Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_017562165.1
Location
chr04:22463991-22467387[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.023 4.3e+02 0.7 5.1 43 106 107 171 86 221 0.59
2 3 5.6e-102 1e-97 326.4 7.8 1 217 329 537 329 538 0.94
3 3 0.071 1.3e+03 -0.9 1.9 46 118 751 823 715 826 0.54

Sequence Information

Coding Sequence
ATGGGAATTCTAACGCAAAGACGTGGTATCACCGCTTTTGTAAAAGGTGCGCGCATGCGCGAGTCACAGGCCACGCGGGGCGGGGGGTCGCAAGGCCGGGGCGCGGCGGGCGGGGCGGGGGCGACGTCACGTCGAACAACGCAGCCCATACCCTACCAAATTGAGAAGACCATGATGCGCGCGTTCCCTCGCGTTCTCACATGCGCACTTAACTCCATCGGTTATCAACTTGCCTGCGTCGTCGCTCGGCTCGAGTCGTCCAACGCGATTACGCGAGGTGGGACTCATAGCACACGAGTAAAAGTGGCCCCTCTATCGCGCTCCGCTACAATGGAAGCCATGGAAAACTCTACAGCTCAGATAAATATGCAGCCCCAAGACAAACAAGAAACAAAATGCAGCCAACAAGAAGAAACAAAACCTACTCACGCAGAAGAGGAATGCTATCGTATGATAAAAGATGACAAAAGTGATAGTGACGCTAATAGTGATGACCTTAGTTCTAACGACGAACAAAATAACGTAGTCAATAGTGGTAACTCTCAGTTTTATGAGAGTAGTGACAGTAAAGATGATTATGCAGTGAAAATAGAAGACAATGATACTCTCAGTGATATAGATGATATCAAAACGGATAGTGCTTCAGCGGACAGTGAAGATTCCGCACTTGGCAGCCTGCCACCGGATACCCTTGCCACGGATAGAGAAGAAGAGCCACAAGACCGTTCTGAGGGAAGCGACTCTGGTATTGGATCAGAGACATCAGAGGAGATCAAGTTACCGAGCTTTAATATAGCACTGCCATGCACAAATAGTCTAAATTTATTATCTAGTACAGAAAATGTAAATCAAAACTCAGGTAGCAATATAACAGATAACGATAATGACGAAAAACGGCATAAATCAGTTGCACCGATAAAAATTCCAATAAAGAGCAATCTGAAACGGAAACGCAATGAAAATGATTCTGAACCGCAGGCCAAGAAAAGGAAAGAAGGAATTAAATTCGAAAATGTTACAGTTTTTTACTTTCCACGATCTCAAGGATTTTCTTGTGTGCCATCGCAGGGTGGTTCTACGTTAGGAATGGAATGGGAACATTCTCATGTACAAAAATTTACACTAGCTGAGCATGCGTTAGAACAAAAGAGATTACATAGACAAATATTACAACAGTTGAAAAGTGAGCGTCATTCTTTACAAGGTGCATCGCTTTCGTCTAGTGAAGACAGCGACACGGAAGAAGAAGCTAGTGACATTTCAGAATCGGAACTAGATTTAGACAGCTACTACTTCTTACAACCGGTACCTACGCGACAAAGAAGAGCTCTCTTACGTGCCGCTGGTGTTAGAAAAATTGAAAGTTACGAAAAAGATGAATGTAGAGACATTAGAACATCGCGCGAATTTTGCGGATGCGCCTGTAAAGGGTCTTGCAAACCAGAGAGTTGTTCATGCAGTTTAGCAGGTATTAAATGCCAGGTTGATCGATTGAACTTCCCTTGCGGATGTACTAGAGACGGGTGCGCCAACGTCACAGGAAGAATTGAATTTAACCCAGTCCGCGTCAGAACACACTTTATTCATACTTTGATGAGAGTTGGCCTTGAAAGAAAGAATGAAGAGAATCACGAAGCCGCAAAAAAACGTTGGGCTGAAGCACACAACCCTAATTCTGTCCCGAACACTTTGCATGAAAGAGATCGATGCAGAATCAATCAAGAAGACGGTTTAGTGAGAGACGTGAATTTAACACCGAGAGTAGAAGTAGAATCGTGCGTAAATGCGGGAAATTTCAGTAACATTCACTGTGATATGAGCAGTACTGCTCAAAACGTCTCGCAAGATGGCGTATCTTACGGGTACAGAAATGAAGCTTGCGAAAGCAGAAATATTAGCGATGGTCACTTGCAATTCGATACAAATGCTCATCATAACCAGAATGCACCGTATACATCCAACATACTACAGGGCAAAGGGCCTCCTTACGGGGCAACGGGATCGATGGGATACAACACAATGGCAAACAATATGCAACGGTTCCCATGTGACCTCAATTACTCTTACGACCAACATAACGACAATCATCATTTCAAAGGACTGCAAAGTTTCTCAGCAAGCAGTTTTGAAGAGTTCGCTCATAACTCTCAGATGTCGATGTTTAGCCACTACGGTCACATGTACGGGCCCGAGTACTTACATAAACCGAGTACGTCGATGCAAGACCATAGTGCTATGCATTATCATAATACACCACAGAACCATTACGATATGTACAAAAACACAGAGTgtgtaaataatgaaatgaaaagagATTACAGTAGTATGATGACGATGCCATATCAAAGTAGTAATAAGATACAAACGGCTGAAAATGATGAGAACTGGTTCAGTCACAATACGCTTCTTAACTTGGACCATAACGATCAGAACACACAAGACGCTGTGGAGGTGCAGCCTCAACCAGCTGAAGTCGCCGGAAGCGCAACTACTGAAACTACAGAAAATTTTGGTGAACTtatcaaaaaaaactatggTAGAGTCTGTTACTGTGTAGATGATGTAATTGTTGTCTTTTAA
Protein Sequence
MGILTQRRGITAFVKGARMRESQATRGGGSQGRGAAGGAGATSRRTTQPIPYQIEKTMMRAFPRVLTCALNSIGYQLACVVARLESSNAITRGGTHSTRVKVAPLSRSATMEAMENSTAQINMQPQDKQETKCSQQEETKPTHAEEECYRMIKDDKSDSDANSDDLSSNDEQNNVVNSGNSQFYESSDSKDDYAVKIEDNDTLSDIDDIKTDSASADSEDSALGSLPPDTLATDREEEPQDRSEGSDSGIGSETSEEIKLPSFNIALPCTNSLNLLSSTENVNQNSGSNITDNDNDEKRHKSVAPIKIPIKSNLKRKRNENDSEPQAKKRKEGIKFENVTVFYFPRSQGFSCVPSQGGSTLGMEWEHSHVQKFTLAEHALEQKRLHRQILQQLKSERHSLQGASLSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIESYEKDECRDIRTSREFCGCACKGSCKPESCSCSLAGIKCQVDRLNFPCGCTRDGCANVTGRIEFNPVRVRTHFIHTLMRVGLERKNEENHEAAKKRWAEAHNPNSVPNTLHERDRCRINQEDGLVRDVNLTPRVEVESCVNAGNFSNIHCDMSSTAQNVSQDGVSYGYRNEACESRNISDGHLQFDTNAHHNQNAPYTSNILQGKGPPYGATGSMGYNTMANNMQRFPCDLNYSYDQHNDNHHFKGLQSFSASSFEEFAHNSQMSMFSHYGHMYGPEYLHKPSTSMQDHSAMHYHNTPQNHYDMYKNTECVNNEMKRDYSSMMTMPYQSSNKIQTAENDENWFSHNTLLNLDHNDQNTQDAVEVQPQPAEVAGSATTETTENFGELIKKNYGRVCYCVDDVIVVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00895953;
90% Identity
iTF_00634492;
80% Identity
-