Ecan018501.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421465.1:22939156-22940910[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 4.1e-10 40.9 0.0 2 41 19 59 18 61 0.93
Sequence Information
- Coding Sequence
- ATGCCGATGACATACAAACGTAAGCTTGGTTCTAGACGATACTCGGACTATACTACCGAACAGCTTGAACTATGTTTACAAGCTATAAAGTCAGGACAAATGTCTCAGAGACGAGCAAGTGAACACTATAATATTCCCCGTCGAACTTTGGTATATAAGCTTAAAAAGGTTCATATGGGTATGCCAGGGCCGCCACCCACATTCACAAATGAAGAAGAGGTTGCTATCGCTACGCACATAGAGACAATGAGTATATATGGGTTCCCATTGACAGAGTATGATCTGAAAATTACTATTAAAACTTACCTAGACAAATGTGGGCGCActataaaaaagttcaaaaataacTTACCTGGAAGGGAGTgggtaaaacaatttttaaaaaggCATCAGCACCTTACCGTGCGTTTAGCGACAAATACAAAAAGGAGCCGGGCAGCATTAAGCAAAGATATTTTAGAAGaatatattacaaatttaaagCCTGTGCTTGAAAATGTGCCcccttcacatatattcaattatGACGAGACAAATCTCACAGACGACCCCGGACAACAAAAAGTTATTGTTCGTCGTGGCTGCAAGTACCCTGAAAAAATTTGCAACTCCTCTAAGGCTAGCACATCAATTATGTTTTGTGGGAGCGCAGCCGGGGAATTGATGCCGCCTTATGTGGTGTACAAATCTATAAAATTATGGAATACTTGGACTGAGAATGGCCCAAAGGGTTGCCATTACAGCAATTCACCATCTGGGTGGTTTGATACTCAAATATTCTCGGACTGGCTTGAAACCCTCATGATACCAAAACTGAAAAAAATGGAGGGCAAAAAAGTGTTGATTGGGGATAATTTAGCCTCCCATTTATCCATACATGTTTTGAAACTCTGTCGGGAGAATAACATAGCGTTTGTCTGTTTACCACCAAATAGTAGCCATATAACTCAACCATTAGATGTTGCTTTTTTCCGCCCGCTTAAGATAGAGTGGAGAAAAATTCTCACAGACTGGAAAGCTTCTGCAGAAGGTTCTAAAAATGCTACAGTACCAAAGCAAACTTTCCCGACACTATTAAAAACATTACTGGAAAATATAGAACCAAATATTGGGGAAAATTTAAAGAGCGGATTTCGAAAATGTGGTATTGCACCCTGCGATGTATCAGAGTTGCTGAAGAGAATACCAGGAGAAGGCGAAAGCGTAAACAATGAAGCCATGTCTTCTTTCATTGATATTTTAGAAAAGAAACTTAAGTCAATAACAGATTTGGCACCAAaaggaagaaaaaagaaatttgaaatACCGGCTGGGAAAAGTATCTGTCACGAATTAAATTTGGACTCGGACGAAGAAACTCCGACAACTTCCAGAATTGTTAATGATCGTGATTCTGATCACTATTCAGTACAGGATGAATCTGATGATAATGGTGGCTTTTTAGAACCAGATAGTGCCGAAGAATCTATAGCTGAACCAGAGAGATTGTCATGTTTCAAGACATTGCAACGTGAAAAAAATGCCTTTGTCGTCGTAAAATATGACAATGGACTATATCCTGGTATGATAatagattttgatgataaaGGTGCAACAGTGGACGCAATGTGTAGATCCTTGAAATCGTGGAAATGGCCACAAACGAAGGATGTGAATTTTTACGAATGGGACGATATTCTTGGGAGTATCGAGCCTCccaggaaaatatcgaaacgtGGATTTTTCAGTGTCAAAGAACTCGATGACTTCTACTAA
- Protein Sequence
- MPMTYKRKLGSRRYSDYTTEQLELCLQAIKSGQMSQRRASEHYNIPRRTLVYKLKKVHMGMPGPPPTFTNEEEVAIATHIETMSIYGFPLTEYDLKITIKTYLDKCGRTIKKFKNNLPGREWVKQFLKRHQHLTVRLATNTKRSRAALSKDILEEYITNLKPVLENVPPSHIFNYDETNLTDDPGQQKVIVRRGCKYPEKICNSSKASTSIMFCGSAAGELMPPYVVYKSIKLWNTWTENGPKGCHYSNSPSGWFDTQIFSDWLETLMIPKLKKMEGKKVLIGDNLASHLSIHVLKLCRENNIAFVCLPPNSSHITQPLDVAFFRPLKIEWRKILTDWKASAEGSKNATVPKQTFPTLLKTLLENIEPNIGENLKSGFRKCGIAPCDVSELLKRIPGEGESVNNEAMSSFIDILEKKLKSITDLAPKGRKKKFEIPAGKSICHELNLDSDEETPTTSRIVNDRDSDHYSVQDESDDNGGFLEPDSAEESIAEPERLSCFKTLQREKNAFVVVKYDNGLYPGMIIDFDDKGATVDAMCRSLKSWKWPQTKDVNFYEWDDILGSIEPPRKISKRGFFSVKELDDFY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01526947; iTF_01526948; iTF_01526949; iTF_01526950; iTF_01526951; iTF_01526952; iTF_01526953; iTF_01526954; iTF_00071312; iTF_00636208; iTF_01526995; iTF_00404636; iTF_00636316; iTF_01367630; iTF_01367629;
- 90% Identity
- iTF_01526947; iTF_01526948; iTF_01526949; iTF_01526950; iTF_01526951; iTF_01526952; iTF_01526953; iTF_01526954; iTF_00071312; iTF_00636208; iTF_01526995; iTF_00404636; iTF_00636316;
- 80% Identity
- -