAGTAAAGGTAAAGTCTTATTCTAggaaaaatcaaataaaaatgattaagaTGAGAAATAGCCCTGACATATGGGGGAATAATGCTTTAAATTCACGTACCTATGTTTTTCCACCACACTATGCAACTCTGACAGGGTGCAAGGCTTTGATGTCACATATTACTGCTTATAGTATGTATTATAATTCCATCAACCTTCATGTTCTTGTACGAAGGAATGCAGTGTTAAAGAACTACTTGGAGCAGCTGATGGAACGCTGCTACATACTATTTCTTTGGCCTATGCTCCTCTCCAATGAATCACCTAATGACTACCCTGGTGAAAAGTTAAGCAGAATGAATTCATTTTTTATCAGGCCGCCTGAACTTCCACAAGCCCCAGaagttacaataaaatttaGCAATTATAAAAAGTATAGAATTCGGGGTGATTCTAGTGTAATAGACCTGTCTGAAGGAGAAAAAAGGAACACGCAAATTAATGTACCTTTAACACTAAACAATGATATTGATGAATATATCAAAAGTTTAATGAAATAA
Protein Sequence
MAWVVQSEIVYDSDNDDENEIRQLDAVLEEAEIEVCDTGLPMSPRWGNASPAQCMASPRPAVSSYSASLLENSASTQTTTINSVETSGRSYSSSSSQTSSSANLLHSNPQIQELHNIDSLLALNKIYEDKLRSLERILGVRLKECRAKLGQIQKSQLQPDKTEVFRYINCGRPYFRDQHNNPAPDNEDTIMAKAQMYDFSLVTSVPGWTVRDKTHFTNVMTQISLEIRKDDYNSQISKLKSSTPNNKKAMLEKEINRLKKERNSLNAKMPFAQLALPLDQEYDWDLLAHKLNKRHTPHEYRCLWKLYFHPSINKSNWNNSEHNTLQRLAIEHHYQDWDEIARKLDTGRTGYQCFVYYRTNMTNSCIGKKWTHEEVTYLRRLIDYFREDIYIPWGKIAAAMENRTKIQIYNKYLRLIEQRKGRFLPEEDSVILNCVQRFGPNFKRITEFLSHRSMVQIRARYQVLNKMRISTVWTVEDDKKLVEIMSNQDSNMTFSAATKYFPGKNRINIRSRYMTLIKWMKRHPNSDLEYAPRRGARRLNHGQASENLNQAIENLKNILNTEVSVKKDSKKITRDSDEVYIDDALAASLVNQVFRGGQKKSAENSMLSNEMVMTNKELNVTNLMKCLIFMNSHLNENLYRNSQYRTEYPQLTEVNDVCLVKVKSYSRKNQIKMIKMRNSPDIWGNNALNSRTYVFPPHYATLTGCKALMSHITAYSMYYNSINLHVLVRRNAVLKNYLEQLMERCYILFLWPMLLSNESPNDYPGEKLSRMNSFFIRPPELPQAPEVTIKFSNYKKYRIRGDSSVIDLSEGEKRNTQINVPLTLNNDIDEYIKSLMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00637602; iTF_01166646;
90% Identity
-
80% Identity
-