Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr20:16441562-16510276[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00069 0.039 14.4 3.4 1 23 314 337 314 337 0.96

2 25 0.0025 0.14 12.7 2.8 1 23 344 366 344 366 0.93

3 25 0.43 24 5.7 0.5 1 17 370 386 370 387 0.92

4 25 0.00023 0.013 16.0 4.6 2 23 397 419 397 419 0.97

5 25 0.0055 0.31 11.6 0.2 1 23 423 446 423 446 0.96

6 25 0.17 9.5 6.9 0.2 2 20 466 484 465 486 0.93

7 25 0.0036 0.2 12.2 4.5 2 23 510 532 509 532 0.96

8 25 3.1 1.7e+02 3.0 0.0 3 23 543 562 542 562 0.95

9 25 0.00011 0.0063 16.9 0.6 1 22 568 589 568 589 0.96

10 25 0.00083 0.047 14.2 3.3 1 23 941 964 941 964 0.97

11 25 0.0083 0.47 11.1 5.4 2 23 972 993 971 993 0.96

12 25 0.0011 0.062 13.8 4.2 3 23 1026 1047 1025 1047 0.97

13 25 0.2 11 6.7 1.2 1 23 1051 1074 1051 1074 0.92

14 25 2 1.1e+02 3.6 0.4 2 19 1125 1142 1124 1145 0.91

15 25 0.0045 0.25 11.9 3.4 2 23 1178 1200 1177 1200 0.94

16 25 7.4 4.2e+02 1.8 0.0 3 23 1214 1233 1212 1233 0.91

17 25 0.0036 0.2 12.2 0.2 1 23 1239 1264 1239 1264 0.94

18 25 0.00054 0.03 14.8 3.4 1 23 1635 1658 1635 1658 0.97

19 25 0.015 0.87 10.2 7.5 2 23 1666 1687 1665 1687 0.96

20 25 0.00066 0.037 14.5 4.5 2 23 1719 1741 1719 1741 0.97

21 25 0.2 11 6.7 0.8 1 23 1745 1768 1745 1768 0.93

22 25 0.88 50 4.7 0.6 2 19 1810 1827 1809 1830 0.93

23 25 0.016 0.89 10.2 4.7 2 23 1861 1883 1860 1883 0.94

24 25 9.8 5.5e+02 1.4 0.0 3 23 1897 1916 1895 1916 0.91

25 25 0.002 0.11 13.0 0.5 1 23 1922 1947 1922 1947 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00069	0.039	14.4	3.4	1	23	314	337	314	337	0.96
2	25	0.0025	0.14	12.7	2.8	1	23	344	366	344	366	0.93
3	25	0.43	24	5.7	0.5	1	17	370	386	370	387	0.92
4	25	0.00023	0.013	16.0	4.6	2	23	397	419	397	419	0.97
5	25	0.0055	0.31	11.6	0.2	1	23	423	446	423	446	0.96
6	25	0.17	9.5	6.9	0.2	2	20	466	484	465	486	0.93
7	25	0.0036	0.2	12.2	4.5	2	23	510	532	509	532	0.96
8	25	3.1	1.7e+02	3.0	0.0	3	23	543	562	542	562	0.95
9	25	0.00011	0.0063	16.9	0.6	1	22	568	589	568	589	0.96
10	25	0.00083	0.047	14.2	3.3	1	23	941	964	941	964	0.97
11	25	0.0083	0.47	11.1	5.4	2	23	972	993	971	993	0.96
12	25	0.0011	0.062	13.8	4.2	3	23	1026	1047	1025	1047	0.97
13	25	0.2	11	6.7	1.2	1	23	1051	1074	1051	1074	0.92
14	25	2	1.1e+02	3.6	0.4	2	19	1125	1142	1124	1145	0.91
15	25	0.0045	0.25	11.9	3.4	2	23	1178	1200	1177	1200	0.94
16	25	7.4	4.2e+02	1.8	0.0	3	23	1214	1233	1212	1233	0.91
17	25	0.0036	0.2	12.2	0.2	1	23	1239	1264	1239	1264	0.94
18	25	0.00054	0.03	14.8	3.4	1	23	1635	1658	1635	1658	0.97
19	25	0.015	0.87	10.2	7.5	2	23	1666	1687	1665	1687	0.96
20	25	0.00066	0.037	14.5	4.5	2	23	1719	1741	1719	1741	0.97
21	25	0.2	11	6.7	0.8	1	23	1745	1768	1745	1768	0.93
22	25	0.88	50	4.7	0.6	2	19	1810	1827	1809	1830	0.93
23	25	0.016	0.89	10.2	4.7	2	23	1861	1883	1860	1883	0.94
24	25	9.8	5.5e+02	1.4	0.0	3	23	1897	1916	1895	1916	0.91
25	25	0.002	0.11	13.0	0.5	1	23	1922	1947	1922	1947	0.94

