Egri000891.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- nfxl1
- Assembly
- GCA_017562165.1
- Location
- chr20:17997558-18001192[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.8e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 19 0.01 96 3.2 0.3 4 10 170 176 169 177 0.97 3 19 3.1e-07 0.0028 17.6 15.9 3 19 187 203 186 203 0.95 4 19 8.1e-08 0.00075 19.5 10.2 3 19 240 256 238 256 0.91 5 19 1.1 9.9e+03 -3.3 0.9 6 10 281 285 280 285 0.86 6 19 2.6e-09 2.4e-05 24.3 12.5 1 19 291 309 291 309 0.99 7 19 3.8e-06 0.034 14.2 20.1 3 19 346 362 338 362 0.86 8 19 2 1.8e+04 -5.3 2.2 5 10 385 390 385 390 0.88 9 19 6e-06 0.055 13.5 18.3 1 18 396 413 396 414 0.97 10 19 8e-09 7.4e-05 22.7 16.9 1 19 423 441 423 441 0.99 11 19 0.00014 1.3 9.2 5.5 10 19 490 499 487 499 0.90 12 19 0.13 1.2e+03 -0.3 1.4 1 12 509 519 509 519 0.88 13 19 0.4 3.7e+03 -1.9 3.4 14 18 548 552 548 553 0.85 14 19 0.45 4.1e+03 -2.0 0.1 7 12 568 573 568 575 0.84 15 19 3e-06 0.028 14.5 4.1 1 11 589 599 589 600 0.97 16 19 1.7 1.6e+04 -3.9 1.7 15 18 614 617 614 618 0.87 17 19 0.00041 3.8 7.7 13.3 3 18 630 646 629 647 0.89 18 19 8.5e-06 0.078 13.0 11.8 1 18 688 706 688 707 0.88 19 19 0.67 6.2e+03 -2.6 1.3 5 10 736 741 736 741 0.94
Sequence Information
- Coding Sequence
- ATGGCGCGACGATATCGCGATGCTGCAGCTAAACTACAGCAAAATGTTCAAAGACATCTGAAAGAAATGAAGGATCATCTTTCTTCTTCGGAAGATGAGGAGCCCTATGAATCCAGCGTCTTAGAAGGGGTATTTCAGAGCTACTGGCGAGGTGGGGGAGACAGTCATATGCTCAATAGAACCAAGAATCTTCTGGAAGAAGCACTAAGCGGGCGTTCCGTAACTTGTCTGATCTGCATCGCATCTATCAAACGAAATCACGCCATCTGGACCTGTGACCATTGCTACTCCTACTTTCATCTGTCCTGCATTCAAAAATGGGCAAACGACAGTATAAGTCTTCGTAGCGAAGAAACTCAAGCGCCCGTAACTGTgttcaaaccaaaaaaaatcgaatggtGCTGCCCTAAGTGTCGACAGGCTTACAGCAAAGACCAGATACCTCGTAAGTACAGGTGCTTCTGTGGTAAAACCGATGATCCACCTCAGCACCCATGGCAGATTCCTCATACGTGTGGTGAAGTCTGCGGTAAGAGATTATCTGAAGGAGACAATTGTAAACATAAATGTCTCCTCCTCTGCCACCCCGGACCGTGTCCTCCCTGCCCTCAAACAGTCAATGGTATATGTTACTGCGAAAAAGAAAGGAAAAAAGTCAGGTGCAGCTCAGCAAAGTGGTCATGTGGACAACAATGCAAGAAGACACTTCTCTGTCAAGCTCATATGTGTGAAAATGTTTGCCATGATGGAGACTGCCCCTCATGTAGCTATACCAGTTTACAGCCTTGCCAATGTGGTCATGAGAAATCTAAGAGACCTTGTAATGATCCATTCTGGCATTGCAAGAAACCGTGCAATAAACCATTTGATTGTGGCTATCATAAGTGTGATAAGATTTGCCACTCGGGCAGTTGTGGTTCTTGCCCTAATTCAGGCATGCGTTCCTGTCCCTGTGGGGCTAACCAGCGCTTCGTCCAATGTCCTGATGTGATGGAGACATGTCTTGGCACTTGCGGGAAAAAGCATGATGAGTGTGAGCACTCCTGCCCAGAGAAATGCCACAAAGGTCCTTGCCCACCTTGCCAAGTTCTGATACAAAAAAAGTGTCTTTGTTCAACACATACCAGATCTCTCCCCTGCAGTAAAGAGTTCAAGTGTGAGACTAAATGTAGAGGCACCCGGCCTTGTGGGAAACATGGGTGTGCTAGGAAATGTTGCAATGGGAACTGTCCTCCGTGTGAAAAAACTTGTGACAAGCCTCTTCAGTGTGGCCGTCACAAATGCACCAATATCTGCCACCATGGGCCGTGCTATCCGTGTCCACTTGAGTCTAAAGTGACATGTAAATGTAAGGAAACATATCTCAGAGTCCCATGTGGACGGGAAAAATTTGTCAAACCACCAAAGTGCAGTCTTCTATGCAAGGTGAAatataaatgtggtcatttggAAGAAAACAAGCACTATTGCCATTTTGGAGATTGCCCTCCTTGTAAAGCTATCTGCAATAAATCTTATCCTAATTGTGGACACAAATATGTGGCAGTATGCCATGAATATGTGGCAGTAGTATTCAAGCAAGTAGAGAAACCGGCAACACCCTGGGAGGTCCAACCACCGAAAACTAAAATCATGACTTTGGAATGCCCACCGTGTGATGTTCCCGTCCCTATCATATGTTTTGGAGAACACGAGATAGAAGAGCAATCTTGTCATTCGGCTGCGAGAAGGCCGTGTGGTCGCGACTGTGGCAAACCATTGAGTTGTGGGAACCACACCTGTGCTTTACTCTGTCATCTCTTTGCTTCTGACCCTCAGCACCCACATGTGCCGTATGTATGTAAGCCCTGTGATAAAGGTTGTGAAAAACCCCGTCCAGAAAAATGCATTCACAAGTGTGCGAAAGGAGCTTGTCACCCGGGGCAGTGCCCTTCCTGTGAAGTCTATGAACGTGTAGCTTGTCACTGTGGAACGACAGAGTTATATCTACGCTGTCGTGAACTTAGTTCTGCCACAGAAGAGATGCTGTCGTGCAAGCAGCAATGCCCAAAGAACTTAGAATGCAGTCACCGGTGTCGCAACATCTGTCACTCCGGACCTTGTGGCAATCAAACTTGTACAAAGAAGACCAAGATACACTGCCAGTgtggtaatttaaaaaaagatgctCCTTGCAATACTGTAAAGAGTGGGGAAGCCAAAATAACATGTGATGAAACATGTCAAGCAAAAAAGGTTGCTGCTAAATTAGAGCTAGAAAAGGAACAACAGAGGCTTAAGCTGTTGGAAGAAGAGAGAAATAAGAAAGAATTAGCTGAGTATGAGTGGAAACTCAGtgggaagaagaagaaataCAAGGAAAAGAAGGCTGTTATTAACAAGGACGATCGAAACTGGTTACAGAAGTATTGGATTCCGATTCTCTCTATAATCATTGTAATTATTGCAGCgtcttattacatattttatttataa
- Protein Sequence
- MARRYRDAAAKLQQNVQRHLKEMKDHLSSSEDEEPYESSVLEGVFQSYWRGGGDSHMLNRTKNLLEEALSGRSVTCLICIASIKRNHAIWTCDHCYSYFHLSCIQKWANDSISLRSEETQAPVTVFKPKKIEWCCPKCRQAYSKDQIPRKYRCFCGKTDDPPQHPWQIPHTCGEVCGKRLSEGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKKVRCSSAKWSCGQQCKKTLLCQAHMCENVCHDGDCPSCSYTSLQPCQCGHEKSKRPCNDPFWHCKKPCNKPFDCGYHKCDKICHSGSCGSCPNSGMRSCPCGANQRFVQCPDVMETCLGTCGKKHDECEHSCPEKCHKGPCPPCQVLIQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKTCDKPLQCGRHKCTNICHHGPCYPCPLESKVTCKCKETYLRVPCGREKFVKPPKCSLLCKVKYKCGHLEENKHYCHFGDCPPCKAICNKSYPNCGHKYVAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCDVPVPIICFGEHEIEEQSCHSAARRPCGRDCGKPLSCGNHTCALLCHLFASDPQHPHVPYVCKPCDKGCEKPRPEKCIHKCAKGACHPGQCPSCEVYERVACHCGTTELYLRCRELSSATEEMLSCKQQCPKNLECSHRCRNICHSGPCGNQTCTKKTKIHCQCGNLKKDAPCNTVKSGEAKITCDETCQAKKVAAKLELEKEQQRLKLLEEERNKKELAEYEWKLSGKKKKYKEKKAVINKDDRNWLQKYWIPILSIIIVIIAASYYIFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- iTF_00826500; iTF_00143571; iTF_00827669; iTF_00635086;
- 80% Identity
- -