Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr31:13231330-13260331[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00062 0.035 14.6 2.1 2 23 295 317 294 317 0.97

2 8 0.00013 0.0072 16.8 1.0 1 23 322 344 322 344 0.99

3 8 4.5e-06 0.00025 21.3 0.4 1 23 348 370 348 370 0.99

4 8 0.0033 0.18 12.3 0.1 3 23 385 406 384 406 0.93

5 8 0.0036 0.2 12.2 1.1 1 23 410 432 410 432 0.98

6 8 0.00011 0.0065 16.9 0.2 2 23 466 487 465 487 0.97

7 8 0.067 3.8 8.2 0.8 1 19 493 511 493 516 0.86

8 8 0.59 33 5.2 0.5 2 23 522 544 522 544 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00062	0.035	14.6	2.1	2	23	295	317	294	317	0.97
2	8	0.00013	0.0072	16.8	1.0	1	23	322	344	322	344	0.99
3	8	4.5e-06	0.00025	21.3	0.4	1	23	348	370	348	370	0.99
4	8	0.0033	0.18	12.3	0.1	3	23	385	406	384	406	0.93
5	8	0.0036	0.2	12.2	1.1	1	23	410	432	410	432	0.98
6	8	0.00011	0.0065	16.9	0.2	2	23	466	487	465	487	0.97
7	8	0.067	3.8	8.2	0.8	1	19	493	511	493	516	0.86
8	8	0.59	33	5.2	0.5	2	23	522	544	522	544	0.96

Sequence Information

Coding Sequence: ATGAAAATGGCTGAACTCCTGATTCTGAAGAATCTCGTAAAACATATTGCAAACGATCGTCTCGGTGATTTATGTCTACTATGTTTAACCGCACTTGAGAAATCTTATTCCGAAAACATCTTTTCTTTGATATGTAGAGAAGAGTCGGAATATTGTGTCGCTGATGCTTTGGAGGCTGTCTGCCAATTTAAGTTTGACAAGTCTGAGAATTACAATGTCTGCATAGATTGTTTCAATAGTGCTACAGAAGCTTACAAGTTTCATCTGCAGGCTAAGCGAAGTATGGAACTTATCATACAGTACACAAATGAGCTTTTTGACAATGTGAAGAATGTCGAAATCACAAGTGATGACATGGAAAAATTGCTTTTTGTCCCGTTACCAGAATACACTCCTAAGACAAAGATATTTGAGTATAGTTTAGATGGAGTAGGTAGATCGGACAATTCTTGGAAAGAGGGTGCAgctgataaaaaaattgagtttgtcCATAAAGTTGATAgcaaattaaaacttaaaagcAATCTAGACAGCAATTTAGAAAACGATGGTAGTATTGCTGATAGTAATTTTGAATACAACAGTGTAACTGACACAAATGACTATAGCAGTACAGCTGATAATATAGATGAAGAAGTTGGCCAGAAGAGCATGTTGGCTACGGACTTTGACATGGACCAAATCAGTAGACTAATTGATAGCCATAATGATAACACAGAAAACAATAGTAAAGTACctgaaaacattattttattagttgaaAAAGAAGATGAAGACGAAAATGCAAATTGTGCTGTTTCTATGCAATCTTCAGATGATGACATGGTAGTGATAGTCAATGAGAAGAAGGCTAGGAAGCAAAGAGATCCCATGGAGTATATGACATGTAATCATTGTCCTATAAAGTACAGATTTGTGGCCAAATTGAAACAACATATGAAGACAGTGCACAATATTGTTTTATACTACTGCAAGATTTGTAAGAAAATGTCAGAAGACAAAGAAGAATACGAAGAACATTTaaagacacacacagacaagtATCAATGTACAATATGTAACACTGTATATAAGAAACCAGAGACCCTGGCTACTCACATGTTGTCTCACGAGAAAAGTGACTCCATCGAAAAGATAGAGAATGGCAACATTTGCGAGCAATGCGGCGCGCTCTTCGAGAGCGAAGAGAGTCTGGAGCGACATATGACAGAGAGACACACGCAGCGCTACACCTGCTACTACTGCGGTCGCAGGTACCGCGGCGAGCTCAGCTTCGAGGGGCACGTGCGCAAACACGAGGAGTACTGGGCGAGGAGACAAGGATCGAAAACCAGCCAGGCGAGCGAGAAAGCTGCAGAAAAGCAAGGGAGTAAGCGAGACAAAAGCAAACGTTCCGTCTGCCAGACCTGCGGCCGGGACTTCGTGGACGAGCGCTCGCTGTTATGGCACCAGAGGCTCCACGACAACGACCGGCCTTTCGTTTGCGACGTGTGCGGTCGCGGGTTCGTGAGCCGGAACCGACGCAACCAGCACGCTCTGTGTGCTCACACCGCGCCGCAGCGGCGCTGCCCGCTCTGCCCCGCGCTCTTCCACCTGCGCTCCATGGTGAACACTCACGTCAAGAAGGTGCACCTGAAGGCGCACAAGCGTCGGAACCGCACGTCGAAGCACCAGCACGTGTCGTGGCGCACGCAGCCCGTGCCCATACAGGAGCTCAGCATCGACGTGCAACACGACGTGCTCGAGATAAAGGCGGCACGGGGTGACGCAGAACCTGGCAGCTACGCTTCTTCGACCTCTCTGTTCGCATGA
Protein Sequence: MKMAELLILKNLVKHIANDRLGDLCLLCLTALEKSYSENIFSLICREESEYCVADALEAVCQFKFDKSENYNVCIDCFNSATEAYKFHLQAKRSMELIIQYTNELFDNVKNVEITSDDMEKLLFVPLPEYTPKTKIFEYSLDGVGRSDNSWKEGAADKKIEFVHKVDSKLKLKSNLDSNLENDGSIADSNFEYNSVTDTNDYSSTADNIDEEVGQKSMLATDFDMDQISRLIDSHNDNTENNSKVPENIILLVEKEDEDENANCAVSMQSSDDDMVVIVNEKKARKQRDPMEYMTCNHCPIKYRFVAKLKQHMKTVHNIVLYYCKICKKMSEDKEEYEEHLKTHTDKYQCTICNTVYKKPETLATHMLSHEKSDSIEKIENGNICEQCGALFESEESLERHMTERHTQRYTCYYCGRRYRGELSFEGHVRKHEEYWARRQGSKTSQASEKAAEKQGSKRDKSKRSVCQTCGRDFVDERSLLWHQRLHDNDRPFVCDVCGRGFVSRNRRNQHALCAHTAPQRRCPLCPALFHLRSMVNTHVKKVHLKAHKRRNRTSKHQHVSWRTQPVPIQELSIDVQHDVLEIKAARGDAEPGSYASSTSLFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634882;
90% Identity: -
80% Identity: -