Sequence Information

Coding Sequence: ATGATGAGCGAACTACAAATATGTCGTATTTGTCTCATCAAAGATGTAAAAGGCTACAAGATGGATCAATATCATCTCCGGCAATGTTACGAGCAAATAATGAGGGCAAAAGTGAATGACAGAGAAGGCCTCCCGCTATGGTTCTGCTATGAATGTTCCACTATGCTGAATAAGTTTGACAAGTTCAAAGATCGGTGCATGAAAGGACAGACAACTCTACGTCAGATGCTGTGGAGTAGGGgtATTTCATACGACACAGTGGGCATAATCAATAGATTCAGTGAAAACCTGATATCCCCTATTGGAGTCGTCATGACAAATCAACGTATCAAGACTTACATCTTCAAACACAGGTCTTCATCGAAGCTAAAACCTGAGAAATCTAAAACATACCCAGAAACTAAGTTTGAAAATGTTACATTGCCTTTTGAAGAGGATAAAATATTCCCAGTTAACCCTCTTgataaaaatactgaaattaaGGAGATTGACGAAATCAAGGATGAAGAAAAACCAGTCCCAAAAGAGGAAGACTATGACATGGACATCGGTGCAGATAACACTATAGAAAGTGACGAAGAAGACAACTTATTCTTATCTCAACACAAACTTGTACAAAAACCTCCAGACCCTAATAATGATATTGATATTGACAACataatgaatgaaataatgTCAAATGATGCCGAAATATCCAAACCGGAACCAGAATTAGCTCCGAAACCTAAAAACGGTAAGAAACCTGTAAAGAAAGGTTACAGAAATGTTTACGGTATATTGATACCAAAAACAGCATCAGACAAACCGAAAGCTAAGAAATTCGAAACTAAGAAGAGAGATATGAATCCGGAGCATTGGAAGAAGATTAATATGACAGAAGAAGAAGCGATACTGGAAGTGAAGCAGAGAGCTACGTCTGATAAGTTTTTGAAAGCCAATTTTAAGTGCCATGAGTGTTACAAGGGTTTCTCGAAGCTTGATATGCTAATGAGGCATGCTAAGCAATACCATGACGAGGCAGTGGGTTCGTTCCTGTGCCGGTTCTGCCACATGCGGTTCCCACGCAAGTGGGCGCTGACGCGGCACATGACGGAGCACTACATCATGTTCGAGTGTCGCCGCTGTGACATGCGCTTCAGAGAgaaatCAGCCCTTTTCCACGATGACGTTCATAACGGCGTCATAAGGAAATGCGAGCACTGTGGGAAGGAATTCGTGCACTCGTCGACGTACTACACACACCTGCGCATGACGCACCGGAGCAACCACATCTGCACGCTGTGCGGAGCGTCCTTCGTCAGCGAACTCGGCCTGCTGAAGCATAAACGGATAGCACACTACGAAGAAAAGGAGGCTGAGACGTCTAATAGTGCGCAGTCGGACGCGCAGGAGATATACTGCGACAAGTGCGACATCAAGTTCATGTCGCGGCGCGCCTACAACGAGCACCTGTCCAACTCCAACAACCACGGGGACGCGACCGAaaacATCAAAGCCAAGGATTTCAGACAGAAGAAAATTCCTACTACTTGTACACATTGCGGTCAAAACTTCCCGTCCCGGCAGGCGTACAAGAAGCACCACCTGACGGACCACAGCCACATACCGTTCGACGACAGAGCCATCTGCGAAGTCTGCGGCGTCTCGCTCTCGGCCGGGAGCGTGGCGCAGCACATGGTGACGCACACGGGCGAGCGGCCGTACCCGTGCGCGATGTGCGACAAGCGGTTCACGCAGAAGTCCGCAATGAAGATGCACTACAAAACCAGTATTTTCATGATCCTTACCAATATTACAGCTCATATTACTAGTGAAATCTTAGTGGGAGACCAAATAAAGATGAGTGATTTCAATGTATGTCGAATATGCCTCAACACGGACGTGAAGGGTTTTGAATTCAGCCAACACAGCCTCCGGAACTACTACGAACAGCTAACACGAAAAAAGGTGAACTCCAAAGACGTCTTGCCACAATGGGCATGCTATGAATGTGCTGCATTATTGCACAAATGCCACAATTTTAAGGAAAAATGTTTACGAGGGGAATCCGTGTTAAAGGAGATTTATCAAAAAGGAGATatcACCTTAGATACCATAGAATTGGTAAACAGAGAAAAGGAACACTTATTATCTCCAATACAACACACTATGAGAAACATAAGAGCTAAAACATACAACTTCAAATACAAAGAACGAAGAGACACTAAGCTAAAGattgaaaaagaaaagaaaacaacCAAACAAACAGTAGAGATACTGGATGTAGATAAGAATGATATAAATTTAGTAGTAATTGAAGATAAAATTTTAGATCAAGTAGAATTAGTAAAAAATGAAGATGAAATATTAATACCAGTAAATCAATCAACATACCCAGTAAAATCAGAAATAAACGAAAGCCTCACTGAAATAGATAAACATTTGAGTGATATATTTGGTATGGATAGTGATGATAGAGAAAACACAAACAATAATACTGGCGACACTAATAATGTAGACAATACTAATTATGACTCAGATATAGACTTTGAAATAGGTAACTCTAACCATGAAGATACATCAAGTGATGATGAAGAATCACTATCAGTATCCATCAAGAAAAGTGGCAAAGTAAAACGTAAgtcaaatcgtaaaacaaatgagaCGAAAGctaaaaaaacgaaaacagaAAGTGAGAGTGAAGTGCAGTTAAAGAATACAAGACCAAGAAAGCACTTCCTAAACCCCCAGTTTTGGAAGAAGATTACTTTAAGTGAAGAGGAGGCTGTAAGGGAATTTAAACAGAGGGAATTCAATAATGACTATTATTTGAGAGCAAAGTACAAGTGCCAGAATTGTTTTAAAGGTTTTTCAAAGAATGAGATGCTGGTTCGGCACTTGAAACATTGGCATGATGAGTCGTGCGGTCAGATGGAGTGCCGGTTCTGTCACATGCGGTTCCGACGGAAGCACCAGCTTGTCACACACATCCAAGAGCACCTTATTGTCCATCACTGCCTGCGATGTAACCTGCAATTCTCACGACTTAAAACGGCACTATTCCACCAGGAGCATCATAATGGCATCAAGAGAAATTGCAAGCATTGCGGGAAGGAGTTCAACCACCTGTCAACGTACTACACCCACGTGCGTATGGCGCACCGCAGCTCGCACGTGTGCGTGGCGTGCGGCGCGTCCTTCGTGTCCGAGCACGGGCTACTGCAACACACCAAGTTCAAGCACTTCGATAACCTCAAACAACTAGAAGAAGAGATCCGCAAGAGACGAGAGGCGTCCGGGAAGGCCGACTCGTCCGGCGAACAACAggctgcgcccgcgccggctgCGGAAACCCCCACCGCCCCAGCGCAGGCCCCGGACACGGAGGAGATATACTGCGCGAAGTGCGACATAAAGTTCATGTCGCGGCGCGCCTACAACCTGCACTTCTTCAAGTCTGACAACCACGACGACGGCGACGCGTACGCGGCCGTGAATAAAGACGGAACAACCGGCGGCCCAGGTTCCAACATTCGAGCAAAAATACCCACCACTTGTGAGCATTGCGACAAGGATTTCCCGTCTCGTCAGGCGTATAAGAAGCACCACCAAGCGGAGCACGGACACATCCCTCTCTATATCCCCGACGAGCGAGACATCTGCGAGATATGCGGCGCTTCTATACAATTGGGTAGCATATCGTATCACATGAAGTCGCACACGGGCGAGCGGGAGTTCGCGTGCCCCGCGCCCTCCTGCGGCATCCGGTTCACTCTCAAGGCGAACATGAAGCGGCACTACAACGTCAAACACCTCGGGATGCCGTATCCCAAGTATATACGGAGGACTCCCGGcagaagaagaaagaaaactCAGGAGATTCTCGAAAACGACTTCTCACCAATCGAGAACCAGACCATCATTAACATTTGGACCTTCTTCGCCCGATACAAGTGGAACCAGAAGACCAGCACGCAAAAGCTCAACTCCAAGGATGGATTACCGCAGTGGGTTTGCTACGAATGTGCAATGATGTTGCATAAGTACCACAAATTCAAGGAAAAGTGTCTACAGGGACAGaatgttttaaaacaaatttcattgaGAGGAACACTAACATATGAATCAGTTGCAGTTGTAAATAGATACAGTGAAAAGTTGATATCTTCCATAGGAGTTGCTGTAACAAATAAAAGAATCAGAACAACAACACTAAGATTCCAAcaacatttaaaacataaaatactcaGAGATATTTCAGTGAAAATTGACGAAAAACATAGAAATGCTTCCGTTGAAACAGTTGACATTAAAACTGAATCTAGTAACAGTGGTTTATTTAAAGAGAATGAGATAATTAGTTTACAAAACACTACTAACTTTTCTAATACTAGTGTTAACATAAACAATATAGAATTAGTCAAAAATGTAGAACAAGAAgaggttaaaaatattaatgaaattattaaCGTAACATGTCCAGATCCAATTAAGGATGAAATTGCAGAAAGTTACATTGAAAATCACCTAAACAGTATATTTCGCTCAAACGAACGACAAATTGACAAAGATAAATCAGAACAAAACACAGAAAATGTTAACATTGATTCCGGCAACAGCAACTGTGATTCAGACACTAATTTTGACATCACAGAACATGCAAATGATGTATCTAGTGAAGATGAATCTCTTACAGAAATCCTAAAAAGAAAAGTCAAAGCAAAACGCAAAACAACTCGATACAAAGAGCCgaaaacaaagaaaacaaaatcgGATACGGAAAAAGtggaattaaaaaatacaaaacctaAAAAGCACTTTTTAAATCCCCAATTTTGGAAAAAGATTAGTTTGAGTGAAGAAGACGCTGTGCGGGAGTTCAAACGTCGAGAATTtgataatgattattatttgaAAGCTAAATATAAGTGCCAGAATTGCTTTAAAGGTTTCTCGAAAAATGACATGTTGGTGCGGCATTTGAAACATTGGCATGATGAGTCGTCGGGCGCGGTGGAATGCCGGTTCTGTCACATGCGGTTCCGGCACCGTCACCAGCTTGTGAAGCACATGCAGGAGCATCTCATCCTCCACCACTGCCTGCAGTGCGACCTGCACTTCTCGCGCCTACAAGCAGCATTGGCACACCAAGAACACCACAATGGAATCAAAAGAACATGCGAACACTGCGGGAAAGAATTTAACCACCTGTCTACGTACTACACGCACCTGCGCATGTCGCACAAGAGCTCGCACGTGTGCGTGGCGTGCGGCGCGTCCTTCGTGTCCGAGAACGGGCTGCATCTGCACATCAAGTTCAAACACTTCGTCGAGTCTGAGCAGTTAGAAGAATGGATGCGGAAACAGAGGGAGGCTTCCAATAAGAAAAACCATGAGCAGCCGGGCAATGGCGATAGTACAATAGACGCCGCGGACACGGAGGAGATATACTGCGTGAAGTGCGACATCAAGTTCATGTCGCGGCACGCGTTCAACATTCACTTCTTCAACTCCAAGAACCATGACGACGACAGCGACGAAACTGATCTCAACAAAATTGGAGCTGGTCCGCGGCCGAATAGCAAACCGAAGATTCCCACATCATGTCCGCATTGTCACAAGGACTTCCCGACGCGCCAGGGCTACATCAAGCACCACAAGGCGGAGCACACACACATCCCCCTCAACATCCCCAAGAAGAGGGACATCTGTGAGGTCTGCGGCGCCTCCATACAGATGGGAAGCATCCAGTACCACATGAAGTCCCACACGGGGGAGAGGGACTTCGCGTGTCCCGCGCCCTCGTGCGGCATGCGGTTCACTCTCAAGTACAACATGAAGCGGCACTACAACGTCAAACACCTCGGGATACCCGCGCCCAAGTACGTCAGGAGaacgCCGGGcagaagaaaaaagaaaaatcagGAAATTCTAGAAAACGAATTCTCGCCATTCGTGAGAACGAAAACCGGTTACTTCCTGTAA
Protein Sequence: MMSELQICRICLIKDVKGYKMDQYHLRQCYEQIMRAKVNDREGLPLWFCYECSTMLNKFDKFKDRCMKGQTTLRQMLWSRGISYDTVGIINRFSENLISPIGVVMTNQRIKTYIFKHRSSSKLKPEKSKTYPETKFENVTLPFEEDKIFPVNPLDKNTEIKEIDEIKDEEKPVPKEEDYDMDIGADNTIESDEEDNLFLSQHKLVQKPPDPNNDIDIDNIMNEIMSNDAEISKPEPELAPKPKNGKKPVKKGYRNVYGILIPKTASDKPKAKKFETKKRDMNPEHWKKINMTEEEAILEVKQRATSDKFLKANFKCHECYKGFSKLDMLMRHAKQYHDEAVGSFLCRFCHMRFPRKWALTRHMTEHYIMFECRRCDMRFREKSALFHDDVHNGVIRKCEHCGKEFVHSSTYYTHLRMTHRSNHICTLCGASFVSELGLLKHKRIAHYEEKEAETSNSAQSDAQEIYCDKCDIKFMSRRAYNEHLSNSNNHGDATENIKAKDFRQKKIPTTCTHCGQNFPSRQAYKKHHLTDHSHIPFDDRAICEVCGVSLSAGSVAQHMVTHTGERPYPCAMCDKRFTQKSAMKMHYKTSIFMILTNITAHITSEILVGDQIKMSDFNVCRICLNTDVKGFEFSQHSLRNYYEQLTRKKVNSKDVLPQWACYECAALLHKCHNFKEKCLRGESVLKEIYQKGDITLDTIELVNREKEHLLSPIQHTMRNIRAKTYNFKYKERRDTKLKIEKEKKTTKQTVEILDVDKNDINLVVIEDKILDQVELVKNEDEILIPVNQSTYPVKSEINESLTEIDKHLSDIFGMDSDDRENTNNNTGDTNNVDNTNYDSDIDFEIGNSNHEDTSSDDEESLSVSIKKSGKVKRKSNRKTNETKAKKTKTESESEVQLKNTRPRKHFLNPQFWKKITLSEEEAVREFKQREFNNDYYLRAKYKCQNCFKGFSKNEMLVRHLKHWHDESCGQMECRFCHMRFRRKHQLVTHIQEHLIVHHCLRCNLQFSRLKTALFHQEHHNGIKRNCKHCGKEFNHLSTYYTHVRMAHRSSHVCVACGASFVSEHGLLQHTKFKHFDNLKQLEEEIRKRREASGKADSSGEQQAAPAPAAETPTAPAQAPDTEEIYCAKCDIKFMSRRAYNLHFFKSDNHDDGDAYAAVNKDGTTGGPGSNIRAKIPTTCEHCDKDFPSRQAYKKHHQAEHGHIPLYIPDERDICEICGASIQLGSISYHMKSHTGEREFACPAPSCGIRFTLKANMKRHYNVKHLGMPYPKYIRRTPGRRRKKTQEILENDFSPIENQTIINIWTFFARYKWNQKTSTQKLNSKDGLPQWVCYECAMMLHKYHKFKEKCLQGQNVLKQISLRGTLTYESVAVVNRYSEKLISSIGVAVTNKRIRTTTLRFQQHLKHKILRDISVKIDEKHRNASVETVDIKTESSNSGLFKENEIISLQNTTNFSNTSVNINNIELVKNVEQEEVKNINEIINVTCPDPIKDEIAESYIENHLNSIFRSNERQIDKDKSEQNTENVNIDSGNSNCDSDTNFDITEHANDVSSEDESLTEILKRKVKAKRKTTRYKEPKTKKTKSDTEKVELKNTKPKKHFLNPQFWKKISLSEEDAVREFKRREFDNDYYLKAKYKCQNCFKGFSKNDMLVRHLKHWHDESSGAVECRFCHMRFRHRHQLVKHMQEHLILHHCLQCDLHFSRLQAALAHQEHHNGIKRTCEHCGKEFNHLSTYYTHLRMSHKSSHVCVACGASFVSENGLHLHIKFKHFVESEQLEEWMRKQREASNKKNHEQPGNGDSTIDAADTEEIYCVKCDIKFMSRHAFNIHFFNSKNHDDDSDETDLNKIGAGPRPNSKPKIPTSCPHCHKDFPTRQGYIKHHKAEHTHIPLNIPKKRDICEVCGASIQMGSIQYHMKSHTGERDFACPAPSCGMRFTLKYNMKRHYNVKHLGIPAPKYVRRTPGRRKKKNQEILENEFSPFVRTKTGYFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -