Ecan031946.1
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- -
- Assembly
- GCA_949126895.1
- Location
- OX421473.1:19166286-19169238[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-09 2.6e-06 28.8 0.0 5 44 23 61 19 62 0.90 2 2 2.8e-13 9.8e-11 42.9 0.0 3 42 123 163 121 166 0.95
Sequence Information
- Coding Sequence
- ATGGAAGattctgtttttttattaactaaaaAGCAACATAAGCGCAAGCAATATACCTCTGCTCAGGTTGATGCTGCTCTCCGAGATATAAATGAAGGAACCACTATTTATCAAGCTTCAAAAAAATACGATATACCAGAGACTACTCTGCGAGAATTGAAGCATAATAAATATACCCAAGAAAGATGTGGAGCACCAACAGTTTTAACAAAAGATGAAGAAAATAAACTAATAGACTGGATTAACTGTCTAGTGAACTCAGGTTTCACAGTAACCAAAGATCAGTTGTTGGAATCAGTATCGATATTAGTTAATACCGAAGGTCGATCTAATCCTTTTAAAAACGGTTCAAAAAGATACACCATCGAAACTCTCCAAAAAGCTCTAGATGACATAAAAAGTGGGACTTTGTCAGTTAGTCAAGCCTCGAAGAAGTATGATATACCGAATCAGACGCTTCATGACAAAATAAAACAGAGGCATATCAAGCAGCAACTTCCAGGGGCACCAACTGTTCTAACACAAGATGAAGAGGCCTCAGTTAAAAAATGGATAATGTACATAACTGATATGGGTTTTcttgtaacaaaaaaaatgattaCCCAATCTGTAACAAAATTGGTGACTGGAGTGAACAGACCACTTAAATTTAGGATGGGTTTGCCTGGTCATTCTTGGTACACAGGTTTTATCAAAAGAAAGTCCATTCCGAACGAAAGAATTCGTAAAACTTTGAATATTAAACGACCCGACGTCACTGAAGAAGAAACAAGGGCGTGGTTTCAGCAGACTGCacaatatttcataaaaaataatatgattGGAGTATTAGAAGATCCATCCAGAATCTTTTATTACGATGAGTCAGCGTATTACATTGGTCCTAAAGGTCAAGCTGCTCAAACCAGAAAAGATGGAAAAcatgaatttaataaatttggttATGATGAAAAAGATAGTTTAACGTTAGCTTTAGGTGCATCTGCTGATGGGAAGTTAATGCCAACTCTAGCAATATTTCCTTGCGAGACGATACCTGATATAGAAAAATATCCAGAAACTTGGTCGTGCGGCAGAAGCGACAATAGGTGGATGACGTCAGATAATTTTTATGAATACATCAGCAATGTTTTTAATccaattttaattaatgaaaatatcaagAAACCTGTGGTTCTATTTTTGGATGGCCAAGTTGGCTACTTGTCTCTTCAAGTCACTGAATTTTGTAACGTTAATGGTATAATTTTAAAGGCATTACTACCTAGTTCTAATCACGTTACACATCCATTAGAtacattaatattttacaatttaaaggAAGCTTGGAAAACAGCTGTAGACTCTTGGCGAATGGACAAACGGAATGACAGACGTATGAAAAGAGAAGATTTTGCGCCAATACTTGATAAGTgtattaatgaaactttacaaccACGTAGTATACAATATGGGTACTGCCAAGCTGGCCTATATCCCTTTGATGAAAGTGCTATTGATTACCCAAAATTAAGTAGTTCATCTAAATGA
- Protein Sequence
- MEDSVFLLTKKQHKRKQYTSAQVDAALRDINEGTTIYQASKKYDIPETTLRELKHNKYTQERCGAPTVLTKDEENKLIDWINCLVNSGFTVTKDQLLESVSILVNTEGRSNPFKNGSKRYTIETLQKALDDIKSGTLSVSQASKKYDIPNQTLHDKIKQRHIKQQLPGAPTVLTQDEEASVKKWIMYITDMGFLVTKKMITQSVTKLVTGVNRPLKFRMGLPGHSWYTGFIKRKSIPNERIRKTLNIKRPDVTEEETRAWFQQTAQYFIKNNMIGVLEDPSRIFYYDESAYYIGPKGQAAQTRKDGKHEFNKFGYDEKDSLTLALGASADGKLMPTLAIFPCETIPDIEKYPETWSCGRSDNRWMTSDNFYEYISNVFNPILINENIKKPVVLFLDGQVGYLSLQVTEFCNVNGIILKALLPSSNHVTHPLDTLIFYNLKEAWKTAVDSWRMDKRNDRRMKREDFAPILDKCINETLQPRSIQYGYCQAGLYPFDESAIDYPKLSSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404660;
- 90% Identity
- -
- 80% Identity
- -