Egri008093.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr24:7201600-7202688[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6 2e+03 -1.4 0.3 17 25 1 9 1 9 0.90 2 2 2e-07 6.3e-05 22.6 0.0 1 40 26 65 26 70 0.90
Sequence Information
- Coding Sequence
- ATGTCTCAACTAAGAGCAAGCCGAAAGATTAATACTGGAAAGATGCCACCGACAAAAGGAAATTTTAGGAATTATACACAAGAGGCTATGGAAGCAGCGGTAGAAGATGTACGTTTACATAAAACTCCTTATAAGACTGCTGCAAAAAAATTTAACGTACCAAGGATTACACTAAAGTACAaggttgaaggaaaacatccaaTTGACCGaaaaatggGGCCACCAGCCGTATTGAGTAGAACAGAGGAAAAAACTATTGTAGATTGGATTTTTGAAATGGCCCGTGCAGGATTTCCCGTCACTATGAAGGAGGTTGTCTTTAGTGTGCAGCGTCtattaacagaattaaaaaaggCCGAATCCGTTTAA
- Protein Sequence
- MSQLRASRKINTGKMPPTKGNFRNYTQEAMEAAVEDVRLHKTPYKTAAKKFNVPRITLKYKVEGKHPIDRKMGPPAVLSRTEEKTIVDWIFEMARAGFPVTMKEVVFSVQRLLTELKKAESV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922818;
- 90% Identity
- -
- 80% Identity
- -