Egri008315.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr24:801149-825400[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.2e-11 2.7e-08 33.7 1.6 3 44 52 94 50 94 0.95 2 6 5.9e-12 7.2e-09 35.6 0.4 2 43 134 176 133 177 0.97 3 6 4.8e-05 0.058 13.4 1.3 12 43 221 251 217 252 0.91 4 6 1.5e-09 1.8e-06 27.9 2.9 2 44 294 335 293 335 0.95 5 6 2.4e-13 2.9e-10 40.0 0.7 1 43 373 414 373 415 0.97 6 6 3.9e-07 0.00048 20.1 0.2 3 44 439 479 437 479 0.96
Sequence Information
- Coding Sequence
- ATGGATGTAGATGAAGAgaattgtgaagaaaccgacgcAGAATCTGTCGCGGACGAAGTTATTATCTCCGAGAATGTTCAAGATGAGACATCAGTTCAAGAAGCAGATACGCCGGCGCTGTCTGACCGCAGTTACCGGATCAACAGATCTATATTATGGAATTTTTACAAAAGAATCCCGCCATATTCGAAGGGGCTGGCGAGGTGCCTGGTCTGCCACGAAGTAAGGTCTCATAAGTCCAGTTCCAGTAACCTGAAATCACATCTCAAGAGTAAACATCCCAGGGCTCACAGACAGATGTTGGAATTGATCGAGAAAGCGAGGTTAGACCCCACCTGCAAATCATACAGAAATGCCACCGAAGATGCGCCAGATACCGATGGATCAAAGAAGTCCGGCAATGTGTGGCAGCATTACGTGCGTGTGCCGCCGGCGGCAGCGAAGATGGCGCGTTGCAAGTACTGCTACGAGCTGCGCTCCTACAGGACCACCACCGGCAACCTGAGGCAGCACCTGGCGCGGAAGCACCTCGACTTCCTGGGGGAGGACCGGGAGATGTACTTGAAGATGACGCCCAGaTGCAAAACGTACGAGAAACGAAAGAGAGGTCAACTCTTGGACATTTTGGGGATGCCCGACAACGATGACGTAAACAATACAACGAACAGTAACGTGGCGAAATGCAAGCTCTGCAGTCAAAATATGAGCTTTACGACGACGGCGGACCTGAGGTATCATATTTTGAAAATGCACGGCAACCATCAAACCGTTCAAGACATTGATAACGCCGGAGACGAAACCACAGATGgagaaaaaaaacagaatcCCGTAAACGCCAACGTTCAGACAACTAAGAGAAATAAGTATGAGAGACGAAGCAGGAACTGGAAATTCTTCACGCTGGTAGACATGGCCAATAAGATAGCCAAGTGCAAGACTTGTCACCTCAACTTTCGTTTCACGACTGTCAGTAATCTTAAGAAACATATTAAGATAAAGCATCCGGAGATTGACATGTCTGTGGATCCTGGGTCGCCGGAACATTCGCTGATGTCAAGTGATATCTCTGAAACGAAGACTACTAAATCGATAAATACCCCTCAACAACATTTCCGGAGTCGATTGTGGAAACATTTCGACCCCGTCCCTGGCTCGGAGAAGATGGCAACCTGCCGGCTCTGTCTCAAGGACTTCAATTACGCTTGCCTCTCCAACCTGAAGAAGCACCTGATAAGGAAGCACGGGAACGGAATGAGCTTCTCGGGAGACGAATCTGATTATATGGAGGAAGTTGTGATCGAGCAGAGTGAAGGAGTATGGAGCTACTTCAAATGCTTGTCCCAGGACCTGAAGATAGCCTCCTGTCTCGTTTGTAAAAAGAGGGTAGAATTCGAGAATGACGAAGAACTAAACAAGCATTTGAAGAAGAAGCACCCTGAACTGAACACTCCTGCTGCTGCTACGCTAAAGAAACTAATGATAACCAAAAGCGGAGATATTTACGAGATCGACGAGGAGGTCGCTAAACAGGAGCCGATAGAGGTCCCAGATGACAATGACAGTGACGGCTGGCCGTACGATAACGACCAGgatGCTCTGGACACGTCCGAATACTTAGACGAGACTATTTACGCAACACAATCCCCGAAACCAGCAAAGAAGCGACGCTTGAGCCGCCAAATACTCTCAAACAGCCCCAAGGGAGAACAACGCATTCCAGCAAGACAAAAAAGTCCAGAAAACGAAGTGGATTCACTAGATATATTTGGAAAATACATCGTggcactattaaaaaaaaactgccgaAACGAAAATCGGATCGATTACAAGCCGATATCGTTAAACAAATCATGGACGCTCAAACTGATACCGATACTCCAATACGTGATACTAATATTAGTTTTAGTGCGGACGATGCGCGCGTCTCTAGTAATAGTGAGGTGCGAGTGA
- Protein Sequence
- MDVDEENCEETDAESVADEVIISENVQDETSVQEADTPALSDRSYRINRSILWNFYKRIPPYSKGLARCLVCHEVRSHKSSSSNLKSHLKSKHPRAHRQMLELIEKARLDPTCKSYRNATEDAPDTDGSKKSGNVWQHYVRVPPAAAKMARCKYCYELRSYRTTTGNLRQHLARKHLDFLGEDREMYLKMTPRCKTYEKRKRGQLLDILGMPDNDDVNNTTNSNVAKCKLCSQNMSFTTTADLRYHILKMHGNHQTVQDIDNAGDETTDGEKKQNPVNANVQTTKRNKYERRSRNWKFFTLVDMANKIAKCKTCHLNFRFTTVSNLKKHIKIKHPEIDMSVDPGSPEHSLMSSDISETKTTKSINTPQQHFRSRLWKHFDPVPGSEKMATCRLCLKDFNYACLSNLKKHLIRKHGNGMSFSGDESDYMEEVVIEQSEGVWSYFKCLSQDLKIASCLVCKKRVEFENDEELNKHLKKKHPELNTPAAATLKKLMITKSGDIYEIDEEVAKQEPIEVPDDNDSDGWPYDNDQDALDTSEYLDETIYATQSPKPAKKRRLSRQILSNSPKGEQRIPARQKSPENEVDSLDIFGKYIVALLKKNCRNENRIDYKPISLNKSWTLKLIPILQYVILILVLVRTMRASLVIVRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -