Egri005736.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- zfy1
- Assembly
- GCA_017562165.1
- Location
- chr29:8848470-8891218[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.4 1.3e+02 3.3 1.3 1 23 368 391 368 391 0.93 2 11 0.001 0.059 13.9 1.0 1 23 398 420 398 420 0.99 3 11 0.0068 0.38 11.3 1.3 1 23 424 447 424 447 0.95 4 11 0.14 8.1 7.2 2.0 1 23 454 476 454 476 0.89 5 11 2.7e-06 0.00015 22.0 1.0 2 23 481 503 480 503 0.96 6 11 0.00013 0.0073 16.7 1.3 1 20 509 528 509 531 0.93 7 11 0.014 0.82 10.3 2.0 2 21 542 561 541 566 0.93 8 11 2.3e-05 0.0013 19.1 0.4 1 23 574 597 574 597 0.94 9 11 1.8e-05 0.001 19.5 0.5 1 23 602 625 602 625 0.98 10 11 4.8e-07 2.7e-05 24.4 3.1 2 23 633 654 632 654 0.97 11 11 1.4e-05 0.00077 19.8 2.4 1 23 660 683 660 683 0.96
Sequence Information
- Coding Sequence
- ATGGACATACTGAAAGAAGAGATCTCGCTACAAATCCTATGTAGTGCTTGCTTGTGTATCGGGAACCAGTTATACAGAGTCACAGATGAGAAACTTAAGCAGTACTACCTCGGTGCCTTAAACGAAATCCCTCTATACAATATGCCGACAGCATCACCTGTGGTCTGCCTGGACTGCCGAGGACTGCTGCGAAGATCATACGAGTTCAGGGAACAGGTCAAAGATTCTCACCGGATACTCATGACATATACCAGTGAGAATCTCACCGAATGCCTTCTAACGGACGTCTCGCGGCCGCCACGGCTAAAGATTCAAAGCAATGACTCCATCAATATAGAACCACAAATCCCCAGTGAAAaatctgtattaaaaaaacataagaaGTGGAAGAGGGATTCTCGAGGGACACGAAGTCAGaGGAATGATGACCAAAGCGAGGCAATACAAGCTCTATCTGGCAGCTCGAGCCCCCCACCACAGCCAAGTGGGGCCAGCCTTGCGAGGCACACAGGAGaCACAGATTACGATATCCCATTGGGAGATTTAAAACAGGTAGACACATTAGCAGACATTGACACAGAACTGACTGCCATCATCACGGCAGACACAGGACCGatcaagaagaagaaagaagtgAGGAAGAAGATTGGGAAACTCAAGAAGAAACAGAAGAAGAATGGAGAAAGGCATAATGACCAAAGCGAGGCAATACCAGCTCTATCTGGCAGCTCGAGCCCCCACCACAGCGAAGTGGGGCCAGCCTTGCGAGGCACACAGGAGGTCTATGTGAAAGATGAATTGAAGATTGAATGTTATGACAGCAACAGAgaCACAGATTACGATATCCCATTGGGAGATTTAAAACAGGTAGACACATTAGCAGACATTGACACAGAACTGACTGCCATCATCACGACAGACACAGGACCGatcaagaagaagaaagaagtgAGGAAGAAGATTGGGAAACTGAAGAAGAAACAGAAGAAGAATGGAGAAaaagTCGATATACCGAATATAGTGACAATACACATGACGCACGAGGAAATGGTGGAAGAGAGACGGAAGGAGAGTAACAGAGACAGCTATACGAACGCCGAATTTAAATGTGAAAGCTGTATTTTAGGGTTTAACTATATGAAGTCTTATAAGAAACATTTGTTGGCCAGACATTCTCCTAGCATCGGGAAATATACATGTCCAATATGCAAAACAGTGTTGACCACTGTCGAATCATTTTCCACTCACTACAAAAGACACATGAAAAGGTACGAGTGCAGTATTTGCCAGAAACGCACGATAGACCTAAAGTCGATGCAGCAGCATTACTACTCCACGCATGAGATATCACTGAAACAGTACAAATGTAGTGACTGTGGGAAGATATCCAATTCAGTGGATTCCCATCGTTACCATACGGACACCCATAAGTCTCGTCTGCAGTGCCCCGACTGCGATAAGACCTTCAGACACCGAGGGGGCCTCCTCAACCATAAACTCACAGTGCACGAGGCTAGGAACAAGTTCCCGTGCACGCATTGCGGGAAGGTGTTCCGATGGAAGAACAGCCTGAAGCGACATCTGCCCGTGCACGATGAGAAGAATAAGCCGGAGTCATCGTGGCAGTGTTGCCTCTGCCGCGTCAGTTTCGCCTCCCTGGGCTCTTACAAGCGACACATGAAGAATAGCCTTCGACATGTTAGTAAAGAGCATTTAAGGTTTATTTGCGATGATTGCGATCGCCGTTTTGCTGATAAAACGAAATTACGCGATCATATCGAAGAGAAACACCTGCACAGGACTTACCAGTGTAAAATATGTTTGAAGGTATTTATGAACCGCGTGAATTTGGACCAACACATCAGGAACGTCCACAAAGGAAGgcctaataataaaatgtgccACCACTGTGGGAAGGGATTCCCTACGAAGGCCCAACTAGAGTCCCACATCCGAACGCACACGGGGGAGCGCCCCTTCATATGCGAGCTTTGCCCCACCACGTTCTCCCAGCACTCCAACTTGTACAAGCACACGAGACAGgtACATCTAAACATGAAATCGAAACGCTACCCAGCTGTGAAGAAGAGGAAAGAAGATCAGATACAGATGACGTTGGAACCGACAGACTTACCCATGGACTACCCCGTCGATATAGAGTTTAATATGTGA
- Protein Sequence
- MDILKEEISLQILCSACLCIGNQLYRVTDEKLKQYYLGALNEIPLYNMPTASPVVCLDCRGLLRRSYEFREQVKDSHRILMTYTSENLTECLLTDVSRPPRLKIQSNDSINIEPQIPSEKSVLKKHKKWKRDSRGTRSQRNDDQSEAIQALSGSSSPPPQPSGASLARHTGDTDYDIPLGDLKQVDTLADIDTELTAIITADTGPIKKKKEVRKKIGKLKKKQKKNGERHNDQSEAIPALSGSSSPHHSEVGPALRGTQEVYVKDELKIECYDSNRDTDYDIPLGDLKQVDTLADIDTELTAIITTDTGPIKKKKEVRKKIGKLKKKQKKNGEKVDIPNIVTIHMTHEEMVEERRKESNRDSYTNAEFKCESCILGFNYMKSYKKHLLARHSPSIGKYTCPICKTVLTTVESFSTHYKRHMKRYECSICQKRTIDLKSMQQHYYSTHEISLKQYKCSDCGKISNSVDSHRYHTDTHKSRLQCPDCDKTFRHRGGLLNHKLTVHEARNKFPCTHCGKVFRWKNSLKRHLPVHDEKNKPESSWQCCLCRVSFASLGSYKRHMKNSLRHVSKEHLRFICDDCDRRFADKTKLRDHIEEKHLHRTYQCKICLKVFMNRVNLDQHIRNVHKGRPNNKMCHHCGKGFPTKAQLESHIRTHTGERPFICELCPTTFSQHSNLYKHTRQVHLNMKSKRYPAVKKRKEDQIQMTLEPTDLPMDYPVDIEFNM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -