Ecan018616.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421465.1:23421188-23422348[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-10 1.9e-07 32.4 0.0 5 37 1 34 1 41 0.88
Sequence Information
- Coding Sequence
- ATGCAATCAGCAATTAAAGCCGTTCGCGAAGGTCGTTTAAAATTAAGAGAAGCAGGCCGACATTATGGTGTGCCACACAACACGCTTAGTAACAAATTAAAAGGGGTGGCACCTGAAGCAAGAAAGATGGGCCGTGCTACGTATTTGACTCCTAAAGAAGAAAAACTTTTGGTTTCATACCTTATAGCAAATGCAAAAAAAGGCATTCCATTAAAACGACAAACGTTAgtcgaaatagtaaaaaaaataattgatgaaGATGGACGCAAAACGCCGTTCAAATATAACCGCCCGGGGAGAAAGTGGATAGATTTATTTAAGAAGCGCCATCCGCAATTATCAGAAAAGAAGGCTGAGAGCATATCAACAGCTCGAGCAAATGTTTCAGAGGCTGATTTAAGACAATGGTCTGAGTCCCTTAAACAATATTTAGCGGAGGAACAAATGCTGGAAATTCTAAATGATCCTCAAAGAATATATAACGCAGATGAATCTGGATTTCAAACCTGTCCTAAGTCAGAAAGAGTATTAGGGCCTGTCGGAATGAAAAACTTTTTTGAGGTTAAATCTGGAAAAGAAAAAGAGCAGCTTACTGTCATGGCTTGCATAAACGCCGCTGGTCAAATAGTAGCACCCATGGTTGTTTATCCGTTCATTCGAATTTCGAAGGACATATCATGTAATGTCCCAACAGATTGGTCCATAGGAAGGTCGCCTAAAGGATGGATGACAGGCCCATTGTTCTATGAGTACATTGCAAATGTCTTCGATCCCTGGTTAAAATGTCAAAAGATAAAGAAACCCGTATTGCTTTTAGTTGACGGCCACCGCTCACATATGACAATGCAAGTATCCGAGTACTGCACAGAAAACCAAATACTCGTGCACGCGCTTTACCCTAACTCTACTCATATTAAACAGCCCGCAGACGTGTCACTGTTTAAGTGTTTGAAAAGTGGTTGGCAGAATACTGTTTTTGAGTACAAACAAAGCACTGGCAACAAACACATTACTCGCGCTGGATTTGCACCTCTGCTATACAAAGTATTTCAAGACAAAGTCACTCCAGAAATAATTGCAAACGGCTATAAGCGATGTGGGATCTACCCGTTTGATCCATCAGCAGTAGACTACAGTAAATGTATGGACAATGGACAATGA
- Protein Sequence
- MQSAIKAVREGRLKLREAGRHYGVPHNTLSNKLKGVAPEARKMGRATYLTPKEEKLLVSYLIANAKKGIPLKRQTLVEIVKKIIDEDGRKTPFKYNRPGRKWIDLFKKRHPQLSEKKAESISTARANVSEADLRQWSESLKQYLAEEQMLEILNDPQRIYNADESGFQTCPKSERVLGPVGMKNFFEVKSGKEKEQLTVMACINAAGQIVAPMVVYPFIRISKDISCNVPTDWSIGRSPKGWMTGPLFYEYIANVFDPWLKCQKIKKPVLLLVDGHRSHMTMQVSEYCTENQILVHALYPNSTHIKQPADVSLFKCLKSGWQNTVFEYKQSTGNKHITRAGFAPLLYKVFQDKVTPEIIANGYKRCGIYPFDPSAVDYSKCMDNGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01331404; iTF_00640227; iTF_00356122; iTF_00034652; iTF_01503796; iTF_00150430;
- 90% Identity
- -
- 80% Identity
- -