Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr29:3124440-3155702[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0031 0.17 12.4 0.9 1 23 456 478 456 478 0.99

2 10 0.35 20 5.9 2.1 1 23 485 507 485 507 0.96

3 10 0.022 1.2 9.7 2.0 1 23 511 533 511 533 0.98

4 10 0.00018 0.01 16.3 2.3 1 19 538 556 538 558 0.98

5 10 0.081 4.6 7.9 0.0 6 23 580 598 576 598 0.92

6 10 0.21 12 6.6 0.3 1 23 619 642 619 642 0.96

7 10 0.00013 0.0074 16.7 0.1 3 23 659 679 657 679 0.95

8 10 0.029 1.6 9.4 0.8 1 23 685 707 685 707 0.94

9 10 1e-06 5.6e-05 23.4 1.8 3 23 714 734 713 734 0.97

10 10 0.0005 0.028 14.9 0.6 1 23 740 763 740 763 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0031	0.17	12.4	0.9	1	23	456	478	456	478	0.99
2	10	0.35	20	5.9	2.1	1	23	485	507	485	507	0.96
3	10	0.022	1.2	9.7	2.0	1	23	511	533	511	533	0.98
4	10	0.00018	0.01	16.3	2.3	1	19	538	556	538	558	0.98
5	10	0.081	4.6	7.9	0.0	6	23	580	598	576	598	0.92
6	10	0.21	12	6.6	0.3	1	23	619	642	619	642	0.96
7	10	0.00013	0.0074	16.7	0.1	3	23	659	679	657	679	0.95
8	10	0.029	1.6	9.4	0.8	1	23	685	707	685	707	0.94
9	10	1e-06	5.6e-05	23.4	1.8	3	23	714	734	713	734	0.97
10	10	0.0005	0.028	14.9	0.6	1	23	740	763	740	763	0.96

