Egri009755.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ectropis grisescens
Gene Symbol
ZNF296
Assembly
GCA_017562165.1
Location
chr31:1999071-2043992[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.16 9.1 7.0 0.8 1 23 457 479 457 479 0.94
2 11 0.00072 0.041 14.4 4.5 1 23 494 516 494 516 0.98
3 11 1.4e-07 7.9e-06 26.1 0.3 1 23 522 544 522 544 0.99
4 11 7.5e-05 0.0042 17.5 1.8 1 23 551 573 551 573 0.99
5 11 1.8e-05 0.001 19.4 1.6 1 23 579 601 579 601 0.93
6 11 1.9e-05 0.0011 19.4 1.2 1 23 607 629 607 629 0.98
7 11 1.6e-05 0.00092 19.6 1.1 1 23 635 658 635 658 0.96
8 11 3.9e-06 0.00022 21.5 2.5 1 23 664 687 664 687 0.95
9 11 0.00062 0.035 14.6 0.8 2 23 694 715 693 715 0.97
10 11 1.4e-05 0.00081 19.7 1.4 1 23 721 743 721 743 0.98
11 11 0.0026 0.14 12.7 0.1 1 21 749 769 749 773 0.91

Sequence Information

Coding Sequence
ATGAATGACGATTGCCTAATTTGCAACACCCGGCTGGGCCCGGGGAAGACTAAAATCGAAAATGTATTTCATGATGTGAATGTTATGCCCAGCAGTAACACCCTCCTGAGGACTCTACAAGAAATTCTGGACAAACCACTGAATGAGAACGAACTCCATTCCAAGTCAATGTGCAAGAAATGCTACCGGTCCTGCTTGAGCTACGACGAAAACATGTCCAAgATGAAGATCTTAAAGATGGACATGTGCGCTGAATTCAACACGACTATCCACACATCGCGAGCCACTCCCAGTATGCCTGTCCTCACCGAAGAGAAGCCTAAAACCCCTATTGtGGTACCAGCGTCAAAACTCAAACCGATTCCAGCTGACTTCCAACTGAACTTCGGTTCTGCGTTCCATCTCGGCCAGAAAGCTAAGATCGTCACCAAAACCGGGctcCCCTCAATAAACCTGAAAGTCACGATCGGTACATCGGTCCTAACGCAGAGCCTCAACACGACAACTGTCAAAATCTCTGCCCCGGAGACCAATGTGTCAACTGTCAACACGCTGTCAACTGTCAGTGTCAATGACATTACAAAGAAGTGGGACGTCAGCGTGCCGCAGGAGATATTCTCGTCGAATGAGGAAACTAGCCAAAGTGAGATGATTAAAACTAATGGTGATGAGGAAAATGAAATGGAAGTTGAAGAAGAATGCAATTTGCCAGTGGTATCAATGGCACCGGACGACAGTGACCCCTTGTTTGAGGGTATCAAGTCAGAGTCGGGGTCGATGCCTGAGTTCACGGAGTTTATAACGATAACGAAGGGCGCGGACGGAGCCGCGGGCAACTACGTGTTCGGGAAACTGAAGATATTCAACTCTAAGGACGGGAACGACGGACAACAAACGTTGGTAATAGACGGAGACAACGCTTCCGTCCTGGAGATGATGACCGGTCAGAAGGTGATATACGAGAACGGGGGGCTGTCGCTCGTGATGGAAAACGATGACGCGGCCGGGGACGCGGCCgaagacgacgacgacgacgacgatgatgatgatgatgacgatggaCAAGATTCCAATGAAGAGTCTCAGATAGAGCTTCAAGTGTCAGGCGACGAGGAGACTGCGAATGCCATCATAGCGGCCGCGCAAGAACAAGGTGGAGCGTTCATAAAAGTGGAATCAGGCGAGATGTACCGCGTGCAATCTGTGCAAAGCCACGATTCCAATCACGACGTGGCGAGCCTCCTCACACGACACGGGAACCAGTTTTCCTGCAACCTGTGCCAACGACACGACACCGCAGAAAAGAACAAGTTGCGAGACGCGAGCGCCATGATGCTCCACTTGAAGTCGGATCACGACGCCAAGGTATACCTCTGCCAGTTCTGCGGCAAGGGCATGAGGAAACGAACCGACTACACCACGCATTTAGCGGAGCATGCCCGAAAACCGCTCAACAAATCGTCAGCCCAGCGTCGTATCCACGAATGTGCGCTGTGTAACAAGTTCTACACGTCGCGCACGCTGTTACACGAGCACATGAACACGCACACCGGCGCGCGGCCCTACACCTGCGACGAGTGCGACAAGGCGTTCGCGAGCAAGTATTCGCTGCGCGCGCATCTCAAGATACATCAGGCTCGTCCGCGCCCGTTCCAGTGCGAACAGTGCAACAAGAGCTTCCTGTCGGCGCAGAACCTCAAACAGCACGAGAAGACTCACTCCGGCCTCAGGGAGTTCGTCTGCAAGTTCTGTAATAAAGCGTTCTCCACACAGCACAACCTGGAGATTCACAGCGTGGTTCACACCGGCGTGCGGCCCTTTTCCTGCCAGTTCTGTGTCAAGTCGTTCGCTCGCCGCGCCGAGCTGATGGACCATCGGAGAACGCACACCGGCGAACGTCCGTTCGAGTGCGAGCTGTGCGGCGCGCGGTTCGCGCAGCGCTCCAACCTGCACTCGCACCGGCGCGCCACGCACCTCAACGACAAGCGGCACCAGTGCCCGGACTGCCCCAAGCGGTTCAAGCGGAGGAGATTACTTCAGTACCACATAAAGGCGACCCACACGGGCGAGCGACCGCTCAAGTGCGAGGTCTGCCTGGCTTCGTTCGTGTACCCCGAGCATTACAAGAAGCATCTCAAGATACACAGCGGCGCGAGGCCGTTCGTCTGCGAGATCTGCGGCAAGTCGTTCAACTCGCGCGACAACCGCAACATGCACCGGTTCACGCACAGCGAGAAGAAGCCGTACGAGTGCCTCGCCTGCGGGCAATCGTACATGCGCAAGCGGTTGCTCATCGCGCACATGAACGCCACCGGCCACTTGGCTGAATCGATAGTGGTGAACCAGCCCCGGGTGACGAGGGTGCTCAAGACTGATGGAGGAACTACTCTGGTGAATGTGGAGAAGCGGGCCGAAGCAAATAGTGATAAAACTGAGACTGTGCTGCGGACATCGGGTAAGGTGGAGTCCCTGGACAAGCTGGCCCCCATCCTGCCGAGACAGGAGCCGCCCCGCCTGCTGCCCGACGTCAGCTTCATCGACCCCGAGAATTTAGAGACTGGTACGGAGCAGACCGTGGTCGTGAAGGAAATCAGCGCGACGGAAGTGCAACAAGACGCCGTGCATTACGGTACAGACGAGAACGGGTCCGTATTGCGGTTGATACAAGTGAAGCTCCCGGACGGGAACGACGGCTGGATGGCGCTCAACGACTGA
Protein Sequence
MNDDCLICNTRLGPGKTKIENVFHDVNVMPSSNTLLRTLQEILDKPLNENELHSKSMCKKCYRSCLSYDENMSKMKILKMDMCAEFNTTIHTSRATPSMPVLTEEKPKTPIVVPASKLKPIPADFQLNFGSAFHLGQKAKIVTKTGLPSINLKVTIGTSVLTQSLNTTTVKISAPETNVSTVNTLSTVSVNDITKKWDVSVPQEIFSSNEETSQSEMIKTNGDEENEMEVEEECNLPVVSMAPDDSDPLFEGIKSESGSMPEFTEFITITKGADGAAGNYVFGKLKIFNSKDGNDGQQTLVIDGDNASVLEMMTGQKVIYENGGLSLVMENDDAAGDAAEDDDDDDDDDDDDDGQDSNEESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVQSVQSHDSNHDVASLLTRHGNQFSCNLCQRHDTAEKNKLRDASAMMLHLKSDHDAKVYLCQFCGKGMRKRTDYTTHLAEHARKPLNKSSAQRRIHECALCNKFYTSRTLLHEHMNTHTGARPYTCDECDKAFASKYSLRAHLKIHQARPRPFQCEQCNKSFLSAQNLKQHEKTHSGLREFVCKFCNKAFSTQHNLEIHSVVHTGVRPFSCQFCVKSFARRAELMDHRRTHTGERPFECELCGARFAQRSNLHSHRRATHLNDKRHQCPDCPKRFKRRRLLQYHIKATHTGERPLKCEVCLASFVYPEHYKKHLKIHSGARPFVCEICGKSFNSRDNRNMHRFTHSEKKPYECLACGQSYMRKRLLIAHMNATGHLAESIVVNQPRVTRVLKTDGGTTLVNVEKRAEANSDKTETVLRTSGKVESLDKLAPILPRQEPPRLLPDVSFIDPENLETGTEQTVVVKEISATEVQQDAVHYGTDENGSVLRLIQVKLPDGNDGWMALND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-