Egri005790.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr29:7635231-7671945[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.089 5 7.8 0.1 1 23 580 603 580 603 0.95 2 11 6 3.4e+02 2.1 4.5 2 20 641 659 641 661 0.91 3 11 0.12 6.8 7.4 0.9 1 23 667 689 667 689 0.98 4 11 0.4 22 5.8 1.1 1 23 1199 1221 1199 1221 0.87 5 11 2.8 1.6e+02 3.1 0.5 3 23 1228 1248 1226 1248 0.95 6 11 0.042 2.4 8.8 3.5 3 23 1316 1336 1316 1336 0.96 7 11 0.067 3.7 8.2 1.5 2 23 1354 1375 1353 1375 0.97 8 11 2.2e-06 0.00012 22.3 1.5 1 23 1381 1403 1381 1403 0.98 9 11 0.00067 0.038 14.5 0.3 2 23 1409 1430 1408 1430 0.96 10 11 9.9e-05 0.0056 17.1 1.5 2 23 1437 1459 1436 1459 0.96 11 11 0.0033 0.19 12.3 0.1 3 23 1498 1519 1497 1519 0.97
Sequence Information
- Coding Sequence
- atgaTAAAAGAGAAATcttcacaaaaagaaaataatctttcgaaAATCGAAGATACatcaaaaatagaaaataaatcttcaaaaacaAATGATAGCTTTTCTAAAACAGAACAATCGCCTTCTATAAATAAAGAATCGTCTGCAAAAAAAGGAGACGTACTTTCGAAAGCGTTAAAGTTAGTTTTAAAAAACGCTGGTCCAAAAAAGAAGAAAACTCCGAACAGTAAGTCCCTTACGTGGCATGCTAAGAAATGGGAACCATCTGAACACTGTCTACTAGACTACACAAACTCCTGGCTCTTGGAGACGACTTCAGATACTGACGAATCTGCAGCCGATGAGCCAGAGTCAATGAAAGGAGAATCTTCAAAAATAGAAGATATATCTTCAAAAGTAGAAGAAATAACTTCTAAAGTAGAAGAAATATCTTCAAAAGTAGAAGAAAAATCTTCAAAAACAGAAGAAAAATCTTCAAAAACAGAAGATATACTAGAAGTGATACGTTCAGACAAAGGGGGCCTAATTTTGAGAAAGAAAACTAGTGTGATAAATGCGCTACCTAATTCTGTGAAAGTAATAGTTGTAACGAACGTGCGACCAGAAAAGAAGCTCGCATCAGTTTTAAAAGAATCTTCAAAAGAAGAGGCTTCAGCTAATACATCTTCAAAAGAAGAGGCTTCAGctaataaatcttcaaaaaaagATACTTTAGTTAACAAATCTTCAAAAGAAGAGGCTTCAGCTAAAAAATCTTCAAAAGAAGAGGCTTCGGCTAAAAAATCTTCAAAAGAAGCGCCTTCAGCTAATGaaccttcaaaaaaagaggagccgGTCTCGGTAGAGgTTTCATCTTTAGGAATACTTCGAAGTAGGTTAACCCAGACGAGGGGTAGCTCAGCATCGCCCAGGAGATTAGACCATACATACGCCATCCCTTCTGTAACCCCTGTGGTCATAGGGAGGCCTCCATCCCCTTTCACCGATCTTGTAAAGTGTCTATCACCTTCGACTCCAGCTCAACAAACAATGGCCTCAGCAAAATCTACATCACCAGCCTTACAGATCTCTGTCAAAGTAGAAGTTGAAGAATTCATAGAGAACACCCCCCCGAAACGCCTAAAAATCACTCATAGGaaacaaaaccaaaaactaATACCCATTTCCGAAGTTGACCTAGACGAATTGTACAATGTAGCAGATGAAATAAATAGAGCTGAAACAACGAATTTAGCTGATAAACATCTCAGTGTCGAAGTGAAGAATATTTGGGGACGCGCTTTGAAGCCGGAGGAAGTCTGCGATCCATACGAATTAATGATCCAACAAGCGTTCAACAGTTGGTGTGCCAGCATCTTAAACAACCCGAAGATTTACAGAGAACCGCCCCTGTTCTACCAATGTCGCATCTGCATGCTGGCCTGGTGGTATCTGCAACCGTTCCAAAACCACATCCGGACTCATGACCACACGAAACTGATTATACTACATCTAGAATCCGGTTTCGAGACTTTCTTCGTCGCTACTGATCAAATGATTAACGATATAGTGTATATACCTTGCGAAGGAAACTGTTTTAGATGCGGCAATCCATTCAACTACCACGTAAAGGAAAATGATGAGTTATATAACTGCAAGGTTTGCAGTTTAGCAGCTGCTACGCAGTTCGAAACGTGCTTGGGGCttcgaaatcacgagaacatgGAACAATGTATATTCCCTGGTAAAGTTAAACGCACACATGACTGTATGGTGTGTCCGTTGAAGTTTTTCACTGCTGGAGAAGTGTCCCTACACATGATAACAGCCCATGACGTCCGATCAGATGTCATAGTTCCGTTAGTGACGAAAAAGTGCCCGTtgtgtttgaaattttatttgtatcataGCTATCATACCTGCAGTAAAAGTCCTATGAGTGCGTCATGCAAGCACTGCTATAGGAAGTTTCATACGAAGGTCTTCCTGGATATCCACCATCTGTTTTTTGGGAAGAGTAACTTTGTGTGCCAGTATTGTGGGATGGTCTTAGAAGCACAATGTTCGAAAACAGAGCATATGTTGACTCATTCGGAGCATTTTCGCGTAGCGTACAAATGCCCTCTGTCTGAATGCCCGAACTATTTCTTCCCCGATTTGGATTCAGTGAGAATGCACAAGACAGCGTATCACAAGCAAAAGTTCGACAAGCGGAGGACGTATTATGAAACGGTGATCGTACCGACACGATGCGTGAAAAAAGGTTTCTTTCAAATGATTGACAGCACAAAGAAAAATACAGGTGTTGTGATTTGTTCAAAGGACGACTTTACTGATGAGGATACCGACTGGTGTATACCGACAAGCGACAGAACAGTTAACAACAGACCAGCAACGGCCAAACATACATACAGGCCAGCAACGTCCAAATCGACAAACAGGCCAACATCGTCCAACAAACAGGCAAACAAGCAAGCGAGCAAAACAACAAACGTTGCGGACGACGATGACGATGACGTCATTATTATTGGGCAGAATGAAGAGCCACCAATAGAAATAGAAAGTGACGGAGAGGAATTCGAGATGGACTACGCAGAGATGCTGTCGAAAGTCTTCAAAGTCGATTCCAACGTATACAAGCCACGCTCCGCTCCAGAAGAAATCAGAACTGAAATAAAACTGGAACCGACGAATTTTGATATTGATAATATGATTGATATTGAGgaagatattataattttaaaacaggaACCAATTGAGGCATGCTTAGGTAAATCATTCCAGAGTGACAGTGTTCGAACTGACATAAGTCAAAGCGACAGCTGTCAAGATGACAGTCAAATGGACATATGTCAGATTGACAGCTGTGAAGATGAGAGTCAAACGAACATAAGTCAGAGTGGCGGCTGTCTGGATGACAGTCAAAAAAGCAGACCTCAAAGTGACATCTCTCAGGATGGGACAACTCAAGCGAACGATATCAGCTTTGAAAATGGTGTCGAGAACGAGACATGTCTTATAATACAGAATGTCAAATCGGAACCTATGGATTACGGTACTGTATCTGAGACTGACATCACAGTTGTCAAAATGGAACCGGAGGATGTCAAAAAAGAGTTAAGAGACTGCTCAGAGATAGATAATACAGATGTCAATCAAGACAAGTCCAAAGATGAATTGGTTGTATTTGTCACAACAGAGAGTGATGATTCAAAAGACCCAATATTTGAACCAGAACCGAAAGTAGATAAACCAAAACGCAATAGGGATTCGCGTAAAAGTACAATATACCGTAAACTTATCGTGCAAAGGGAACGTATTCAACAGAGGAAAGTATTTTTCGAGAAccacaaaataaatcaaatgtaCAAAGACGCAGCAGAGATTTTAGATAAGATCTCGCCTGTTGATATTGATGCGAAGCCAGTAAAGGATCTGGCTATAAACAGGGCTGGTAAGAAGATGAAAATACAGAAGCTGTATCGATGTTGTAAGTGTGGATACACGAATCTGCACAAGTTCTACGTTCTACATAGGAATTCTCAATGTGAGCTTTGCCCGATGAAAGACGACGACGGAGCGTGGTCGAGGAAGGTCCCGATCATCCGTCGGACATCGTACCTCTGCACGAAGTGCGACACGGGATTCAGTTCGCTCCGCACGTACCTGGGGCACTTCACGGAGCACGGATATGGCGCGCTGGCGTGCCCGAGCTGCGCGCTCAAGTTCGAGGAGGCGAAGGAGTTGCTCTCGCACTTCCACAAGCACCTGAAGCAGAGCTTCCTCAACTGCTGGGTGATCGACAGCGAGGGGCAGGAGACGGCCAAGAAACAGATCACGTGTCAAACGTGTCGCGGGACAGTTCTGCCCGAGGATGTGTTCCCGCACTGGGACAAGAGGACCCTCGAACCTGACTTACTGAACTTGACGTTACAGCAACTTCGCGCGGAGACGAATCGCGAGCGCGGCTGCATGCTGTGTCACCGCAAGTTCACTCGACGGAACGACATCAAGAGACACCTCATAGAGCATTTACTGATCGACGCACTCGCCAAGAAAGACGGCACTGAGAATAACACGCTCAGATGTCAGATGTGCTCTGAAGAGTTCTTCCGCTTGGACGAGTACAAGTTCCACATGCGGTCGCACGGCGGCCTGCCGGTCTACCGGTGCGGCCTCTGCGACAGGACGTTCAGCGATTCCAGCAACTTCGCCAAACACAAGAAAGTACACAACATGAAGgtGCTGATCTGTGATATATGCAATAAAAAGTTCCAAGCCAAGTCGTCAATAGAAAAACATATGATTATGCACCAGACGACAGAGCCGATCCAGTGCGAGTCGTGTCCTCGCGTGTTTTATTCGCGCTCACACTACAAAAAGCACATATCGATGGTGCATATGCGACATAAGACTCGCTTCCGCTGCGTGGTGTGCAACGTCTGGTTCAACACCATGCAGGAGAAGTGGGAGCATGCCTGGGAGGTGCACCGCGAGCGGAAGGACCGCGCCGACTGCCCCGTGTGCGGGCTCGCCTTCAGGAAATACCAAGATGTGAAGAACCACGCGAAAACGGATCATCAGGTGGAGCTCAAGTACTACAACGCAGAGCCGGAGGCCCAGGGCTCCGCTCGCGCCAAGGCGTCGGCTTGTCGTTTGCGGAAGACCAAGAAGCGGCGCATCATCGTAGCCatttccacaacgaacggtcccgcgcaacctgtaaccagcggtttccagcgacctttgtga
- Protein Sequence
- MIKEKSSQKENNLSKIEDTSKIENKSSKTNDSFSKTEQSPSINKESSAKKGDVLSKALKLVLKNAGPKKKKTPNSKSLTWHAKKWEPSEHCLLDYTNSWLLETTSDTDESAADEPESMKGESSKIEDISSKVEEITSKVEEISSKVEEKSSKTEEKSSKTEDILEVIRSDKGGLILRKKTSVINALPNSVKVIVVTNVRPEKKLASVLKESSKEEASANTSSKEEASANKSSKKDTLVNKSSKEEASAKKSSKEEASAKKSSKEAPSANEPSKKEEPVSVEVSSLGILRSRLTQTRGSSASPRRLDHTYAIPSVTPVVIGRPPSPFTDLVKCLSPSTPAQQTMASAKSTSPALQISVKVEVEEFIENTPPKRLKITHRKQNQKLIPISEVDLDELYNVADEINRAETTNLADKHLSVEVKNIWGRALKPEEVCDPYELMIQQAFNSWCASILNNPKIYREPPLFYQCRICMLAWWYLQPFQNHIRTHDHTKLIILHLESGFETFFVATDQMINDIVYIPCEGNCFRCGNPFNYHVKENDELYNCKVCSLAAATQFETCLGLRNHENMEQCIFPGKVKRTHDCMVCPLKFFTAGEVSLHMITAHDVRSDVIVPLVTKKCPLCLKFYLYHSYHTCSKSPMSASCKHCYRKFHTKVFLDIHHLFFGKSNFVCQYCGMVLEAQCSKTEHMLTHSEHFRVAYKCPLSECPNYFFPDLDSVRMHKTAYHKQKFDKRRTYYETVIVPTRCVKKGFFQMIDSTKKNTGVVICSKDDFTDEDTDWCIPTSDRTVNNRPATAKHTYRPATSKSTNRPTSSNKQANKQASKTTNVADDDDDDVIIIGQNEEPPIEIESDGEEFEMDYAEMLSKVFKVDSNVYKPRSAPEEIRTEIKLEPTNFDIDNMIDIEEDIIILKQEPIEACLGKSFQSDSVRTDISQSDSCQDDSQMDICQIDSCEDESQTNISQSGGCLDDSQKSRPQSDISQDGTTQANDISFENGVENETCLIIQNVKSEPMDYGTVSETDITVVKMEPEDVKKELRDCSEIDNTDVNQDKSKDELVVFVTTESDDSKDPIFEPEPKVDKPKRNRDSRKSTIYRKLIVQRERIQQRKVFFENHKINQMYKDAAEILDKISPVDIDAKPVKDLAINRAGKKMKIQKLYRCCKCGYTNLHKFYVLHRNSQCELCPMKDDDGAWSRKVPIIRRTSYLCTKCDTGFSSLRTYLGHFTEHGYGALACPSCALKFEEAKELLSHFHKHLKQSFLNCWVIDSEGQETAKKQITCQTCRGTVLPEDVFPHWDKRTLEPDLLNLTLQQLRAETNRERGCMLCHRKFTRRNDIKRHLIEHLLIDALAKKDGTENNTLRCQMCSEEFFRLDEYKFHMRSHGGLPVYRCGLCDRTFSDSSNFAKHKKVHNMKVLICDICNKKFQAKSSIEKHMIMHQTTEPIQCESCPRVFYSRSHYKKHISMVHMRHKTRFRCVVCNVWFNTMQEKWEHAWEVHRERKDRADCPVCGLAFRKYQDVKNHAKTDHQVELKYYNAEPEAQGSARAKASACRLRKTKKRRIIVAISTTNGPAQPVTSGFQRPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -