Basic Information

Gene Symbol
-
Assembly
GCA_949126895.1
Location
OX421461.1:3761271-3769999[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.2 2.5e+04 -2.5 0.0 2 18 21 37 20 51 0.72
2 2 6e-11 2.9e-07 32.5 0.0 21 88 106 175 84 176 0.77

Sequence Information

Coding Sequence
ATGGCCAAAATAGGCAACTTGACAGTAATAGGCATATATCGCCCTTTCTGTTTCAAAAATCCTAAAACATTCCTTGATGCTTTGTACGCATTGTTAACCACTACCAATTCGCGGAATATCATACTAACTGGAGACATAAACATCGACACATTAGATACCAACAACAACGACGTTAGAGATTATCTGGAAATCATTGGTTCCCATGGTTTAGACCAAGGCGTTGACATCCCCACGCACGGTCATACCTGCTTAGACCACTTCATGTGCAAGCTAGAGGGCGACCACCAATGTTTTGTACTTGAAACAGATATCACAGACCATTATCCCCTGTTCTTGACCTATGACAGATTCGAGAGAGTTGAAATTAACATCATGATATTGATGGAGACCGTTGAGAGGAACGGTGGCATCCAAATTatcatcaataataaaaaatgggaCAAAATAGCGGAGCAAATGAACATCGGCAAACAGCACGTGAGACGAAGCCTTGAACTGCTGCATTACAAAGCGCTATTACCATTTCTCACTTCTCTGTCGGTAACATTACTTAGAGCGAGCTGTAAGGTGAGACAAGTACGGAAAGTGCCGAGGGTCTCCAGAGCTCTAATAGATTCTCCGGCTCCCTGTAGCTCAACTAACGCAAATAACCTGCCCTTGTTAGATGTAGACGTCGAGGCGGAAGACGACAACGATGATAGGGCCCGGCGATTGTCCATCGCAAAAGTGGAATACAATAGAGGAGGCGGCAAAGAGTCGACCAATCCTTTTGATTCTGACTGTGAAATACCAGCATCTCAGCCAGCGCCTTTGgtagaaaaaaagaaagccaAGAAGAAGGTCAGTGACAAAACAACCAAGCGAGAAATAAGGAAAATTAGCCGGGCCCCGGTGGTCAAATCTAGCTTTTTGGCATCCGAGTCAGATTCGGACGTCGATTTGTCGAAGCCGTCGACGTCGACCAAAAAAAGGAGACTGGTGGATTCAGAGaACGAGCAAGATCTTGACGGTGAACCTATCCGAGCGGCTGCGTTGCGGAGCTTCCTATCAAGACGAAGTGGTTCCGGTTATACACTCCAGCGTGATCCCACCCGGCAGGGCAACTACTACGTGGAACTGCGTGTTTACAACGCTCGGGAAGCGGAGGCGCTCAGCACCGACCGCTGGAAACGGGCCTTAGTTACATTGAAATCGGCTGTTGATGACAGCACCCCGGTATGGACAGCGGTCACAAATCTTGTCATCGCTGCAAAAGAAGATTATCGGAAGATACAGCCAATACTCTATCAGTCTAACGTATTTTAA
Protein Sequence
MAKIGNLTVIGIYRPFCFKNPKTFLDALYALLTTTNSRNIILTGDINIDTLDTNNNDVRDYLEIIGSHGLDQGVDIPTHGHTCLDHFMCKLEGDHQCFVLETDITDHYPLFLTYDRFERVEINIMILMETVERNGGIQIIINNKKWDKIAEQMNIGKQHVRRSLELLHYKALLPFLTSLSVTLLRASCKVRQVRKVPRVSRALIDSPAPCSSTNANNLPLLDVDVEAEDDNDDRARRLSIAKVEYNRGGGKESTNPFDSDCEIPASQPAPLVEKKKAKKKVSDKTTKREIRKISRAPVVKSSFLASESDSDVDLSKPSTSTKKRRLVDSENEQDLDGEPIRAAALRSFLSRRSGSGYTLQRDPTRQGNYYVELRVYNAREAEALSTDRWKRALVTLKSAVDDSTPVWTAVTNLVIAAKEDYRKIQPILYQSNVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-