Basic Information

Insect: Eilema caniola
Gene Symbol: HARBI1
Assembly: GCA_949126895.1
Location: OX421461.1:4171483-4176774[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-10 4.4e-08 34.4 0.0 1 38 351 389 351 393 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-10	4.4e-08	34.4	0.0	1	38	351	389	351	393	0.93

Sequence Information

Coding Sequence: ATGTTTCCATTGCGCTGGCAATTGCTAGAAGCTGCCCACAACGTAGATCGTCGGCAGGAAGCACTCAGAAATCGCCGCCGAGCTCGTGCTAGTTTGAGGCGTAGCAACGTATTTGATATTCTGCCTGATGCggaatttattaaaacatttaggCTCACAAAAGGCCTTGTGAGAGAAATGGCTGAGGACATCAGCAACATTATTCCATCAGAGCAGAGAAATGATGGAATTTCTGTGATGATGAAGCTTCTGATAACCCTGTCCTTTTACGCGACAGGGTCTTATCAGACTTTGGTAGGCCAAAGTTCATTACACAATGTCTCACAGCCTACTGTATCAAAAGCTGTGAGGCAAGTCACGAGGGCACTCAATCATCcctctatattttataaatatattaggttCCCACTGGACCGCCAAGAGAGGAATGCCATAAAGACCAAATTCTATCAGAATTTTAAAATTCCTGGGGTTGTTGGGTGCATTGATGGCACACATATTTCTTTAATAAGACCTCATGTACATGAAGAGAGGTATTTTAATAGGAAAGGATATCATTCTTTGAATGCTATGAtaGTATGCGATTCTGAACTAAACATCTTATGTGTTGATGCCAGTATGCCTGGTGCAGCCCACGACTGCAGTGTTTGGCAGAGTAACCCACTCAGCAACCATTTAATGGCATTAGCTGCTCCTGGTGAAGACCACTCATTTTTATTAGgtGACAGTGGATACCCCTTGCGCAGGTGGCTTATGACTCctattttaaatacaatagaGGGAACCCCAGAGCACCATTACTATAACCTGCATGTGACTGCCCGCAATACTATTGAGCGCTGTATTGGTGTTCTAAAAGGAAGATTCAGatGTTTGCTTGCTGCACGAGCACTACACTATAATCCCACTACGGTAGGGGCAATAGTAAATGCATGTTGTGTTTTGCATAACATTGCGAACCGCGGCAGAATACCATTTGAAGCACTAACAACTGAGGAAGTTGCAGCGGAGAATTTTAGACAATATCTGggtaCTCGTACTCAAGAAGTGGATGAAGAGTCCATGAATTTAGCTGTCGATGATGTAATACAAGGACGGTTGTCGTATAGAAAAGCTGCGTTAAAATACAACATTAAAACATCAACATTGGAAAGCAGAGTCAAGAAATTTAAAGATAGGTCTAATGCCGATGGAGCTTCACGAACTTTTCATTCAAAATTCACCAGTTTACAAGTCTTCTCTATGGAAGAAGAGGCACGCTTAAATGACTATATTATTAATTGTTGCAAAATGCATTATGGGTTAACGATAACACAAATTCGAAAACTTGCTTACGAATACGCGAAAGCCTTAAATTTGAAATACCCAGCGAAATGGGATGAAAATCAAATGGCCGGCTTAGAGTGGATGCGTAAATATAGAGAACGAAACTCCAATCTAAGTCTACGAAAGCCTGAAAACACTAGCGCTGCTCGATCATTCGCGTTTAATAAAACTGCAGTCCAAGAATTCTATAATAATTTGTCTGATGTATTACAACGACATAATTTTGCTGCCGACAGAATATTCAACTTTGACGAAACGGGCGTGTCTACTGTTTTAGAGACTCCTAAAGTTTTGGCTCCTAAATCACAGAAACAAGTGGGACAGATCGTGTCAGCAGAAAGAGGGGAATTGGTAACATTTGGTGCTATTATTTCTGCCAGCGGAAATACTATCCCTCCGCTATTTGTATTTCCACGTGTGCACTACAAAGACCATTTTCTTGAAGGTGCTCCTGAAGGAAGCCTCGGAGCTGCTAGTAGAAGTGGGTGGATAAATGCAGACATATTTGTTTTAGTATTAAAGCACATTCAGAAACACACATTGAGTTCTAAACAGCATCCAATTTTACTGTTATGTGATAATCACGAAAGCCACATCAGCTTACAGGCTATAACATATGCTCGAGAGAATGGCATCATTTTTGTATCTTTTCCCCCGCACACAAGTCATCGATTGCAACCTTTAGACGTTGGAGTGTTCGGCCCATTCAAGGCAAAGTTGAAAATAGCGTTCAATAACTGGCATATGTCAAATTCTGGCAAAACTAtcaagtattataatattcctAAACTAATTAAACTTGCATATTTCGAATCTTTTACCgcaaaaaatattacaagtgGATTTGAAAAGCCAGGTATATGGCCGTTCAATGAAATGGCCTTCAGTGATGAAGATTTTGCTCCCATTAACGTGTATACTTCAAATAATTCGGTAAGTGTGCCCCTTAATGTCGCTCAAGAACCACAACCTTCCACTAGCGTGCCATTGACTGATATGAGTGAGCCAGATATTCGTGAGCAGTCACCTTCTTTGCTCCAAAATTCTCAAGACATTTTCACTGGAACTGGCGAACCTTCCACATCTGTGGCCAAGGCACAATCTGAACCGACTGCTTATCTTCCCATAACACCAGAAGTCATAAGACCTTATCCTACAGCTTCTAGAAACATAAACACCAATAAACGAAGAAATCCGGGAAAATCCCGTATATATACAGATACACCTGAAAAAAACGAACTAGAAGAGAGACATAAACAaaaagaattgaaaaaaatagaaaaggaACGGAAAGCCAGAGCCAAAACAGTGAAACGTAGTTTGAAGGAACTTAATTCAAGACAAAAGATAAAGAAAACCAAGAAAATAGAAAGTGATGAAGATTCAGAGGAATCTGAAGGATCTCAATTAAGCTTGCGGGAGAGTTCAACATCTCCACAAGATTTAGAAACGGACGAGGAGACTGAGGATCAGCTGAAGGTATCTTACCTTCGGAAGAAACCGGGTTTGTCATGGTTATTCTTTTTCCCTGATATCGAAGACATACACACTCTGTATATCAGCGATGTCGCCATGATCCTTCCTGATCCTCAACCACGAGCAGGCTGTACAGCTAGATTGGCTAGACTGTTTAGTTTCGcagttaatttaaataattataatgtacaaTAA
Protein Sequence: MFPLRWQLLEAAHNVDRRQEALRNRRRARASLRRSNVFDILPDAEFIKTFRLTKGLVREMAEDISNIIPSEQRNDGISVMMKLLITLSFYATGSYQTLVGQSSLHNVSQPTVSKAVRQVTRALNHPSIFYKYIRFPLDRQERNAIKTKFYQNFKIPGVVGCIDGTHISLIRPHVHEERYFNRKGYHSLNAMIVCDSELNILCVDASMPGAAHDCSVWQSNPLSNHLMALAAPGEDHSFLLGDSGYPLRRWLMTPILNTIEGTPEHHYYNLHVTARNTIERCIGVLKGRFRCLLAARALHYNPTTVGAIVNACCVLHNIANRGRIPFEALTTEEVAAENFRQYLGTRTQEVDEESMNLAVDDVIQGRLSYRKAALKYNIKTSTLESRVKKFKDRSNADGASRTFHSKFTSLQVFSMEEEARLNDYIINCCKMHYGLTITQIRKLAYEYAKALNLKYPAKWDENQMAGLEWMRKYRERNSNLSLRKPENTSAARSFAFNKTAVQEFYNNLSDVLQRHNFAADRIFNFDETGVSTVLETPKVLAPKSQKQVGQIVSAERGELVTFGAIISASGNTIPPLFVFPRVHYKDHFLEGAPEGSLGAASRSGWINADIFVLVLKHIQKHTLSSKQHPILLLCDNHESHISLQAITYARENGIIFVSFPPHTSHRLQPLDVGVFGPFKAKLKIAFNNWHMSNSGKTIKYYNIPKLIKLAYFESFTAKNITSGFEKPGIWPFNEMAFSDEDFAPINVYTSNNSVSVPLNVAQEPQPSTSVPLTDMSEPDIREQSPSLLQNSQDIFTGTGEPSTSVAKAQSEPTAYLPITPEVIRPYPTASRNINTNKRRNPGKSRIYTDTPEKNELEERHKQKELKKIEKERKARAKTVKRSLKELNSRQKIKKTKKIESDEDSEESEGSQLSLRESSTSPQDLETDEETEDQLKVSYLRKKPGLSWLFFFPDIEDIHTLYISDVAMILPDPQPRAGCTARLARLFSFAVNLNNYNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -