Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr17:3703672-3716720[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.026 1.5 9.5 3.6 1 23 299 321 299 321 0.95

2 23 0.19 11 6.8 4.6 2 23 342 363 341 363 0.97

3 23 0.082 4.6 7.9 0.5 1 23 658 680 658 680 0.97

4 23 0.18 10 6.8 7.3 1 23 700 722 700 722 0.99

5 23 0.00023 0.013 16.0 0.1 1 23 739 761 739 761 0.92

6 23 0.0081 0.46 11.1 0.8 1 23 857 880 857 880 0.95

7 23 0.063 3.6 8.3 0.2 1 23 889 910 889 910 0.92

8 23 5.3e-06 0.0003 21.1 2.1 1 23 914 936 914 936 0.98

9 23 8.9e-07 5e-05 23.6 0.4 1 23 942 964 942 964 0.97

10 23 5.1e-07 2.9e-05 24.3 0.2 1 23 970 992 970 992 0.98

11 23 1.1e-06 6.2e-05 23.3 3.1 1 23 998 1020 998 1020 0.98

12 23 5.5e-05 0.0031 17.9 0.6 2 23 1026 1048 1025 1048 0.96

13 23 0.095 5.4 7.7 6.2 1 23 1057 1080 1057 1080 0.97

14 23 0.0011 0.062 13.8 0.6 3 23 1091 1112 1090 1112 0.94

15 23 0.00087 0.049 14.1 2.3 1 23 1120 1143 1120 1143 0.96

16 23 0.00022 0.013 16.0 3.8 1 23 1152 1175 1152 1175 0.95

17 23 0.00084 0.047 14.2 0.1 2 20 1179 1197 1178 1199 0.93

18 23 2.1e-05 0.0012 19.2 0.9 2 23 1203 1225 1203 1225 0.97

19 23 4.3e-05 0.0024 18.3 1.7 1 23 1234 1256 1234 1256 0.98

20 23 0.0064 0.36 11.4 6.5 1 23 1263 1286 1263 1286 0.97

21 23 0.0047 0.27 11.8 1.1 2 22 1291 1311 1290 1311 0.94

22 23 6.6 3.7e+02 1.9 0.2 2 9 1320 1327 1319 1338 0.68

23 23 0.00028 0.016 15.7 0.9 2 23 1344 1366 1343 1366 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.026	1.5	9.5	3.6	1	23	299	321	299	321	0.95
2	23	0.19	11	6.8	4.6	2	23	342	363	341	363	0.97
3	23	0.082	4.6	7.9	0.5	1	23	658	680	658	680	0.97
4	23	0.18	10	6.8	7.3	1	23	700	722	700	722	0.99
5	23	0.00023	0.013	16.0	0.1	1	23	739	761	739	761	0.92
6	23	0.0081	0.46	11.1	0.8	1	23	857	880	857	880	0.95
7	23	0.063	3.6	8.3	0.2	1	23	889	910	889	910	0.92
8	23	5.3e-06	0.0003	21.1	2.1	1	23	914	936	914	936	0.98
9	23	8.9e-07	5e-05	23.6	0.4	1	23	942	964	942	964	0.97
10	23	5.1e-07	2.9e-05	24.3	0.2	1	23	970	992	970	992	0.98
11	23	1.1e-06	6.2e-05	23.3	3.1	1	23	998	1020	998	1020	0.98
12	23	5.5e-05	0.0031	17.9	0.6	2	23	1026	1048	1025	1048	0.96
13	23	0.095	5.4	7.7	6.2	1	23	1057	1080	1057	1080	0.97
14	23	0.0011	0.062	13.8	0.6	3	23	1091	1112	1090	1112	0.94
15	23	0.00087	0.049	14.1	2.3	1	23	1120	1143	1120	1143	0.96
16	23	0.00022	0.013	16.0	3.8	1	23	1152	1175	1152	1175	0.95
17	23	0.00084	0.047	14.2	0.1	2	20	1179	1197	1178	1199	0.93
18	23	2.1e-05	0.0012	19.2	0.9	2	23	1203	1225	1203	1225	0.97
19	23	4.3e-05	0.0024	18.3	1.7	1	23	1234	1256	1234	1256	0.98
20	23	0.0064	0.36	11.4	6.5	1	23	1263	1286	1263	1286	0.97
21	23	0.0047	0.27	11.8	1.1	2	22	1291	1311	1290	1311	0.94
22	23	6.6	3.7e+02	1.9	0.2	2	9	1320	1327	1319	1338	0.68
23	23	0.00028	0.016	15.7	0.9	2	23	1344	1366	1343	1366	0.95

Sequence Information

Coding Sequence: ATGCCTGGAAGTCGAATTTACAAGTACAATGATGTAAATCTTCAAAAAGCAAAAGATCTATTCAACGCCCACAATAAACGAAGACATGAAACCAAATTATTGAATATTTCAGAAGGAGATGACAAACCAGCTAACAACTTAAAAAAGAGAAAGTTATTGGAATATGATATAATGGATGAAAATCATGATAGTGTAGATATTAATGATGAAATTATAAATGATAATGAAAAATATGCAGAAGATGTTAAGATGCACAATATTGAAAAAAACTCTGATGACAGTGATAACATCACAAAAATTGCTGAAAAACACAATGAAATGATGattaaaacagaaaaaactAAAGATGGTATTGATATCATTGTTGAGAATATTATAGATggtaatgaaaatgaaaacattacaaaaagtaAGGAAAAGGTGCTAAATCATAATGAAACAATGTCAAATAGTAATGAACATTCCTTTGAAGATAATGAACTGATAACAATAAGAGACTTATtggataataataaaagtatccCTAAACCTAATAAAACACTTATTAATGCAGAAAACACAGATAAACTTACCAACATTAGTAATAGTGAAACAATGAGTACAGTAAATAAACATAATGAAATAGATGAAAATAAGAAGATAGAAAACAGTAAGATCCCAAATCATAATGAGGCATGTCATAAACAAacatttgaagaaaataaacagaATTCAGAAGGAGGCTTGTCgaataataatgaaaatgtcACTGAACCTCATGATagatttatacatacatatgaaGATAACAcagataaaaatacaaacaatgaTAATTCTGAAAAAACAATTACAGGTAATAATGAAACAGATGaagaaaataatgaattagTTGAGAATGAATCAAATGAAGACTATTTGTGTTCCTTCTGCACcaaaaaatttaatacacaATGTGACTTAGATGAACACTGGTTGAAACATGTCCTACAACTGGAACATatGCAAAGTTGCTGTGTAAATTtggatcgagttaaaattttaaaatgtgattCATGCCCAAGATGTTTTTTGgaaaagtcaaagttaaaaatgCATACGAAAAAACACTTTTTGGAAAGAAAAAATAGGGAACAAACCATTAAGAATATGTTGAAAATTAAGcaagtgtcAAACaaggtaaaaaataaacacattacaaTAATCTCTAAGAAGAGTAACAAGGAAAATAAAAGTGACAAAAAGAAAGTCTTGGCAATGGCCGAAAGTAAAACATCAAATCATGGAACAAAAATGGGTGACAGTGAAATAATTACTATTGAGGAGAATGAACAGAgcaaaataattgaaaacaaaagagaTACTACGGAAAAACATGTGTCACATAAaagaaataatacatatttaactAATGGGTTAGATGGGAatgacaataataattataataaagccAAACGTTTTAAAAAAAGCGAACTGGAAAATAACAACATAGATGAAATTATTGAGTTggattgtaataaaaataacgaGGAAGGAGAACTTTctaatgaaaaagaaaatgaaCAGAGAGATAGTGAAAGCAATGAAACCAATGatctgaataaaaataaaagagatgATAATACAATGGATATTAACAAAACTCACAATGTAAACGAAAaagaattaaatgaaataagtgAGATTCAAATGAAAAATCAAAGCAAAGATAATGTTGAGAGAGCTTATAAGGTTGAATGTGGTGATCCAAATGTTACATTGAATAAAAATGGTCATAGTGTTAGGGCTGGAAGTGAATGTAACATAATTAATGAAAATGGAATAATTGGAATAAATCATGACAAAGAAACAAATGAATCAAATAATGTTATTGATGtgaatcaaattatcaaaacagAAGAGATAGAAACTAAATCTGAACTGATTATTggaaacgaaaacgaaattcATCAAATTGAGATAACTATAGATATGAATGCACCAGAgaagaaatattcatgtggGTTATGTACCAAAaaatttcttacaaaagtaGAACTTGATTATCACTGGAATGTTCATATGCCAATATTAAAACATATGGAAAGTTGTTCTGTGCAGTTGAATCGAtctaaaatattcaaatgtGAATTTTGTCATACCTGCTTCCTTTATTTAAATAAGCTGACCGCGCATCTAAGGAAACATTTTCAGATTAATCCGCTGAAAACTAGGAAGGATGATGAAAATAAGCCCTACAAGTGTGAAGACTGCGGATGGGGATTTATGAAGCGAAGTACTCTGGAGGCTCACTCAGTGCTCCATCAACCGTTCGCTCACATCTGCGAGTGCGGCATCGGGTACTACCTTAAATGCGACCTAGACGCCCACCGGCGCCTCGTCCACCCAAACTCGGCACCCCCAAAACAAATAACCCCCAAACAAGACGCCACACCAAAACCGAAGTCCAATCCAAACCAAAACACAAACAAAGGACCCAAACTCAGACCCACCCTAACTTCAAAAcctaacaacaaaataaaacctagaaAGACCggatacaagaaaaaaatattacaaacccATTTGAAAAAGGACGAACACGGCAATTATAGTTGCACAATTTGTACGAACACTTATACGAGCATCGACGGTTTGTGGAAGCATTTATGCGGGGACCATGCCCACAAAAATGATGATGGCACATACGAGTGCAATATTTGTAGCAAAACTGTGAAGTACGCTGCTTTGAAGGTTCACATTTTCGGTCATCTGAAACCTTACACCTGTCATGTATGCAATAAAAGCTATACACAGAAGGGGGCGCTCAATTTACATCTCTTGCGACACACTGGCAACAAATCCTTCGCTTGTGACATCTGCGGTAAAGCGTTTTACAATGATAGCAATCTCAGGCTTCATACCAGGACACATACGGGAGAAAAGCCGTATGAATGTTGGCAGTGTGGAAAAGGATTCAGCGACCCGTCTGCTTTCAAACGTCACCTAAACATACATACTGGGCTGAAGCAACACAAGTGTGAAATGTGCGGAAAAGCCTTCTGCGATCCGTCTGCGCTATATAGACATACCCGCATGCACCAGGGGTTTCAGGTGCCGTGCACGGAATGCGACAAATCGTTCAAATCTCTACAAAGTATGCGCGATCACTATAAAACTATCCATACCATAATGACAGATAAAGACAAATTTGAATGCGACCACTGCTGTCGACAATTTACACGAAAATTGTATCTGATGAGTCACATGATAAGGACACATTTAAAGCCCAATCCTGACGACGCTCGTGACTGCGAAATTTGCGGTAAAAAGTTTCCAAATAAATGGGCTGTGAAATCACACGTAATGCACACTCATCTTAAACTCACTCATCTTAGACATACATGTGGTATATGTGGTGCGCGTTTTATATACGAGCATGCACTGAAACGTCACAAAATGAAATTACACGGACCCaaactaaagaataaaaaatttgAATGTGATTATTGCCATAAATGTTTCTTTGACAAATCATTGCTAGGAAACCACATCATTCTAAGTCATTTAGGCATAAAATGTGAAATATGCGGTAGATCATTCTCCACATCTGTTTTTTGGAAAAACCACAAAATAGAAGGCTGCAGACGTTGCACATTTTGTGGAACGGCTTTCCCAACTCCGTCTCAGTTGGAACATCACTTAATCACTAAACACATGCCAAAGAGAGATCAGCCGAGGCATGAATGTGAATATTGTGGCAAGGAATTCCCACTTTTAATGCAATTGCAAAAACATACCAAAACACATACGCAACCTGCAGACGCTTTTAAGTGTCATCATTGCAGTAAAACCTTCTCATACAGACAGGCGATTGTGACCCATATTTTTACTAAGCATATGGTGAGCCTGTATTGCGATGTTTGTTTCAAAAGATTTTACAGGGAAAGTGAGTTTACTGAACACAAACGCAGAGCTGATTGTACCTCACGTTATACTCAATGTGATATATGCGACAAAAAGGTTTTGGACATGAAAGGACATCTCTTGACCCACGGACCTAGGAGAGTTCAATGTGATATTTGTCATGCCAAGTTCACTAATAGGGGAACCTTAATTAGGCACAATCGACTAGTGCACAAATTTTACTGA
Protein Sequence: MPGSRIYKYNDVNLQKAKDLFNAHNKRRHETKLLNISEGDDKPANNLKKRKLLEYDIMDENHDSVDINDEIINDNEKYAEDVKMHNIEKNSDDSDNITKIAEKHNEMMIKTEKTKDGIDIIVENIIDGNENENITKSKEKVLNHNETMSNSNEHSFEDNELITIRDLLDNNKSIPKPNKTLINAENTDKLTNISNSETMSTVNKHNEIDENKKIENSKIPNHNEACHKQTFEENKQNSEGGLSNNNENVTEPHDRFIHTYEDNTDKNTNNDNSEKTITGNNETDEENNELVENESNEDYLCSFCTKKFNTQCDLDEHWLKHVLQLEHMQSCCVNLDRVKILKCDSCPRCFLEKSKLKMHTKKHFLERKNREQTIKNMLKIKQVSNKVKNKHITIISKKSNKENKSDKKKVLAMAESKTSNHGTKMGDSEIITIEENEQSKIIENKRDTTEKHVSHKRNNTYLTNGLDGNDNNNYNKAKRFKKSELENNNIDEIIELDCNKNNEEGELSNEKENEQRDSESNETNDLNKNKRDDNTMDINKTHNVNEKELNEISEIQMKNQSKDNVERAYKVECGDPNVTLNKNGHSVRAGSECNIINENGIIGINHDKETNESNNVIDVNQIIKTEEIETKSELIIGNENEIHQIEITIDMNAPEKKYSCGLCTKKFLTKVELDYHWNVHMPILKHMESCSVQLNRSKIFKCEFCHTCFLYLNKLTAHLRKHFQINPLKTRKDDENKPYKCEDCGWGFMKRSTLEAHSVLHQPFAHICECGIGYYLKCDLDAHRRLVHPNSAPPKQITPKQDATPKPKSNPNQNTNKGPKLRPTLTSKPNNKIKPRKTGYKKKILQTHLKKDEHGNYSCTICTNTYTSIDGLWKHLCGDHAHKNDDGTYECNICSKTVKYAALKVHIFGHLKPYTCHVCNKSYTQKGALNLHLLRHTGNKSFACDICGKAFYNDSNLRLHTRTHTGEKPYECWQCGKGFSDPSAFKRHLNIHTGLKQHKCEMCGKAFCDPSALYRHTRMHQGFQVPCTECDKSFKSLQSMRDHYKTIHTIMTDKDKFECDHCCRQFTRKLYLMSHMIRTHLKPNPDDARDCEICGKKFPNKWAVKSHVMHTHLKLTHLRHTCGICGARFIYEHALKRHKMKLHGPKLKNKKFECDYCHKCFFDKSLLGNHIILSHLGIKCEICGRSFSTSVFWKNHKIEGCRRCTFCGTAFPTPSQLEHHLITKHMPKRDQPRHECEYCGKEFPLLMQLQKHTKTHTQPADAFKCHHCSKTFSYRQAIVTHIFTKHMVSLYCDVCFKRFYRESEFTEHKRRADCTSRYTQCDICDKKVLDMKGHLLTHGPRRVQCDICHAKFTNRGTLIRHNRLVHKFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -