Ecan052854.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421487.1:13974744-13975370[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-07 0.00018 22.9 0.0 1 39 8 45 8 49 0.85
Sequence Information
- Coding Sequence
- ATGGCACCAAAGAAACAGTATACTCCAGCTCAAATGGCACAAGCGCTGGATGCTGTAAAAAATGGGGAAAAGATCGCAGTCGCTGCATCACAGTATGGTGTTCCCCGTGTGAcgctttacaataaaatttcgGGGAAAAGTCCAACAGTTTGTTCCATGGGACCTCAAACAGTACTGAGCCAAAATGACGAGCAAATATTAGTGAAATGGTTGTTAAGTATGAGCGAGAGACATTTCCCAGTCAATAAGGAACTTCTAATGGAGAGCGTCCAAAAAATTATCACCGAACTAGGTAAGGTAAACCCCTTCACTAATAACAAACCGGGTAGAAAGTGGTTTACATCTTTTTTAAAACGGCACCCTAACCTCATTCTGAGAACAGCCCAAAACTTAACGAAGTCCAGGGACGATGTAACGGAAGAACAAATTCGAAGATGGTTTgaagaaatacaaaaatatattgaagGAAAAGGACTGAGTAATATCTTAGATGACTCGACTCGGGTTTTTAACGCCGATGAAAGTGCTTTTTTTTATCACCAAAAGCTGGACGAGTCTTATTCAAGCGAGGTGAAAAACATCTATATCAATTTTGTGGTGACGAAAAGGACAACCTCACAGTCTTAA
- Protein Sequence
- MAPKKQYTPAQMAQALDAVKNGEKIAVAASQYGVPRVTLYNKISGKSPTVCSMGPQTVLSQNDEQILVKWLLSMSERHFPVNKELLMESVQKIITELGKVNPFTNNKPGRKWFTSFLKRHPNLILRTAQNLTKSRDDVTEEQIRRWFEEIQKYIEGKGLSNILDDSTRVFNADESAFFYHQKLDESYSSEVKNIYINFVVTKRTTSQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00637586; iTF_00636341;
- 90% Identity
- iTF_00636341;
- 80% Identity
- -