Sequence Information

Coding Sequence: ATGGTTGATCCTTTAGATATCTGTAAAATATGTTTACGTACCGACGTGAAGCTCCAGGAGATCGATAAAGAATTACAAAACTTCCATTATGCTGTGACTGATTTTGCTCTGTTTCACGTCGACTCTCGCCTGTGCCCTGAGTGTGAGTATCTGTTGAGAAAGTGGCACAATTTCAACCAAAAATGTGTAAAAGCTGGCAAAATACTACAACTATGGCATCGGAACATGATCATGGGGAAAACAAACAGGAAACCGTTGAACACCCTCTTTTCACAAGTACCCCAGTCGAAACTAAAAGTTTATGCGCAAACCGtcacacaaacatacacacacgaAGAAGATGAACCAATCCTGGGGCACGACAATGCATTAGAAAAACAGCATGACTATAATGTCAAAACCGAAATCGAAATTGAAATACCTCAAGTACAAATCAAAGACGTAATGGTAAAAGATGAAGAATTACAAGGTATTGTTATCGAAAACgttgaaaaaaatgatatagaactaataaatgaatatgacaGCGAAAATGATGATATCAATGACGTAGGAAATGATGATTCAAGTGTAAGTAGTGACGATGAATGCTTAGCAGCTAAGAAACTACGTAGAGTTGAGTCTACAcaatcaaaagtaaaaaaagaaaagacaaaAAGAATTACAAAGACATGTTCCAAAGAAAAAGTTAAGAAGAATTTCACCAAAGAAGATATTCATTTTGAAAATGGAACCGAACTCAAAACAGAAGAAAATATAATTGATAAACTCCAAAACGTTGATGAAGATTTGAATACAGTATTTGTTAATTGGGAGAAGACATCATTGAAAGAATTACCGACTGTGACTTATGATAAAGATAGGTCTACAAAAAGAAATGTTACAAAGAAGAAACTTGTTGAAAAGAAAGGTAAGAAAAGAAGAAAAGATAAGAAAAAAGATGTCGTTGCCAAATTGAAATGTTTGAAAGCGGATTTGGAAAATTTTTGGGAGAATTGCGGAAAAATAGTCAATTATAAGGAAGGACTAATTAATCCTAAAGAAAGATTAAGAGCGGAGCTGGTGTCCAGGTTTTCGTCGTGCGGGGAACTGAAGACAGACGATGGCTTCGTCATTGACAAGGAGGTGGTCTTGGGCTGCTTCGACAGAGTGTCAGAGTGTCTCATGAAGAGGCTGTGGCGGTTCATGCACGgtAAAGCAACGTTAGAATCTCGAGCGATAAACACCCTAAAACATATACAGAATAAGTACCAAAATGAGCACACATACGAATCCGTATTCACTATAGAATATCTCAATACGAAAGAAAAGGTCGCGGAGGAGTTTGAAAAGAGGCGGTCTTACGAATGTTTCCTGAACGCCAAGTACAGATGCGAGCAATGCTTCTTAGGGTTCAAATACGAGGCCCAGATGGAGAACCACAGAAACATGCATGAGGAAAGCGCGGGGGAGTTCGCGTGCCCCACGTGTGGTGTGCGGCACAAGAGTAAGAAGAGCCTCGACTCACACTCTAAGAGCCACGAGGCAGTCTACAAGTGTAAGCTGTGCCCTCTAGTCACTTACTACAGGTATTCGATGATGAACCACTACAACCAGCACGAGGGTATGGAGTACCGCTGTCAGCTCTGCGATACCACCTTCAGGAGCAAATCTGCTTTGAAGACCCATTGCGGATTGCGACATAGTGGTAAAAATGCAACGGACACCCAGTCGGGCGGCACAGTCCCGTGCGTGCCCTGTGGTCTGAGTTTCCCGACGCGGCCGGCCTACCTCAAACACGCAAGATCCACACACAATTCCACCACTTACATAGCACATAAGGCAAAAGAGGGAGCGCCGAAGAAACGACCCGTTCACACGTGCAGAGTGTGTAACGCGGTGGGAACCAGCATCGGGTGGCTGACGCTCCACTTCCGCATGGAGCACCCCACCGTGGACATGTCGGTGCTGTACGCAGACAAGCACGCGCACCTCTGCGAGATCTGCGGGAAAGGGTACGCGAACATATACAACCTGCGCGACCACCTCGCGATCCACGCGGGCGTGCGCGCGCACGCGTGCGCGGCGTGCGGCGCGCGCTTCCACCGCGCCATCAGCCTCGCGCAGCACAGGTTGACGCATCAGCCGCCGCGGCGCGCCTGCCCGTCTTGCGGGAAGCGGTTCCATTCGCAGAGCAATCTCAACAACCACATGCGAGGTCATACAGGCGATAGGAGGTATAAGTGTAATCTATGCGGGAAAGGGTTCTTACATCGGAACGCGTTGAACGAGCACGTACGGGGCGTCCACTATAAATTGAGACGCGTCCGGAAAAGAGACGGGGAGAAACTGATGCGGAATGACGGGAACTGA
Protein Sequence: MVDPLDICKICLRTDVKLQEIDKELQNFHYAVTDFALFHVDSRLCPECEYLLRKWHNFNQKCVKAGKILQLWHRNMIMGKTNRKPLNTLFSQVPQSKLKVYAQTVTQTYTHEEDEPILGHDNALEKQHDYNVKTEIEIEIPQVQIKDVMVKDEELQGIVIENVEKNDIELINEYDSENDDINDVGNDDSSVSSDDECLAAKKLRRVESTQSKVKKEKTKRITKTCSKEKVKKNFTKEDIHFENGTELKTEENIIDKLQNVDEDLNTVFVNWEKTSLKELPTVTYDKDRSTKRNVTKKKLVEKKGKKRRKDKKKDVVAKLKCLKADLENFWENCGKIVNYKEGLINPKERLRAELVSRFSSCGELKTDDGFVIDKEVVLGCFDRVSECLMKRLWRFMHGKATLESRAINTLKHIQNKYQNEHTYESVFTIEYLNTKEKVAEEFEKRRSYECFLNAKYRCEQCFLGFKYEAQMENHRNMHEESAGEFACPTCGVRHKSKKSLDSHSKSHEAVYKCKLCPLVTYYRYSMMNHYNQHEGMEYRCQLCDTTFRSKSALKTHCGLRHSGKNATDTQSGGTVPCVPCGLSFPTRPAYLKHARSTHNSTTYIAHKAKEGAPKKRPVHTCRVCNAVGTSIGWLTLHFRMEHPTVDMSVLYADKHAHLCEICGKGYANIYNLRDHLAIHAGVRAHACAACGARFHRAISLAQHRLTHQPPRRACPSCGKRFHSQSNLNNHMRGHTGDRRYKCNLCGKGFLHRNALNEHVRGVHYKLRRVRKRDGEKLMRNDGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634857;
90% Identity: iTF_00634857;
80% Identity: -