Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr24:8709458-8734469[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.00025 0.014 15.8 0.3 1 23 518 540 518 540 0.98

2 4 0.0054 0.31 11.6 7.7 2 23 549 570 548 570 0.97

3 4 0.0023 0.13 12.8 3.6 1 23 576 598 576 598 0.99

4 4 9.4e-06 0.00053 20.3 3.9 1 23 656 679 656 679 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.00025	0.014	15.8	0.3	1	23	518	540	518	540	0.98
2	4	0.0054	0.31	11.6	7.7	2	23	549	570	548	570	0.97
3	4	0.0023	0.13	12.8	3.6	1	23	576	598	576	598	0.99
4	4	9.4e-06	0.00053	20.3	3.9	1	23	656	679	656	679	0.98

Sequence Information

Coding Sequence: ATGAAGGCGTGCAGTGTTGAAGGCTGTAAGGGGCCTTGCACACCCGATCCAGTATTTTTCGaGTTTCCATCGAGCCGTCTTCTCCGCAAGCGGTGGCTGGATGCCATCAACTGCCCTTCAGCGGGGGCAGATGCCACGGTCTGCATCAGGCACTTCAACCGAACTGACTATGACCTGGTCCGTGGGGAGACCAGGCTGAAGACCCGGTCTGTTCCTAGCAGGAGGATACGGGATtCTATTGATGCGGAAAGCGAACCAGACTCAGGAACAGAATCAGACACGTCATCAGCTAGCGAGGTATCAGACGCCCCTAACGACGTCACACCAGATAAAAagaaaagcaaaataaaaaataataaagaagtaAAAGATGATAAAAcagataataaagaaataaatcatgataatacagataataaacaaataaatattgaaaatacaGATAATAGAAACATAACGAATGAAAATAACTTAAGTGGAGTCGGTGAGCACCGCAAAAAtgattcaaatataaaaaaccgttCCGATTACAAAAATGATAGTACAGAACGAATGAATATTGATAACCTCGAATGTAGATTAAGTAATGATGAGAAAGGAATAATAAATGAGaataatgaaaaaacaaatgctgaaaatgaaaaattaagtGGTAATAATGAAACCGTAAatgatactaaaaaaataacgaaaaacaAAGAAAAGGTAGATACTGAAAACGACGATAATCTGAAAAGAACAGAAGACAATGAAAAAATACCAGATAATCCAAGAATAACTAaagataatgaaaaaataatcgaCAGTAATGGAGTAATGAATGAGGGTAATGTAAGTGAAGGTAAAAAACCTCGAGGCAACAAGACCCGGTGTAAAGTAACAGCAATGAGACCAATCAATGGGAGAAGACGCAGTTATAGCAGTGACAGCACTAACAGTGATAGTGTGAGCAATAGCCCTCGCCCACTAGAACCGGACGCCGGCAAAGAAGACATCGAAGAGTCTCTGCAGCATTACTACATAGAGAATAAGAAGACGGAACGCCAGGTCGCCGCCATGACCGACGTTATGAACGAACAGGAGAGCAGATCTGATGACGGTTTGAAGGGGCAGGAGGCGGCTGAACCGGTTTACATAGAACTTTCAGTTGGacaaggGTCCACAAAACAGGGCCAAGATCCAGCGGAGAACGATTGTCTCATGCTGCTAGAAAGCGTTCAGTGCGACATCGATCCGACATTGATGCTGGCAGCCAGGGAGGAAGACGAAGCGAACATGGAACACGTCGACTTGGcggacgatgatgatgatgatgatgatgacgaaatCCAAATTATCGACAAAAAGAAAGAAGACCCCATCAGTCTTCTAACATCGAGCGACGAAGACGACGTCATAATCCAAGAGCCGAAATACGACCTAGTCGAGGTCTCATCTGCCGATACCTCCGAGGATGACGTTCCTCTCGTCAAACTCGTCAAACCATCAGGCAAGCCTGATGCGAAGAAAATGAAGAACCTGATAACGAAACTCCTTTGGGGAGGAAGGGATTACTACTGCGTCCAATGTGGATTTTCCACATCCAACTCAGCCGAATACACAACACACATGGCAGTGCATAATGAATGCGAGAAAATTATACAGTATTGCCATGATTGCGGCTTCACGACGAGCAGTAAGCATCAAATGcaaaaacacaagaaaaaacATAAGACCGAGAAGAGATTCAAATGCCAATTGTGCAACTATGCAGCGAAGCATAAAATGAGCTTACTATACCATATGAAGACGCATAAAAATAGTGGTTTGAACGAAGTGGAGCTAGCCATATGTGGGACTTTCGATCCAAGTGAAAAAGATAAAAGTGCTAGTCAAAGTGAAAGTGCAACTCAAAGTGAAAGTAAAAGTGAAAGAAGGAAAAGTGAAAAGAGGAAGGGTGATCGGATAAGTGAATCTGATAAGAGGTATAAGTGTAATACGTGCGGCTATAAGACTAATAGGAAGTCGGACTTGCTCAGGCATAGGAGAAGGAAGCacgaggctgatgatgatgatgaggacgAGGAGTATGTTCCTTGA
Protein Sequence: MKACSVEGCKGPCTPDPVFFEFPSSRLLRKRWLDAINCPSAGADATVCIRHFNRTDYDLVRGETRLKTRSVPSRRIRDSIDAESEPDSGTESDTSSASEVSDAPNDVTPDKKKSKIKNNKEVKDDKTDNKEINHDNTDNKQINIENTDNRNITNENNLSGVGEHRKNDSNIKNRSDYKNDSTERMNIDNLECRLSNDEKGIINENNEKTNAENEKLSGNNETVNDTKKITKNKEKVDTENDDNLKRTEDNEKIPDNPRITKDNEKIIDSNGVMNEGNVSEGKKPRGNKTRCKVTAMRPINGRRRSYSSDSTNSDSVSNSPRPLEPDAGKEDIEESLQHYYIENKKTERQVAAMTDVMNEQESRSDDGLKGQEAAEPVYIELSVGQGSTKQGQDPAENDCLMLLESVQCDIDPTLMLAAREEDEANMEHVDLADDDDDDDDDEIQIIDKKKEDPISLLTSSDEDDVIIQEPKYDLVEVSSADTSEDDVPLVKLVKPSGKPDAKKMKNLITKLLWGGRDYYCVQCGFSTSNSAEYTTHMAVHNECEKIIQYCHDCGFTTSSKHQMQKHKKKHKTEKRFKCQLCNYAAKHKMSLLYHMKTHKNSGLNEVELAICGTFDPSEKDKSASQSESATQSESKSERRKSEKRKGDRISESDKRYKCNTCGYKTNRKSDLLRHRRRKHEADDDDEDEEYVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635498;
90% Identity: iTF_00635498;
80% Identity: iTF_00635498;