Egri006947.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ectropis grisescens
Gene Symbol
-
Assembly
GCA_017562165.1
Location
chr17:20589410-20642252[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-07 0.00012 21.8 0.0 2 38 15 52 14 56 0.89

Sequence Information

Coding Sequence
atggttagaacatataaaaaaaagcgGGAAAGTACAGTTAATGAAGACGATGTATTAAAAGCAGTTTTAAACGTCATAAACGGAACTATGAAACTTAGGAGAGCTGCTACTATATATGGGTTGACGCCGAGCACACTCTTTTATCGAGTTAAAAAGTATAAAGAAAACATAGCTCCTAGGAGTGAAGTATTTTCAAGTAAATACACTGTTGCTCAGATATTTACCAATGACGAGGAAAAACTGTTGGAAAAATACCTCTTGAAAAGATCAAAAATGAACTATGGCCTCACCTACACAAGTGCAAGATCGTTAGCTTTTGAATATGCAACAGCTTTACGTAAATGTCCAGCAAAATGGACGGAAAATACACAGGCAGGCATAGAGTGGATGAAAGGATTTATGAAAAGGCACAAAAATTTGTCTTTGCGAAAGCCTGAGAACACGAGTCTTTCACGTTCGACAAGTTTTAATAAGCACAACGTGTCCATGTTTTACGATAATTATGAAAGGGTTCTGCAAAAGACCCACTTTACTCCAGACCGAATTTTCAATTTGGATGAGACCAATATTATGACAGTGGTGCAAGCACCTAATGTAATTGCGCAGACTGGTTCAAAGCAGGTAAGTCAGTGTGTGTCAGCAGAGAGAGGCCAGCTGATAACAATGTGCGCCATAGTCAGTGCAACAGGTAATACCGTTCCACCAGTTTTCATATTTCCGCGAGCACGATTTCATGATGTTATGATTAATGGAGCGCCACCTGGAAGCGTTGGTTATGCAAATAGTCCAAAAAGCGGATGGATGACCGGCCCTTTGTTTGTTAAGGTGCtgcaacatataaaaaaatccacAAGATGTAGTAAAGAtgacaaaatattgttattatttgacaatcATGAAAGTCATTGTTCTTTAGATGCAATCAATTACTGTCGAGACAATGGTATTGTTGTACTCACATTCCCCCCCCATTGCACACATCAGATGCAACCCCTAGATGTTGCCGTCAATGGgccatttaaacaaaaaatttcaGTGGCACAAAATAATTGGCTGCTCGAACATCCTGGGAGAACCATCACAATCCATGATCTAGCAGGTATTGTGACTCCAGCATATAATGCTTCTCATACgcctaataatataatttcggGGTTTTCAAAACCAGGAATCTACCCACTTAACCGTAATGCATTTACAGACGATGATTTTCAGTGTGCAGAAGTCACGAATCGTCCTCAACTTAATGTATTTGCTGAGAATGAGAGCCCCATAGCAGCTACTGCTTTACTTGATATCCCTGATATTATTCAGCCAACAGTAGCTTTACAAAGAGAGTCACATCCGCCACAAACTCCAACAGAAGCTTCACAAAGAGGGCCACAAACGCCACAAATATCGCCTAGGGTAGAAGACATAGATCAGAGATTCTTTAGTCCGAGTATTTATGATCACAGTAAAGACAATATTAATGAAATGTCTGGTGAAGTACCCGGTCCCGTAACTCCGGAAATGATTAAACCTTATCCTAAAGCCCCGCCACGTAAAAATTGCGCAACAGGACGAAAAAAAGGAAGTTCGCGCATCTTGACTGACACTCCAGAGAAGAATGCAATCGAAGCAGCACATTTAAATCGGATGAAAAAATTAGAAAAGCCTGCTATTCGTCGACGTACAAAAGAAGGCAAGCCAAATACCAAAGTAAAGAAACCTAGAAAAGGCAAGCAACTTCCTAAAGGCAAATCTAAATCAAAAAAGAGTTCTATATTCACATCAAGCTCTGAATCTGATGATCATGACAGTCACTTCTCCATGAATGACGACACAGACTTGGATGCGACTGATGCCAGTAGCAGTCAACATGAAGATGAAGAACTGCAGGATCCAGTTCACAATACTAATTTTACTAGCGGAAATCTGAAAAAGAAGGAACCTTCCACGCACGAGCTGCTCAGCTCCCTGGGGCTGAAGAAGTTGAGGATACCGGCCGCTCACCACCGGAAGCGTGATTCCCGTATGTACGTGATCAAGCTTCCTCCCAACACCTCGTACTACACACGCCCCGAGCCCGCGCCTGCTGCGGCCAGGACCTTGCCTCTCCAGATGACCAGCAACGGGAAACCGGCGCGAGTCTACCACTGGAACATACCAGTTCTACAGAAATTCGCCAAGAACCGACCTCAAGCGAGATCCGACGACGACGTGGTGGACGTCGAAAGTACTCCAACTTGGCCCAAAGGCCTCAACAACCACCCCAACTCCTTAGACGCGCTGGCGTACTACGTCCCCGCGAAAAAGAATTCTTTCCGAAAATACTTTTCAGGAAACGGGAAGCCGAAGTCTTTTTATGTTCTAGAAAAGAATAAGAAGACCGCCGAATATCATAAGCTGTTGCCGTAA
Protein Sequence
MVRTYKKKRESTVNEDDVLKAVLNVINGTMKLRRAATIYGLTPSTLFYRVKKYKENIAPRSEVFSSKYTVAQIFTNDEEKLLEKYLLKRSKMNYGLTYTSARSLAFEYATALRKCPAKWTENTQAGIEWMKGFMKRHKNLSLRKPENTSLSRSTSFNKHNVSMFYDNYERVLQKTHFTPDRIFNLDETNIMTVVQAPNVIAQTGSKQVSQCVSAERGQLITMCAIVSATGNTVPPVFIFPRARFHDVMINGAPPGSVGYANSPKSGWMTGPLFVKVLQHIKKSTRCSKDDKILLLFDNHESHCSLDAINYCRDNGIVVLTFPPHCTHQMQPLDVAVNGPFKQKISVAQNNWLLEHPGRTITIHDLAGIVTPAYNASHTPNNIISGFSKPGIYPLNRNAFTDDDFQCAEVTNRPQLNVFAENESPIAATALLDIPDIIQPTVALQRESHPPQTPTEASQRGPQTPQISPRVEDIDQRFFSPSIYDHSKDNINEMSGEVPGPVTPEMIKPYPKAPPRKNCATGRKKGSSRILTDTPEKNAIEAAHLNRMKKLEKPAIRRRTKEGKPNTKVKKPRKGKQLPKGKSKSKKSSIFTSSSESDDHDSHFSMNDDTDLDATDASSSQHEDEELQDPVHNTNFTSGNLKKKEPSTHELLSSLGLKKLRIPAAHHRKRDSRMYVIKLPPNTSYYTRPEPAPAAARTLPLQMTSNGKPARVYHWNIPVLQKFAKNRPQARSDDDVVDVESTPTWPKGLNNHPNSLDALAYYVPAKKNSFRKYFSGNGKPKSFYVLEKNKKTAEYHKLLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01490073;
90% Identity
iTF_01118248; iTF_01118255; iTF_01221493; iTF_01221494; iTF_01507160; iTF_01490074; iTF_01490070;
80% Identity
-