Basic Information

Gene Symbol
-
Assembly
GCA_017562165.1
Location
chr03:1700219-1704276[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 6.3e-09 8.3e-06 25.9 0.1 1 46 250 297 250 297 0.90
2 4 1.2e-06 0.0015 18.6 0.0 3 46 305 352 303 352 0.94
3 4 2.7e-13 3.5e-10 39.8 0.0 1 43 356 398 356 400 0.98
4 4 2.3e-05 0.029 14.5 0.0 3 45 408 452 406 453 0.93

Sequence Information

Coding Sequence
ATGGAACCCGCAAATATAGAGGATAGTGAAACCAGTGAATCAGACGATAATGCAGATATTCTTGTGGCGGAATATCTAAATGACACCCGGGTGGAATCGGTACTGGCTACAAGAAGACATCAGGAGCCGGCGTACACTCTAGAGCAACTCGACGATATCAATCTATACAAAAATGCTATAGCTCTCAACAGGGAAACTGaagctaaatataaaaaacttgaAGATTCTCTCACGAGAATGCTCACAGAAGTACGTAAAAGGCTCAAAGATAATGAAGCAGCCCTGTTGAAGCACTCTCATAATCATAATGAAGGAGAATACAACTATTTCAGATGTGGTAAACCCTACTTTAAAGACTCATCAAACTTCTGCCCTCCTGATAACGAAGACACTATTATGATGAGACAAAGTGAAATGTATGACTTTTCTCATGTAGCTTCAGTCCCTGGTTGGACGATAAATGACAAAGGTGAGTTAGTAAATGCACTCCTGGAAGTATCACGAGATATTAAAACGAGTGAACTGAAATCTGAAATTGCTAGACTGCGTAAagacaataaaaatttaatgaaaatagccAAATTAGAACAAGAAATCAAACACCTGAATAAGAAGACCCTGGCTGAGATAGCATTGCCAATAGAGCAAGAGTATGATTGGGAACAACTAGCTGATACCATGAATCAGAGGCACACTGCACAAGAATATAGAGCTTTGTGGAAGCTATTCTTCCATCCATCTATAAACAAAAGCAGCTGGACCAAACCAGAGCACAAGGAATTGCAGAAGATTGCATTTGCAAACTACATGCAAGACTGGGATTCTATTGCCAAACAATTGAATACAGGCCGGACAGGGTATCAGTGCTTTGTCTATTACCGAACTAATTTGACCAGCAGCCCTTCTAACCGTAAATGGACGCCAGAAGAAATAGAATATCTACAAAGGGTGGTTGATTACTTCAGAGAAGGCACTTACATACCCTGGGGTAAAGTAGCATCTGCAGTGGACAATCGGACCAAGATACAAGTCTACAACAAATATATGAGAATGCTGCATCAAAGAAAGGGAAGGTTTTTAGAAGAAGAAGATGTAGTCTTAATAAACTGTTATGAAAAATATGGGagtaattttaagaaaatagcACAGTTTCTTCCTGGCCGATCTGTTGTGCAGCTCAAGACTCGCTATCAAATATTGACTAAGTTCCGTGTCTCCACAACATGGACTGTGGATGATGACAAAAAGCTTTTACAACTCATGGCTAATCAGGACTCAAGTATCAGCTTTGCAAGCACTACAAGGCATTTCCCAGGAAAGGACCGTACAAATATACGCTCAAGGTATGTGACATTGATGAAATGGATGAAGGCCCATCCGACCTGCGACATTAGCCTCGCTCCGCGCCGCGGCGCACGCCGACTCATCCACGGCCTTGCAGAAGTCAACTTGAATGAGGCTATTGCCAATTTAAACAAAAGACTTGAATCAGAAGTAAACACTAagaaaaagaataaaattacattagaaTCTAGAGAAGACGAAATTGAAGCTGGCATTATGGCTGCACTTGTAAATGAGATCGTAGTAGAAGAATCTGGTAGAAAACCCAGCCAGCAAGACCTAGACGACGAAGAAGTGGTCACCCCTCATGGTAACATGTTACCAAATAATGTAACAAATCTACGTAACTTACTTATACTGTTCAATGCAGCATTGGATAAAGAAGCTTTTGAACACAGCAAATATAATACAGAATTCCCAGGTTTACGTGAAACAGATCAAAAAGATTCAATTGTGAGAGTAAAATCTTACTCGAAAACAAAGACTGTGCAAACAATAGAAATGGATAAGTTCCCAGATATATGGGGCAAACAAACAGTGGTCAAACCGGTGACCTATGTTCTACCACCAAATTATGCTACAATAACTGGCTGCAGAGTGCTCATGAAGCATTATGGTACCAAACCAGATGATGACATCAATTTAAGTGTGATGCAACGGCATAACAATTTTCTAAAACAAGCCATAGACACTATTAAGCAAAGATTTACAGCACTGTTTTTGTGGCCCATGTTACTCTCTAACGAAATGCCAAATGTTAATCAGACACCATATGTGTCACCCATAAaggtagaaaaaaaattactccCTAATCCAAAGGGTGTTACGATTCCGCATCCTAAGAAATGCCAAATGAATTTCCATAAGAAACCAAGTCAGCTGTAcagatatgatgatgatgatgatgacgatgaagatGAAGAGATTAATGCACCAAAACGgcgcaaaaaaaaagatttaaagaaAATTCAGTACTTTACAAAGATGCCATTGAAACCTATGTAtagcaaacataaaaatatatttggttCAGATGAAAGTGATTTTGATTAA
Protein Sequence
MEPANIEDSETSESDDNADILVAEYLNDTRVESVLATRRHQEPAYTLEQLDDINLYKNAIALNRETEAKYKKLEDSLTRMLTEVRKRLKDNEAALLKHSHNHNEGEYNYFRCGKPYFKDSSNFCPPDNEDTIMMRQSEMYDFSHVASVPGWTINDKGELVNALLEVSRDIKTSELKSEIARLRKDNKNLMKIAKLEQEIKHLNKKTLAEIALPIEQEYDWEQLADTMNQRHTAQEYRALWKLFFHPSINKSSWTKPEHKELQKIAFANYMQDWDSIAKQLNTGRTGYQCFVYYRTNLTSSPSNRKWTPEEIEYLQRVVDYFREGTYIPWGKVASAVDNRTKIQVYNKYMRMLHQRKGRFLEEEDVVLINCYEKYGSNFKKIAQFLPGRSVVQLKTRYQILTKFRVSTTWTVDDDKKLLQLMANQDSSISFASTTRHFPGKDRTNIRSRYVTLMKWMKAHPTCDISLAPRRGARRLIHGLAEVNLNEAIANLNKRLESEVNTKKKNKITLESREDEIEAGIMAALVNEIVVEESGRKPSQQDLDDEEVVTPHGNMLPNNVTNLRNLLILFNAALDKEAFEHSKYNTEFPGLRETDQKDSIVRVKSYSKTKTVQTIEMDKFPDIWGKQTVVKPVTYVLPPNYATITGCRVLMKHYGTKPDDDINLSVMQRHNNFLKQAIDTIKQRFTALFLWPMLLSNEMPNVNQTPYVSPIKVEKKLLPNPKGVTIPHPKKCQMNFHKKPSQLYRYDDDDDDDEDEEINAPKRRKKKDLKKIQYFTKMPLKPMYSKHKNIFGSDESDFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00634420;
90% Identity
-
80% Identity
-