Ecan045686.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421482.1:20849058-20851370[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-10 2.2e-07 32.2 0.0 2 36 9 42 8 48 0.93
Sequence Information
- Coding Sequence
- ATGATGTCAAGACAAACGTATCCTCCAGAGAAACTCTCTTCTGCCATGGAAGCCATACGAAATGGAATGCCGATAAGAGAGGCTAGTAGAACGTTTGGAGTTCCTCGAGGCACACTACAAGATCGGATTCCTCTACGTGTTCCTGAAGGTCCAAGAAAAATGGGTCCtgattcaattttaaataaagcAGAAGAAGCTGCACTGGTGGACTGGTGTGGAAAGTTAACAAAATGTGGGTTTCCTTTAAAGgttgataatttattaaatacagtCCAAGCATTAGTAAAGGCCGACGGAAGACCTAATCCTTTTGCAAATGATAGACCAGGAAGAAAATGGCTTAAAGCCTTTTTTCGAAGAAATCCTTCCTTATCTATGCGAACAGCTGAAGAAATTTCTAAGGGACGAGCAGTAATAACTGAAGAGTATATAAGGAAGTGGTTTCAAGGCTTGACAGAGTTTTTAAAAGCAAACGATGCTCTCGATATACTGGATGACCCTAAGAGAATATTTAATGGTGATGAAACCAGTTTCATGATTTGCCCAAAAACTGGAAAAGTGATTGCTCCTAGaggctataaaaatatttatcaaattgCCAAAGGAAGTGAAAAGGAAACAATTACTACTTTAGCGGTTTTTTCGGCAGACGGAGACATTTTACCACCATGCGTAGTATTTCCTTATGTAAAACCTCCTAAAGAAGTTGTTTCTAGTATGCCCGATGACTGGTTTCTTGGCAAATCTGATAGTGGCTGGATGAAAACCGACATATTCTATGACTATATTTCTGGAGGATTCAACAAATGGCTTGCAGATAACGATGTGCAAAAACCCGTCATACTCTTTGTTGACGGCCATAAGAGTCATTTGACAATGAAACTTAGCAAATTTTGTTATGATAACGATATCATACTTTATGCGCTACCACCCAACACCACGCACATGATGCAACCGGCTGACGTGAGTGTATTCAAACCTCTAAAATCCGAATGGAAGAATATCATCCATAAATGGTCATCTATACCAGACAACGCCAACAAATGTCTAACAAAGGTCACATTCTGTCCTCTATTAAACCAAGTGTTCCAAAAAGATAACCTAAAGGATACAATAAAAAACGGTTTTCGGAAATGTGGTCTTTATTCATTCGACCCTAATTCCGTTGATTACacaaaatgtgttcaaaataatGCGGAAAAATTAAAACGGAAGACGAGTCAATCACCcaggaaaaaattaaaaaacagagaCTATGACACAGCCCTTAAAGTAATCCGGCgtttaaataaagaattaacAGAGGAAAGGGTGGAGGTATCGGTAGTTTTAGAAGTAATTGAAACTGCAAAAAAAGCTCACGGAATTGACAACTCTGCTGTATCTGATACCTTAATGGATTCAAGAAATGTGAATATTACAACGGACATGAATATAAGTTTACCGTTACTGGGCGATAGTACCCTTTTAAACAACTTGGACTTATCGTATATAGAACTAGGAACTTACGAAATGAATGAATGCAATGATCTGATACCTGTAAATAATGACTATAATATTCAACCTGAACAAACGAACGATTTTAGTGAACTTAGGACTACTGACATGAATAAATGCAACGATTTGATACCCGGAAATGATGACTTGAATATTCGACCTGAACAACCACCCCAATTTACTGAACGTAGGATCTCCGCAAATGTTTCACCAGCATTGAAACAGATTCTAAAAATACCGTCTCCTATTAAAAAATCTGTCACCCCTAGAGTTATGAATCGAATTGGAGCAATATCATCTAAAGACTGGAGAGAATTTGAAAAGCAAAAAGAAGATGAAAAAGAGAAGAAGAAGGCTGATATCTTAGAAAGAAAGTTAAAAcgggaaaatataaaaaaggaaaaagcaGAAAAAATTGCAGCCAAACGCAGTAAAAAAGAAAGCGTTAGCACTAGTGAAGTAAATAAAAAGTGCACTAGGAAACGGAACATAAATCTTTCGCCTGTTTCATCCAACTTATCAGATAGTGATGCAGTTCCTATTTGCGAAACCCGACCCAAAAACAGTAAAAGAAAGTGTGGAAAAGAATCTAAAGTAAAGATTATTTCTAATCAACGTGTCTGCTTCCTTAACAAGGAGAATAATCCTTTGATATCTTCATCCAGTTCTCCAAGCACAAGTAAACACATTGTGTTAAAAGATTTTACTTTACCCAAACCAGCGTTAAGAACAAGTAAcaggaaaataacaaaacatttaaCAAATGACcgagaaataataaatttcttaAATACAAGTAGCGGTTCGGATGATTAG
- Protein Sequence
- MMSRQTYPPEKLSSAMEAIRNGMPIREASRTFGVPRGTLQDRIPLRVPEGPRKMGPDSILNKAEEAALVDWCGKLTKCGFPLKVDNLLNTVQALVKADGRPNPFANDRPGRKWLKAFFRRNPSLSMRTAEEISKGRAVITEEYIRKWFQGLTEFLKANDALDILDDPKRIFNGDETSFMICPKTGKVIAPRGYKNIYQIAKGSEKETITTLAVFSADGDILPPCVVFPYVKPPKEVVSSMPDDWFLGKSDSGWMKTDIFYDYISGGFNKWLADNDVQKPVILFVDGHKSHLTMKLSKFCYDNDIILYALPPNTTHMMQPADVSVFKPLKSEWKNIIHKWSSIPDNANKCLTKVTFCPLLNQVFQKDNLKDTIKNGFRKCGLYSFDPNSVDYTKCVQNNAEKLKRKTSQSPRKKLKNRDYDTALKVIRRLNKELTEERVEVSVVLEVIETAKKAHGIDNSAVSDTLMDSRNVNITTDMNISLPLLGDSTLLNNLDLSYIELGTYEMNECNDLIPVNNDYNIQPEQTNDFSELRTTDMNKCNDLIPGNDDLNIRPEQPPQFTERRISANVSPALKQILKIPSPIKKSVTPRVMNRIGAISSKDWREFEKQKEDEKEKKKADILERKLKRENIKKEKAEKIAAKRSKKESVSTSEVNKKCTRKRNINLSPVSSNLSDSDAVPICETRPKNSKRKCGKESKVKIISNQRVCFLNKENNPLISSSSSPSTSKHIVLKDFTLPKPALRTSNRKITKHLTNDREIINFLNTSSGSDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01245865; iTF_00985933;
- 90% Identity
- iTF_01245865;
- 80% Identity
- -